RNA–Protein interactions for RNA: ENST00000409777.5

CUL3-204, Transcript of cullin 3, humanhuman

TSL 1 (best) BASIC

Gene CUL3, Length 3,147 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-204ENST00000409777 TNPO1Q92973 898 aaKnown RBP3.94□□□□□ -1.78
CUL3-204ENST00000409777 EIF2AK3Q9NZJ5 1116 aaKnown RBP3.94□□□□□ -1.78
CUL3-204ENST00000409777 RIMS1Q86UR5 1692 aaKnown RBP3.94□□□□□ -1.78
CUL3-204ENST00000409777 ALKQ9UM73 1620 aa3.94□□□□□ -1.78
CUL3-204ENST00000409777 ATP10DQ9P241 1426 aa3.94□□□□□ -1.78
CUL3-204ENST00000409777 FAM208AQ9UK61 1670 aaKnown RBP3.94□□□□□ -1.78
CUL3-204ENST00000409777 MLLT3P42568 568 aaPredicted RBP3.94□□□□□ -1.78
CUL3-204ENST00000409777 IFFO2Q5TF58 517 aa3.94□□□□□ -1.78
CUL3-204ENST00000409777 SLKQ9H2G2 1235 aaPredicted RBP3.94□□□□□ -1.78
CUL3-204ENST00000409777 GPHNQ9NQX3 736 aaPredicted RBP3.94□□□□□ -1.78
CUL3-204ENST00000409777 NEO1Q92859 1461 aa3.94□□□□□ -1.78
CUL3-204ENST00000409777 SPDYE16A6NNV3 312 aaPredicted RBP3.93□□□□□ -1.78
CUL3-204ENST00000409777 ZNF853P0CG23 659 aa3.93□□□□□ -1.78
CUL3-204ENST00000409777 MTHFSP49914 203 aa3.93□□□□□ -1.78
CUL3-204ENST00000409777 MORC1Q86VD1 984 aa3.93□□□□□ -1.78
CUL3-204ENST00000409777 SSH1Q8WYL5 1049 aa3.93□□□□□ -1.78
CUL3-204ENST00000409777 FMN2Q9NZ56 1722 aa3.93□□□□□ -1.78
CUL3-204ENST00000409777 ZNF500O60304 480 aaPredicted RBP3.93□□□□□ -1.78
CUL3-204ENST00000409777 OFD1O75665 1012 aa3.93□□□□□ -1.78
CUL3-204ENST00000409777 TMPOP42166 694 aaKnown RBP3.93□□□□□ -1.78
CUL3-204ENST00000409777 CCDC173Q0VFZ6 552 aa3.93□□□□□ -1.78
CUL3-204ENST00000409777 KLHL40Q2TBA0 621 aa3.93□□□□□ -1.78
CUL3-204ENST00000409777 AFAP1Q8N556 730 aa3.93□□□□□ -1.78
CUL3-204ENST00000409777 PNNQ9H307 717 aaKnown RBP3.93□□□□□ -1.78
CUL3-204ENST00000409777 ATAD2Q6PL18 1390 aa3.93□□□□□ -1.78
CUL3-204ENST00000409777 ZBTB7BO15156 539 aaPredicted RBP3.92□□□□□ -1.78
CUL3-204ENST00000409777 CHD1LQ86WJ1 897 aa3.92□□□□□ -1.78
CUL3-204ENST00000409777 GCC1Q96CN9 775 aa3.92□□□□□ -1.78
CUL3-204ENST00000409777 CFAP53Q96M91 514 aa3.92□□□□□ -1.78
CUL3-204ENST00000409777 DIP2AQ14689 1571 aa3.92□□□□□ -1.78
CUL3-204ENST00000409777 AATKQ6ZMQ8 1374 aa3.92□□□□□ -1.78
CUL3-204ENST00000409777 CPS1P31327 1500 aa3.92□□□□□ -1.78
CUL3-204ENST00000409777 EIF5BO60841 1220 aaKnown RBP3.92□□□□□ -1.78
CUL3-204ENST00000409777 HSCBQ8IWL3 235 aa3.92□□□□□ -1.78
CUL3-204ENST00000409777 KRI1Q8N9T8 703 aaKnown RBP3.92□□□□□ -1.78
CUL3-204ENST00000409777 SLC12A5Q9H2X9 1139 aa3.92□□□□□ -1.78
CUL3-204ENST00000409777 CHD2O14647 1828 aaKnown RBP3.92□□□□□ -1.78
CUL3-204ENST00000409777 EVC2Q86UK5 1308 aa3.92□□□□□ -1.78
CUL3-204ENST00000409777 K7ELQ4 463 aaPredicted RBP3.92□□□□□ -1.78
CUL3-204ENST00000409777 CD2BP2O95400 341 aaKnown RBP3.92□□□□□ -1.78
CUL3-204ENST00000409777 HSP90AB1P08238 724 aaKnown RBP3.92□□□□□ -1.78
CUL3-204ENST00000409777 EXOSC9Q06265 439 aaKnown RBP3.92□□□□□ -1.78
CUL3-204ENST00000409777 SIRT2Q8IXJ6 389 aa3.92□□□□□ -1.78
CUL3-204ENST00000409777 TMEM57Q8N5G2 664 aa3.92□□□□□ -1.78
CUL3-204ENST00000409777 GBP4Q96PP9 640 aa3.92□□□□□ -1.78
CUL3-204ENST00000409777 PEAK1Q9H792 1746 aa3.91□□□□□ -1.78
CUL3-204ENST00000409777 PPP1R15BQ5SWA1 713 aa3.91□□□□□ -1.78
CUL3-204ENST00000409777 MRPL50Q8N5N7 158 aaKnown RBP3.91□□□□□ -1.78
CUL3-204ENST00000409777 PDCL3Q9H2J4 239 aa3.91□□□□□ -1.78
CUL3-204ENST00000409777 ZSWIM6Q9HCJ5 1215 aa3.91□□□□□ -1.78
CUL3-204ENST00000409777 CACNA1FO60840 1977 aa3.91□□□□□ -1.78
CUL3-204ENST00000409777 MARF1Q9Y4F3 1742 aaKnown RBP3.91□□□□□ -1.78
CUL3-204ENST00000409777 AGLP35573 1532 aa3.91□□□□□ -1.78
CUL3-204ENST00000409777 CANXP27824 592 aaKnown RBP3.91□□□□□ -1.78
CUL3-204ENST00000409777 MCM5P33992 734 aa3.91□□□□□ -1.78
CUL3-204ENST00000409777 RIPK4P57078 832 aa3.91□□□□□ -1.78
CUL3-204ENST00000409777 ZSCAN30Q86W11 494 aa3.91□□□□□ -1.78
CUL3-204ENST00000409777 GPIHBP1Q8IV16 184 aa3.91□□□□□ -1.78
CUL3-204ENST00000409777 RETREG2Q8NC44 543 aa3.91□□□□□ -1.78
CUL3-204ENST00000409777 SLAIN1Q8ND83 568 aa3.91□□□□□ -1.78
CUL3-204ENST00000409777 NOB1Q9ULX3 412 aaKnown RBP3.91□□□□□ -1.78
CUL3-204ENST00000409777 RRP7AQ9Y3A4 280 aaKnown RBP3.91□□□□□ -1.78
CUL3-204ENST00000409777 AK9Q5TCS8 1911 aa3.91□□□□□ -1.78
CUL3-204ENST00000409777 TECPR2O15040 1411 aa3.91□□□□□ -1.78
CUL3-204ENST00000409777 KIF3CO14782 793 aa3.9□□□□□ -1.78
CUL3-204ENST00000409777 IPO8O15397 1037 aaKnown RBP3.9□□□□□ -1.78
CUL3-204ENST00000409777 FCHSD2O94868 740 aa3.9□□□□□ -1.78
CUL3-204ENST00000409777 HSP90AA1P07900 732 aaKnown RBP3.9□□□□□ -1.78
CUL3-204ENST00000409777 MFAP1P55081 439 aaKnown RBP3.9□□□□□ -1.78
CUL3-204ENST00000409777 CALD1Q05682 793 aaKnown RBP3.9□□□□□ -1.78
CUL3-204ENST00000409777 IRF5Q13568 498 aa3.9□□□□□ -1.78
CUL3-204ENST00000409777 PDIA6Q15084 440 aa3.9□□□□□ -1.78
CUL3-204ENST00000409777 TBC1D9Q6ZT07 1266 aa3.9□□□□□ -1.78
CUL3-204ENST00000409777 FAM163AQ96GL9 167 aaPredicted RBP3.9□□□□□ -1.78
CUL3-204ENST00000409777 CHMP4BQ9H444 224 aaKnown RBP3.9□□□□□ -1.78
CUL3-204ENST00000409777 LMBRD1Q9NUN5 540 aa3.9□□□□□ -1.78
CUL3-204ENST00000409777 NOL7Q9UMY1 257 aaKnown RBP3.9□□□□□ -1.78
CUL3-204ENST00000409777 KIAA0232Q92628 1395 aa3.9□□□□□ -1.79
CUL3-204ENST00000409777 KIF3BO15066 747 aa3.9□□□□□ -1.79
CUL3-204ENST00000409777 BAG4O95429 457 aaKnown RBP3.9□□□□□ -1.79
CUL3-204ENST00000409777 FOXK1P85037 733 aa3.9□□□□□ -1.79
CUL3-204ENST00000409777 PDCD7Q8N8D1 485 aaKnown RBP3.9□□□□□ -1.79
CUL3-204ENST00000409777 GAS2L2Q8NHY3 880 aa3.9□□□□□ -1.79
CUL3-204ENST00000409777 TSR2Q969E8 191 aaKnown RBP3.9□□□□□ -1.79
CUL3-204ENST00000409777 POM121Q96HA1 1249 aa3.9□□□□□ -1.79
CUL3-204ENST00000409777 GZF1Q9H116 711 aaPredicted RBP3.9□□□□□ -1.79
CUL3-204ENST00000409777 SMC4Q9NTJ3 1288 aa3.9□□□□□ -1.79
CUL3-204ENST00000409777 RTL1A6NKG5 1358 aa3.9□□□□□ -1.79
CUL3-204ENST00000409777 FYB1O15117 783 aa3.9□□□□□ -1.79
CUL3-204ENST00000409777 ST18O60284 1047 aa3.9□□□□□ -1.79
CUL3-204ENST00000409777 VAMP4O75379 141 aa3.9□□□□□ -1.79
CUL3-204ENST00000409777 GSPT1P15170 499 aaKnown RBP3.9□□□□□ -1.79
CUL3-204ENST00000409777 HSP90AA2PQ14568 343 aaPredicted RBP3.9□□□□□ -1.79
CUL3-204ENST00000409777 GLIPR1L2Q4G1C9 344 aa3.9□□□□□ -1.79
CUL3-204ENST00000409777 TMCO4Q5TGY1 634 aa3.9□□□□□ -1.79
CUL3-204ENST00000409777 CDAN1Q8IWY9 1227 aa3.9□□□□□ -1.79
CUL3-204ENST00000409777 PKNOX2Q96KN3 472 aa3.9□□□□□ -1.79
CUL3-204ENST00000409777 PLSCR2Q9NRY7 297 aa3.9□□□□□ -1.79
CUL3-204ENST00000409777 IFT57Q9NWB7 429 aa3.9□□□□□ -1.79
CUL3-204ENST00000409777 EDC4Q6P2E9 1401 aaKnown RBP3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms