RNA–Protein interactions for RNA: ENST00000409475.5

PGAP1-204, Transcript of post-GPI attachment to proteins 1, humanhuman

TSL 2 BASIC

Gene PGAP1, Length 2,443 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGAP1-204ENST00000409475 ZNF428Q96B54 188 aa25.41■■□□□ 1.66
PGAP1-204ENST00000409475 MIS18AQ9NYP9 233 aa25.39■■□□□ 1.66
PGAP1-204ENST00000409475 BTBD11A6QL63 1104 aa25.39■■□□□ 1.66
PGAP1-204ENST00000409475 SOS1Q07889 1333 aaPredicted RBP25.39■■□□□ 1.65
PGAP1-204ENST00000409475 ONECUT3O60422 494 aaPredicted RBP25.38■■□□□ 1.65
PGAP1-204ENST00000409475 ZNF772Q68DY9 489 aaPredicted RBP25.38■■□□□ 1.65
PGAP1-204ENST00000409475 QTRT2Q9H974 415 aaKnown RBP25.38■■□□□ 1.65
PGAP1-204ENST00000409475 PAPPAQ13219 1627 aa25.37■■□□□ 1.65
PGAP1-204ENST00000409475 CABP4P57796 275 aa25.37■■□□□ 1.65
PGAP1-204ENST00000409475 RARSP54136 660 aaKnown RBP25.37■■□□□ 1.65
PGAP1-204ENST00000409475 C8orf58Q8NAV2 365 aa25.37■■□□□ 1.65
PGAP1-204ENST00000409475 ITGB4P16144 1822 aa25.36■■□□□ 1.65
PGAP1-204ENST00000409475 VAMP4O75379 141 aa25.36■■□□□ 1.65
PGAP1-204ENST00000409475 TWISTNBQ3B726 338 aaPredicted RBP25.36■■□□□ 1.65
PGAP1-204ENST00000409475 NFATC2IPQ8NCF5 419 aa25.36■■□□□ 1.65
PGAP1-204ENST00000409475 DOT1LQ8TEK3 1739 aa25.35■■□□□ 1.65
PGAP1-204ENST00000409475 ALDH1L2Q3SY69 923 aa25.34■■□□□ 1.65
PGAP1-204ENST00000409475 TSPYL6Q8N831 410 aa25.34■■□□□ 1.65
PGAP1-204ENST00000409475 MARCH10Q8NA82 808 aaPredicted RBP25.34■■□□□ 1.65
PGAP1-204ENST00000409475 EIF4A1P60842 406 aaKnown RBP25.33■■□□□ 1.65
PGAP1-204ENST00000409475 RRP1P56182 461 aaKnown RBP25.33■■□□□ 1.64
PGAP1-204ENST00000409475 UBR2Q8IWV8 1755 aa25.32■■□□□ 1.64
PGAP1-204ENST00000409475 HEG1Q9ULI3 1381 aa25.32■■□□□ 1.64
PGAP1-204ENST00000409475 HOXB7P09629 217 aa25.31■■□□□ 1.64
PGAP1-204ENST00000409475 ZNF790Q6PG37 636 aa25.31■■□□□ 1.64
PGAP1-204ENST00000409475 KRT24Q2M2I5 525 aa25.29■■□□□ 1.64
PGAP1-204ENST00000409475 KCNQ3O43525 872 aa25.29■■□□□ 1.64
PGAP1-204ENST00000409475 BRPF1P55201 1214 aaPredicted RBP25.29■■□□□ 1.64
PGAP1-204ENST00000409475 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.29■■□□□ 1.64
PGAP1-204ENST00000409475 TMOD3Q9NYL9 352 aa25.29■■□□□ 1.64
PGAP1-204ENST00000409475 BCL9O00512 1426 aa25.29■■□□□ 1.64
PGAP1-204ENST00000409475 BCAR3O75815 825 aa25.28■■□□□ 1.64
PGAP1-204ENST00000409475 ELL2O00472 640 aaPredicted RBP25.28■■□□□ 1.64
PGAP1-204ENST00000409475 SSH1Q8WYL5 1049 aa25.28■■□□□ 1.64
PGAP1-204ENST00000409475 NEFLP07196 543 aa25.27■■□□□ 1.64
PGAP1-204ENST00000409475 A0A0G2JS52 829 aa25.27■■□□□ 1.64
PGAP1-204ENST00000409475 RBM6P78332 1123 aaKnown RBP25.27■■□□□ 1.64
PGAP1-204ENST00000409475 MYT1Q01538 1121 aa25.27■■□□□ 1.64
PGAP1-204ENST00000409475 CHMP4AQ9BY43 222 aa25.27■■□□□ 1.64
PGAP1-204ENST00000409475 SEPT12Q8IYM1 358 aa25.26■■□□□ 1.63
PGAP1-204ENST00000409475 TTC5Q8N0Z6 440 aa25.26■■□□□ 1.63
PGAP1-204ENST00000409475 SMC4Q9NTJ3 1288 aa25.26■■□□□ 1.63
PGAP1-204ENST00000409475 KCPQ6ZWJ8 1503 aa25.25■■□□□ 1.63
PGAP1-204ENST00000409475 SLC39A6Q13433 755 aa25.25■■□□□ 1.63
PGAP1-204ENST00000409475 CACNA1FO60840 1977 aa25.24■■□□□ 1.63
PGAP1-204ENST00000409475 PIGBQ92521 554 aa25.24■■□□□ 1.63
PGAP1-204ENST00000409475 MRPL50Q8N5N7 158 aaKnown RBP25.23■■□□□ 1.63
PGAP1-204ENST00000409475 FMNL2Q96PY5 1086 aa25.23■■□□□ 1.63
PGAP1-204ENST00000409475 KIF16BQ96L93 1317 aa25.23■■□□□ 1.63
PGAP1-204ENST00000409475 C5P01031 1676 aa25.23■■□□□ 1.63
PGAP1-204ENST00000409475 LAMB4A4D0S4 1761 aa25.22■■□□□ 1.63
PGAP1-204ENST00000409475 GIGYF1O75420 1035 aaPredicted RBP25.22■■□□□ 1.63
PGAP1-204ENST00000409475 BRWD3Q6RI45 1802 aa25.22■■□□□ 1.63
PGAP1-204ENST00000409475 NHSQ6T4R5 1651 aa25.21■■□□□ 1.63
PGAP1-204ENST00000409475 BCL2L13Q9BXK5 485 aa25.21■■□□□ 1.63
PGAP1-204ENST00000409475 PRIM1P49642 420 aaKnown RBP25.21■■□□□ 1.63
PGAP1-204ENST00000409475 CCDC30Q5VVM6 783 aa25.21■■□□□ 1.63
PGAP1-204ENST00000409475 ZNF496Q96IT1 587 aaPredicted RBP25.21■■□□□ 1.63
PGAP1-204ENST00000409475 PLIN1O60240 522 aa25.18■■□□□ 1.62
PGAP1-204ENST00000409475 SNRPA1P09661 255 aaKnown RBP25.18■■□□□ 1.62
PGAP1-204ENST00000409475 ATG3Q9NT62 314 aa25.18■■□□□ 1.62
PGAP1-204ENST00000409475 RGS17Q9UGC6 210 aaPredicted RBP25.18■■□□□ 1.62
PGAP1-204ENST00000409475 SBF2Q86WG5 1849 aa25.18■■□□□ 1.62
PGAP1-204ENST00000409475 HDGFL1Q5TGJ6 251 aa25.17■■□□□ 1.62
PGAP1-204ENST00000409475 GTF3C3Q9Y5Q9 886 aa25.17■■□□□ 1.62
PGAP1-204ENST00000409475 IPO8O15397 1037 aaKnown RBP25.17■■□□□ 1.62
PGAP1-204ENST00000409475 RXRBP28702 533 aa25.16■■□□□ 1.62
PGAP1-204ENST00000409475 ZKSCAN2Q63HK3 967 aa25.16■■□□□ 1.62
PGAP1-204ENST00000409475 ARHGAP45Q92619 1136 aa25.16■■□□□ 1.62
PGAP1-204ENST00000409475 STK31Q9BXU1 1019 aa25.16■■□□□ 1.62
PGAP1-204ENST00000409475 CANXP27824 592 aaKnown RBP25.16■■□□□ 1.62
PGAP1-204ENST00000409475 PDE3AQ14432 1141 aa25.16■■□□□ 1.62
PGAP1-204ENST00000409475 ERICH6BQ5W0A0 696 aa25.16■■□□□ 1.62
PGAP1-204ENST00000409475 SYTL4Q96C24 671 aaPredicted RBP25.16■■□□□ 1.62
PGAP1-204ENST00000409475 FRAT1Q92837 279 aaPredicted RBP25.15■■□□□ 1.62
PGAP1-204ENST00000409475 ACSBG1Q96GR2 724 aa25.15■■□□□ 1.62
PGAP1-204ENST00000409475 FKBP8Q14318 412 aa25.15■■□□□ 1.62
PGAP1-204ENST00000409475 ASAP1Q9ULH1 1129 aa25.15■■□□□ 1.62
PGAP1-204ENST00000409475 NOB1Q9ULX3 412 aaKnown RBP25.15■■□□□ 1.62
PGAP1-204ENST00000409475 KAT6BQ8WYB5 2073 aa25.14■■□□□ 1.62
PGAP1-204ENST00000409475 CICQ96RK0 1608 aaPredicted RBP25.14■■□□□ 1.62
PGAP1-204ENST00000409475 MS4A1P11836 297 aa25.14■■□□□ 1.62
PGAP1-204ENST00000409475 VSIG10Q8N0Z9 540 aa25.14■■□□□ 1.62
PGAP1-204ENST00000409475 TCERG1O14776 1098 aaKnown RBP25.13■■□□□ 1.61
PGAP1-204ENST00000409475 KRT27Q7Z3Y8 459 aa25.13■■□□□ 1.61
PGAP1-204ENST00000409475 ZNF831Q5JPB2 1677 aa25.12■■□□□ 1.61
PGAP1-204ENST00000409475 ATF7IPQ6VMQ6 1270 aa25.12■■□□□ 1.61
PGAP1-204ENST00000409475 SLC4A2P04920 1241 aa25.12■■□□□ 1.61
PGAP1-204ENST00000409475 PTPRCP08575 1304 aa25.11■■□□□ 1.61
PGAP1-204ENST00000409475 PRAMEF22A3QJZ6 481 aa25.11■■□□□ 1.61
PGAP1-204ENST00000409475 EIF2S2P20042 333 aaKnown RBP25.11■■□□□ 1.61
PGAP1-204ENST00000409475 IRX6P78412 446 aaPredicted RBP25.11■■□□□ 1.61
PGAP1-204ENST00000409475 BTAF1O14981 1849 aa25.11■■□□□ 1.61
PGAP1-204ENST00000409475 SMARCC1Q92922 1105 aaPredicted RBP25.11■■□□□ 1.61
PGAP1-204ENST00000409475 DBF4Q9UBU7 674 aaPredicted RBP25.1■■□□□ 1.61
PGAP1-204ENST00000409475 RGS12O14924 1447 aa25.1■■□□□ 1.61
PGAP1-204ENST00000409475 POTEAQ6S8J7 498 aa25.1■■□□□ 1.61
PGAP1-204ENST00000409475 TEX13AQ9BXU3 409 aaPredicted RBP25.1■■□□□ 1.61
PGAP1-204ENST00000409475 KCNQ2O43526 872 aa25.09■■□□□ 1.61
PGAP1-204ENST00000409475 PTCD1O75127 700 aaKnown RBP25.09■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms