RNA–Protein interactions for RNA: ENST00000409180.1

MRPL35-203, Transcript of mitochondrial ribosomal protein L35, humanhuman

APPRIS ALT1 TSL 3 BASIC

Gene MRPL35, Length 651 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL35-203ENST00000409180 NBPF6Q5VWK0 638 aa9.79□□□□□ -0.84
MRPL35-203ENST00000409180 SMARCC1Q92922 1105 aaPredicted RBP9.79□□□□□ -0.84
MRPL35-203ENST00000409180 NBPF4Q96M43 638 aa9.79□□□□□ -0.84
MRPL35-203ENST00000409180 SLC12A5Q9H2X9 1139 aa9.79□□□□□ -0.84
MRPL35-203ENST00000409180 CD163L1Q9NR16 1453 aa9.79□□□□□ -0.84
MRPL35-203ENST00000409180 PLEKHG2Q9H7P9 1386 aa9.78□□□□□ -0.84
MRPL35-203ENST00000409180 HDGFL2Q7Z4V5 671 aaPredicted RBP9.78□□□□□ -0.84
MRPL35-203ENST00000409180 RAPGEF4Q8WZA2 1011 aa9.78□□□□□ -0.84
MRPL35-203ENST00000409180 RNF181Q9P0P0 153 aa9.78□□□□□ -0.84
MRPL35-203ENST00000409180 KAT6BQ8WYB5 2073 aa9.78□□□□□ -0.84
MRPL35-203ENST00000409180 NSD3Q9BZ95 1437 aa9.77□□□□□ -0.85
MRPL35-203ENST00000409180 LOC102724428A0A0B4J2F2 783 aa9.77□□□□□ -0.85
MRPL35-203ENST00000409180 TATP17735 454 aaPredicted RBP9.77□□□□□ -0.85
MRPL35-203ENST00000409180 SIK1P57059 783 aa9.77□□□□□ -0.85
MRPL35-203ENST00000409180 PIGBQ92521 554 aa9.77□□□□□ -0.85
MRPL35-203ENST00000409180 EDC4Q6P2E9 1401 aaKnown RBP9.76□□□□□ -0.85
MRPL35-203ENST00000409180 C10orf71Q711Q0 1435 aa9.76□□□□□ -0.85
MRPL35-203ENST00000409180 SPDYE4A6NLX3 237 aa9.76□□□□□ -0.85
MRPL35-203ENST00000409180 CYP27B1O15528 508 aa9.76□□□□□ -0.85
MRPL35-203ENST00000409180 KCNA3P22001 575 aa9.76□□□□□ -0.85
MRPL35-203ENST00000409180 ITPK1Q13572 414 aa9.76□□□□□ -0.85
MRPL35-203ENST00000409180 C5P01031 1676 aa9.76□□□□□ -0.85
MRPL35-203ENST00000409180 CGNL1Q0VF96 1302 aa9.76□□□□□ -0.85
MRPL35-203ENST00000409180 PCDH11XQ9BZA7 1347 aa9.76□□□□□ -0.85
MRPL35-203ENST00000409180 PCDH11YQ9BZA8 1340 aa9.76□□□□□ -0.85
MRPL35-203ENST00000409180 C4BP0C0L5 1744 aa9.76□□□□□ -0.85
MRPL35-203ENST00000409180 USP54Q70EL1 1684 aa9.75□□□□□ -0.85
MRPL35-203ENST00000409180 TMF1P82094 1093 aa9.75□□□□□ -0.85
MRPL35-203ENST00000409180 L3MBTL2Q969R5 705 aa9.75□□□□□ -0.85
MRPL35-203ENST00000409180 CCDC87Q9NVE4 849 aa9.75□□□□□ -0.85
MRPL35-203ENST00000409180 TOGARAM1Q9Y4F4 1720 aa9.75□□□□□ -0.85
MRPL35-203ENST00000409180 A0A1W2PP64 1363 aa9.75□□□□□ -0.85
MRPL35-203ENST00000409180 ROCK2O75116 1388 aaKnown RBP9.75□□□□□ -0.85
MRPL35-203ENST00000409180 FAM208AQ9UK61 1670 aaKnown RBP9.74□□□□□ -0.85
MRPL35-203ENST00000409180 ATP6V1AP38606 617 aa9.74□□□□□ -0.85
MRPL35-203ENST00000409180 RRS1Q15050 365 aaKnown RBP9.74□□□□□ -0.85
MRPL35-203ENST00000409180 NLGN1Q8N2Q7 840 aa9.74□□□□□ -0.85
MRPL35-203ENST00000409180 COG3Q96JB2 828 aa9.74□□□□□ -0.85
MRPL35-203ENST00000409180 DCAF5Q96JK2 942 aa9.74□□□□□ -0.85
MRPL35-203ENST00000409180 TERF2IPQ9NYB0 399 aa9.74□□□□□ -0.85
MRPL35-203ENST00000409180 PIM2Q9P1W9 311 aa9.74□□□□□ -0.85
MRPL35-203ENST00000409180 LTN1O94822 1766 aa9.73□□□□□ -0.85
MRPL35-203ENST00000409180 FOXN1O15353 648 aa9.73□□□□□ -0.85
MRPL35-203ENST00000409180 FAM161AQ3B820 660 aa9.73□□□□□ -0.85
MRPL35-203ENST00000409180 DALRD3Q5D0E6 543 aaKnown RBP9.73□□□□□ -0.85
MRPL35-203ENST00000409180 TRAPPC3LQ5T215 181 aa9.73□□□□□ -0.85
MRPL35-203ENST00000409180 MKRN1Q9UHC7 482 aaKnown RBP9.73□□□□□ -0.85
MRPL35-203ENST00000409180 ASAP1Q9ULH1 1129 aa9.73□□□□□ -0.85
MRPL35-203ENST00000409180 PARP3Q9Y6F1 533 aa9.73□□□□□ -0.85
MRPL35-203ENST00000409180 MON2Q7Z3U7 1717 aa9.73□□□□□ -0.85
MRPL35-203ENST00000409180 VEGFAP15692 232 aaPredicted RBP9.72□□□□□ -0.85
MRPL35-203ENST00000409180 ARHGEF1Q92888 912 aaKnown RBP9.72□□□□□ -0.85
MRPL35-203ENST00000409180 RTCBQ9Y3I0 505 aaKnown RBP9.72□□□□□ -0.85
MRPL35-203ENST00000409180 GYS1P13807 737 aa9.71□□□□□ -0.86
MRPL35-203ENST00000409180 CHRNA5P30532 468 aa9.71□□□□□ -0.86
MRPL35-203ENST00000409180 RASSF7Q02833 373 aa9.71□□□□□ -0.86
MRPL35-203ENST00000409180 TMOD3Q9NYL9 352 aa9.71□□□□□ -0.86
MRPL35-203ENST00000409180 PCDH10Q9P2E7 1040 aa9.71□□□□□ -0.86
MRPL35-203ENST00000409180 GLTPD2A6NH11 291 aa9.7□□□□□ -0.86
MRPL35-203ENST00000409180 PRKAR2AP13861 404 aaKnown RBP9.7□□□□□ -0.86
MRPL35-203ENST00000409180 HSP90AB2PQ58FF8 381 aa9.7□□□□□ -0.86
MRPL35-203ENST00000409180 PRDM10Q9NQV6 1147 aa9.7□□□□□ -0.86
MRPL35-203ENST00000409180 ATG3Q9NT62 314 aa9.7□□□□□ -0.86
MRPL35-203ENST00000409180 RTL1A6NKG5 1358 aa9.7□□□□□ -0.86
MRPL35-203ENST00000409180 KIAA1551Q9HCM1 1747 aa9.7□□□□□ -0.86
MRPL35-203ENST00000409180 RFC4P35249 363 aa9.69□□□□□ -0.86
MRPL35-203ENST00000409180 NKX1-1Q15270 411 aaPredicted RBP9.69□□□□□ -0.86
MRPL35-203ENST00000409180 SMG6Q86US8 1419 aaKnown RBP9.69□□□□□ -0.86
MRPL35-203ENST00000409180 UBR3Q6ZT12 1888 aa9.68□□□□□ -0.86
MRPL35-203ENST00000409180 N4BP2Q86UW6 1770 aaPredicted RBP9.68□□□□□ -0.86
MRPL35-203ENST00000409180 PRR29P0C7W0 189 aa9.68□□□□□ -0.86
MRPL35-203ENST00000409180 DDR1Q08345 913 aa9.68□□□□□ -0.86
MRPL35-203ENST00000409180 SLC4A9Q96Q91 983 aa9.68□□□□□ -0.86
MRPL35-203ENST00000409180 GGNBP2Q9H3C7 697 aa9.68□□□□□ -0.86
MRPL35-203ENST00000409180 ZC3H4Q9UPT8 1303 aaKnown RBP9.67□□□□□ -0.86
MRPL35-203ENST00000409180 POTECB2RU33 542 aa9.67□□□□□ -0.86
MRPL35-203ENST00000409180 LMNB1P20700 586 aa9.67□□□□□ -0.86
MRPL35-203ENST00000409180 CTCFP49711 727 aaPredicted RBP9.67□□□□□ -0.86
MRPL35-203ENST00000409180 AIDAQ96BJ3 306 aa9.67□□□□□ -0.86
MRPL35-203ENST00000409180 ABHD8Q96I13 439 aa9.67□□□□□ -0.86
MRPL35-203ENST00000409180 CREBZFQ9NS37 354 aa9.67□□□□□ -0.86
MRPL35-203ENST00000409180 SRP68Q9UHB9 627 aaKnown RBP9.67□□□□□ -0.86
MRPL35-203ENST00000409180 TAF1LQ8IZX4 1826 aa9.67□□□□□ -0.86
MRPL35-203ENST00000409180 INSRP06213 1382 aa9.66□□□□□ -0.86
MRPL35-203ENST00000409180 RPS6KA4O75676 772 aa9.66□□□□□ -0.86
MRPL35-203ENST00000409180 LBX1P52954 281 aa9.66□□□□□ -0.86
MRPL35-203ENST00000409180 FKBP8Q14318 412 aa9.66□□□□□ -0.86
MRPL35-203ENST00000409180 SPG7Q9UQ90 795 aa9.66□□□□□ -0.86
MRPL35-203ENST00000409180 KDRP35968 1356 aa9.65□□□□□ -0.86
MRPL35-203ENST00000409180 POTEIP0CG38 1075 aa9.65□□□□□ -0.86
MRPL35-203ENST00000409180 POTEJP0CG39 1038 aa9.65□□□□□ -0.86
MRPL35-203ENST00000409180 RC3H1Q5TC82 1133 aaKnown RBP9.65□□□□□ -0.86
MRPL35-203ENST00000409180 CHADLQ6NUI6 762 aa9.65□□□□□ -0.86
MRPL35-203ENST00000409180 SIN3AQ96ST3 1273 aa9.65□□□□□ -0.86
MRPL35-203ENST00000409180 CARD11Q9BXL7 1154 aa9.65□□□□□ -0.86
MRPL35-203ENST00000409180 C4AP0C0L4 1744 aa9.65□□□□□ -0.87
MRPL35-203ENST00000409180 KDM6AO15550 1401 aaPredicted RBP9.65□□□□□ -0.87
MRPL35-203ENST00000409180 CNTNAP1P78357 1384 aa9.64□□□□□ -0.87
MRPL35-203ENST00000409180 CNTNAP4Q9C0A0 1308 aa9.64□□□□□ -0.87
MRPL35-203ENST00000409180 KIF13BQ9NQT8 1826 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms