RNA–Protein interactions for RNA: ENST00000409836.3

GYPC-203, Transcript of glycophorin C (Gerbich blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GYPC, Length 932 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-203ENST00000409836 PNNQ9H307 717 aaKnown RBP18.64■□□□□ 0.57
GYPC-203ENST00000409836 LRRC4BQ9NT99 713 aa18.64■□□□□ 0.57
GYPC-203ENST00000409836 GNAT3A8MTJ3 354 aa18.63■□□□□ 0.57
GYPC-203ENST00000409836 HTATSF1O43719 755 aaKnown RBP18.63■□□□□ 0.57
GYPC-203ENST00000409836 SLC52A2Q9HAB3 445 aa18.63■□□□□ 0.57
GYPC-203ENST00000409836 ANO8Q9HCE9 1232 aaPredicted RBP18.63■□□□□ 0.57
GYPC-203ENST00000409836 HMGB2P26583 209 aaKnown RBP18.62■□□□□ 0.57
GYPC-203ENST00000409836 KDM3BQ7LBC6 1761 aa18.62■□□□□ 0.57
GYPC-203ENST00000409836 ANP32CO43423 234 aa18.61■□□□□ 0.57
GYPC-203ENST00000409836 ATG3Q9NT62 314 aa18.61■□□□□ 0.57
GYPC-203ENST00000409836 CABP4P57796 275 aa18.6■□□□□ 0.57
GYPC-203ENST00000409836 ASAP1Q9ULH1 1129 aa18.6■□□□□ 0.57
GYPC-203ENST00000409836 NBPF14Q5TI25 921 aa18.59■□□□□ 0.57
GYPC-203ENST00000409836 IL17REQ8NFR9 667 aa18.59■□□□□ 0.57
GYPC-203ENST00000409836 AKT1S1Q96B36 256 aa18.59■□□□□ 0.57
GYPC-203ENST00000409836 LGR6Q9HBX8 967 aa18.59■□□□□ 0.57
GYPC-203ENST00000409836 CCNL1Q9UK58 526 aaPredicted RBP18.59■□□□□ 0.57
GYPC-203ENST00000409836 SRCAPQ6ZRS2 3230 aa18.58■□□□□ 0.57
GYPC-203ENST00000409836 LOC102724428A0A0B4J2F2 783 aa18.58■□□□□ 0.56
GYPC-203ENST00000409836 SIK1P57059 783 aa18.58■□□□□ 0.56
GYPC-203ENST00000409836 NFE2L2Q16236 605 aa18.58■□□□□ 0.56
GYPC-203ENST00000409836 MYH14Q7Z406 1995 aaKnown RBP18.57■□□□□ 0.56
GYPC-203ENST00000409836 WDR43Q15061 677 aaKnown RBP eCLIP18.57■□□□□ 0.56
GYPC-203ENST00000409836 SLC15A2Q16348 729 aa18.57■□□□□ 0.56
GYPC-203ENST00000409836 NFATC2IPQ8NCF5 419 aa18.57■□□□□ 0.56
GYPC-203ENST00000409836 MAPK8IP3Q9UPT6 1336 aa18.56■□□□□ 0.56
GYPC-203ENST00000409836 NEFMP07197 916 aa18.56■□□□□ 0.56
GYPC-203ENST00000409836 LAMB4A4D0S4 1761 aa18.55■□□□□ 0.56
GYPC-203ENST00000409836 R3HDM1Q15032 1099 aaKnown RBP18.55■□□□□ 0.56
GYPC-203ENST00000409836 ZNF827Q17R98 1081 aa18.55■□□□□ 0.56
GYPC-203ENST00000409836 ADAMTS8Q9UP79 889 aa18.55■□□□□ 0.56
GYPC-203ENST00000409836 CCDC184Q52MB2 194 aa18.54■□□□□ 0.56
GYPC-203ENST00000409836 RUNDC1Q96C34 613 aa18.54■□□□□ 0.56
GYPC-203ENST00000409836 SLC4A9Q96Q91 983 aa18.54■□□□□ 0.56
GYPC-203ENST00000409836 STK32BQ9NY57 414 aa18.54■□□□□ 0.56
GYPC-203ENST00000409836 C4AP0C0L4 1744 aa18.54■□□□□ 0.56
GYPC-203ENST00000409836 PNISRQ8TF01 805 aaKnown RBP18.53■□□□□ 0.56
GYPC-203ENST00000409836 TEFQ10587 303 aa18.52■□□□□ 0.56
GYPC-203ENST00000409836 ITPK1Q13572 414 aa18.52■□□□□ 0.56
GYPC-203ENST00000409836 VSIG10Q8N0Z9 540 aa18.52■□□□□ 0.56
GYPC-203ENST00000409836 RTF1Q92541 710 aaKnown RBP18.52■□□□□ 0.56
GYPC-203ENST00000409836 CNTNAP4Q9C0A0 1308 aa18.51■□□□□ 0.55
GYPC-203ENST00000409836 PSDA5PKW4 1024 aaPredicted RBP18.51■□□□□ 0.55
GYPC-203ENST00000409836 TMPOP42166 694 aaKnown RBP18.51■□□□□ 0.55
GYPC-203ENST00000409836 PNPLA7Q6ZV29 1317 aa18.5■□□□□ 0.55
GYPC-203ENST00000409836 KCNQ4P56696 695 aa18.5■□□□□ 0.55
GYPC-203ENST00000409836 LMOD3Q0VAK6 560 aa18.5■□□□□ 0.55
GYPC-203ENST00000409836 LINC00116Q8NCU8 138 aa18.5■□□□□ 0.55
GYPC-203ENST00000409836 ZNF790Q6PG37 636 aa18.49■□□□□ 0.55
GYPC-203ENST00000409836 MCM10Q7L590 875 aa18.49■□□□□ 0.55
GYPC-203ENST00000409836 MRS2Q9HD23 443 aa18.49■□□□□ 0.55
GYPC-203ENST00000409836 HEG1Q9ULI3 1381 aa18.48■□□□□ 0.55
GYPC-203ENST00000409836 ATP6V1AP38606 617 aa18.48■□□□□ 0.55
GYPC-203ENST00000409836 NCBP3Q53F19 620 aaKnown RBP18.48■□□□□ 0.55
GYPC-203ENST00000409836 RC3H1Q5TC82 1133 aaKnown RBP18.48■□□□□ 0.55
GYPC-203ENST00000409836 SSFA2P28290 1259 aa18.46■□□□□ 0.55
GYPC-203ENST00000409836 CCDC146Q8IYE0 955 aa18.46■□□□□ 0.55
GYPC-203ENST00000409836 BABAM1Q9NWV8 329 aa18.46■□□□□ 0.55
GYPC-203ENST00000409836 PTCD1O75127 700 aaKnown RBP18.45■□□□□ 0.54
GYPC-203ENST00000409836 RIPK4P57078 832 aa18.45■□□□□ 0.54
GYPC-203ENST00000409836 SLC39A6Q13433 755 aa18.45■□□□□ 0.54
GYPC-203ENST00000409836 DCTN1Q14203 1278 aa18.45■□□□□ 0.54
GYPC-203ENST00000409836 FLAD1Q8NFF5 587 aa18.45■□□□□ 0.54
GYPC-203ENST00000409836 SLC16A10Q8TF71 515 aa18.45■□□□□ 0.54
GYPC-203ENST00000409836 TRIM35Q9UPQ4 493 aa18.45■□□□□ 0.54
GYPC-203ENST00000409836 BTBD11A6QL63 1104 aa18.44■□□□□ 0.54
GYPC-203ENST00000409836 TAF7Q15545 349 aaPredicted RBP18.44■□□□□ 0.54
GYPC-203ENST00000409836 TTC5Q8N0Z6 440 aa18.44■□□□□ 0.54
GYPC-203ENST00000409836 ZNF496Q96IT1 587 aaPredicted RBP18.44■□□□□ 0.54
GYPC-203ENST00000409836 RBM42Q9BTD8 480 aaKnown RBP18.44■□□□□ 0.54
GYPC-203ENST00000409836 TFCP2L1Q9NZI6 479 aa18.44■□□□□ 0.54
GYPC-203ENST00000409836 SCN7AQ01118 1682 aa18.44■□□□□ 0.54
GYPC-203ENST00000409836 CCER2I3L3R5 266 aa18.43■□□□□ 0.54
GYPC-203ENST00000409836 ADRA2BP18089 450 aa18.43■□□□□ 0.54
GYPC-203ENST00000409836 AMIGO3Q86WK7 504 aa18.43■□□□□ 0.54
GYPC-203ENST00000409836 AK7Q96M32 723 aa18.43■□□□□ 0.54
GYPC-203ENST00000409836 PDGFDQ9GZP0 370 aaPredicted RBP18.43■□□□□ 0.54
GYPC-203ENST00000409836 FMNL2Q96PY5 1086 aa18.42■□□□□ 0.54
GYPC-203ENST00000409836 SGIP1Q9BQI5 828 aa18.42■□□□□ 0.54
GYPC-203ENST00000409836 MTFR1LQ9H019 292 aa18.42■□□□□ 0.54
GYPC-203ENST00000409836 BCORQ6W2J9 1755 aa18.42■□□□□ 0.54
GYPC-203ENST00000409836 CYP19A1P11511 503 aaPredicted RBP18.41■□□□□ 0.54
GYPC-203ENST00000409836 CRKLP46109 303 aaKnown RBP18.41■□□□□ 0.54
GYPC-203ENST00000409836 CCDC27Q2M243 656 aa18.41■□□□□ 0.54
GYPC-203ENST00000409836 APAF1O14727 1248 aa18.4■□□□□ 0.54
GYPC-203ENST00000409836 RPS6KA4O75676 772 aa18.4■□□□□ 0.54
GYPC-203ENST00000409836 DNAJC10Q8IXB1 793 aa18.4■□□□□ 0.54
GYPC-203ENST00000409836 THUMPD2Q9BTF0 503 aaKnown RBP18.4■□□□□ 0.54
GYPC-203ENST00000409836 TEX13AQ9BXU3 409 aaPredicted RBP18.4■□□□□ 0.54
GYPC-203ENST00000409836 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.39■□□□□ 0.53
GYPC-203ENST00000409836 GNPATO15228 680 aa18.39■□□□□ 0.53
GYPC-203ENST00000409836 KCNQ3O43525 872 aa18.39■□□□□ 0.53
GYPC-203ENST00000409836 PTGER2P43116 358 aa18.39■□□□□ 0.53
GYPC-203ENST00000409836 INTS5Q6P9B9 1019 aaKnown RBP18.39■□□□□ 0.53
GYPC-203ENST00000409836 COL23A1Q86Y22 540 aaPredicted RBP18.39■□□□□ 0.53
GYPC-203ENST00000409836 SPON1Q9HCB6 807 aa18.39■□□□□ 0.53
GYPC-203ENST00000409836 RRP7AQ9Y3A4 280 aaKnown RBP18.39■□□□□ 0.53
GYPC-203ENST00000409836 CCDC87Q9NVE4 849 aa18.38■□□□□ 0.53
GYPC-203ENST00000409836 SOS1Q07889 1333 aaPredicted RBP18.38■□□□□ 0.53
GYPC-203ENST00000409836 CHL1O00533 1208 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms