RNA–Protein interactions for RNA: ENST00000406090.1

AC009494.1-201, humanhuman

BASIC

Gene AC009494.1, Length 455 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009494.1-201ENST00000406090 TRIM35Q9UPQ4 493 aa13.2□□□□□ -0.3
AC009494.1-201ENST00000406090 BTAF1O14981 1849 aa13.2□□□□□ -0.3
AC009494.1-201ENST00000406090 KAT6BQ8WYB5 2073 aa13.19□□□□□ -0.3
AC009494.1-201ENST00000406090 PIGBQ92521 554 aa13.19□□□□□ -0.3
AC009494.1-201ENST00000406090 THUMPD2Q9BTF0 503 aaKnown RBP13.19□□□□□ -0.3
AC009494.1-201ENST00000406090 SALL2Q9Y467 1007 aaPredicted RBP13.19□□□□□ -0.3
AC009494.1-201ENST00000406090 SIPA1L3O60292 1781 aaPredicted RBP13.18□□□□□ -0.3
AC009494.1-201ENST00000406090 APBA3O96018 575 aa13.18□□□□□ -0.3
AC009494.1-201ENST00000406090 TAF7Q15545 349 aaPredicted RBP13.18□□□□□ -0.3
AC009494.1-201ENST00000406090 PTF1AQ7RTS3 328 aa13.18□□□□□ -0.3
AC009494.1-201ENST00000406090 HNRNPUQ00839 825 aaKnown RBP eCLIP13.17□□□□□ -0.3
AC009494.1-201ENST00000406090 DEFB132Q7Z7B7 95 aa13.17□□□□□ -0.3
AC009494.1-201ENST00000406090 WWC1Q8IX03 1113 aa13.17□□□□□ -0.3
AC009494.1-201ENST00000406090 SMARCC1Q92922 1105 aaPredicted RBP13.17□□□□□ -0.3
AC009494.1-201ENST00000406090 PAPPAQ13219 1627 aa13.17□□□□□ -0.3
AC009494.1-201ENST00000406090 BTBD11A6QL63 1104 aa13.16□□□□□ -0.3
AC009494.1-201ENST00000406090 BAG6P46379 1132 aa13.16□□□□□ -0.3
AC009494.1-201ENST00000406090 PALLDQ8WX93 1383 aa13.16□□□□□ -0.3
AC009494.1-201ENST00000406090 RGPD3A6NKT7 1758 aaPredicted RBP13.15□□□□□ -0.3
AC009494.1-201ENST00000406090 RGPD4Q7Z3J3 1758 aa13.15□□□□□ -0.3
AC009494.1-201ENST00000406090 TTC5Q8N0Z6 440 aa13.15□□□□□ -0.3
AC009494.1-201ENST00000406090 ASAP1Q9ULH1 1129 aa13.15□□□□□ -0.3
AC009494.1-201ENST00000406090 PLSCR1O15162 318 aa13.14□□□□□ -0.31
AC009494.1-201ENST00000406090 WDR63Q8IWG1 891 aa13.14□□□□□ -0.31
AC009494.1-201ENST00000406090 ATG3Q9NT62 314 aa13.14□□□□□ -0.31
AC009494.1-201ENST00000406090 IFT57Q9NWB7 429 aa13.14□□□□□ -0.31
AC009494.1-201ENST00000406090 BABAM1Q9NWV8 329 aa13.14□□□□□ -0.31
AC009494.1-201ENST00000406090 TSPYL4Q9UJ04 414 aa13.14□□□□□ -0.31
AC009494.1-201ENST00000406090 LAS1LQ9Y4W2 734 aaKnown RBP13.14□□□□□ -0.31
AC009494.1-201ENST00000406090 IL16Q14005 1332 aa13.13□□□□□ -0.31
AC009494.1-201ENST00000406090 GNAI1P63096 354 aa13.13□□□□□ -0.31
AC009494.1-201ENST00000406090 SLC39A6Q13433 755 aa13.13□□□□□ -0.31
AC009494.1-201ENST00000406090 ZNF790Q6PG37 636 aa13.13□□□□□ -0.31
AC009494.1-201ENST00000406090 CFAP44Q96MT7 982 aa13.13□□□□□ -0.31
AC009494.1-201ENST00000406090 ZNF521Q96K83 1311 aa13.13□□□□□ -0.31
AC009494.1-201ENST00000406090 KDM3BQ7LBC6 1761 aa13.12□□□□□ -0.31
AC009494.1-201ENST00000406090 UBR2Q8IWV8 1755 aa13.12□□□□□ -0.31
AC009494.1-201ENST00000406090 PTCD1O75127 700 aaKnown RBP13.12□□□□□ -0.31
AC009494.1-201ENST00000406090 EN1Q05925 392 aaPredicted RBP13.12□□□□□ -0.31
AC009494.1-201ENST00000406090 RBM42Q9BTD8 480 aaKnown RBP13.12□□□□□ -0.31
AC009494.1-201ENST00000406090 MIS18AQ9NYP9 233 aa13.12□□□□□ -0.31
AC009494.1-201ENST00000406090 LY75O60449 1722 aa13.12□□□□□ -0.31
AC009494.1-201ENST00000406090 CHL1O00533 1208 aa13.11□□□□□ -0.31
AC009494.1-201ENST00000406090 FMNL2Q96PY5 1086 aa13.11□□□□□ -0.31
AC009494.1-201ENST00000406090 KCPQ6ZWJ8 1503 aa13.11□□□□□ -0.31
AC009494.1-201ENST00000406090 LOC102724428A0A0B4J2F2 783 aa13.1□□□□□ -0.31
AC009494.1-201ENST00000406090 ZNF853P0CG23 659 aa13.1□□□□□ -0.31
AC009494.1-201ENST00000406090 SIK1P57059 783 aa13.1□□□□□ -0.31
AC009494.1-201ENST00000406090 GOLGA2Q08379 1002 aa13.1□□□□□ -0.31
AC009494.1-201ENST00000406090 EZH2Q15910 746 aaKnown RBP13.1□□□□□ -0.31
AC009494.1-201ENST00000406090 TXNRD1Q16881 649 aa13.1□□□□□ -0.31
AC009494.1-201ENST00000406090 SLC27A3Q5K4L6 730 aa13.1□□□□□ -0.31
AC009494.1-201ENST00000406090 MYH16Q9H6N6 1097 aa13.1□□□□□ -0.31
AC009494.1-201ENST00000406090 CCNL1Q9UK58 526 aaPredicted RBP13.1□□□□□ -0.31
AC009494.1-201ENST00000406090 ZBED9Q6R2W3 1325 aa13.1□□□□□ -0.31
AC009494.1-201ENST00000406090 HEG1Q9ULI3 1381 aa13.09□□□□□ -0.31
AC009494.1-201ENST00000406090 ZNF831Q5JPB2 1677 aa13.09□□□□□ -0.31
AC009494.1-201ENST00000406090 KCNQ3O43525 872 aa13.09□□□□□ -0.31
AC009494.1-201ENST00000406090 HMGB2P26583 209 aaKnown RBP13.09□□□□□ -0.31
AC009494.1-201ENST00000406090 ZNF496Q96IT1 587 aaPredicted RBP13.09□□□□□ -0.31
AC009494.1-201ENST00000406090 CAMKK2Q96RR4 588 aa13.09□□□□□ -0.31
AC009494.1-201ENST00000406090 MBIPQ9NS73 344 aa13.09□□□□□ -0.31
AC009494.1-201ENST00000406090 RREB1Q92766 1687 aa13.08□□□□□ -0.31
AC009494.1-201ENST00000406090 E9PSI1 815 aa13.08□□□□□ -0.32
AC009494.1-201ENST00000406090 ATP6V1AP38606 617 aa13.08□□□□□ -0.32
AC009494.1-201ENST00000406090 EIF4A1P60842 406 aaKnown RBP13.08□□□□□ -0.32
AC009494.1-201ENST00000406090 VSIG10Q8N0Z9 540 aa13.08□□□□□ -0.32
AC009494.1-201ENST00000406090 CICQ96RK0 1608 aaPredicted RBP13.08□□□□□ -0.32
AC009494.1-201ENST00000406090 SRCAPQ6ZRS2 3230 aa13.07□□□□□ -0.32
AC009494.1-201ENST00000406090 TSR2Q969E8 191 aaKnown RBP13.07□□□□□ -0.32
AC009494.1-201ENST00000406090 YTHDC1Q96MU7 727 aaKnown RBP13.07□□□□□ -0.32
AC009494.1-201ENST00000406090 FANCIQ9NVI1 1328 aa13.07□□□□□ -0.32
AC009494.1-201ENST00000406090 C5P01031 1676 aa13.06□□□□□ -0.32
AC009494.1-201ENST00000406090 TJP1Q07157 1748 aa13.06□□□□□ -0.32
AC009494.1-201ENST00000406090 SNRPA1P09661 255 aaKnown RBP13.06□□□□□ -0.32
AC009494.1-201ENST00000406090 PROM2Q8N271 834 aa13.06□□□□□ -0.32
AC009494.1-201ENST00000406090 SLC4A9Q96Q91 983 aa13.06□□□□□ -0.32
AC009494.1-201ENST00000406090 TEX13AQ9BXU3 409 aaPredicted RBP13.06□□□□□ -0.32
AC009494.1-201ENST00000406090 LRRC4BQ9NT99 713 aa13.06□□□□□ -0.32
AC009494.1-201ENST00000406090 NUP188Q5SRE5 1749 aa13.05□□□□□ -0.32
AC009494.1-201ENST00000406090 PSDA5PKW4 1024 aaPredicted RBP13.05□□□□□ -0.32
AC009494.1-201ENST00000406090 KCNQ4P56696 695 aa13.05□□□□□ -0.32
AC009494.1-201ENST00000406090 SLFN5Q08AF3 891 aa13.05□□□□□ -0.32
AC009494.1-201ENST00000406090 ITPK1Q13572 414 aa13.05□□□□□ -0.32
AC009494.1-201ENST00000406090 SPINK5Q9NQ38 1064 aaPredicted RBP13.05□□□□□ -0.32
AC009494.1-201ENST00000406090 COL5A3P25940 1745 aaPredicted RBP13.05□□□□□ -0.32
AC009494.1-201ENST00000406090 LAMB4A4D0S4 1761 aa13.04□□□□□ -0.32
AC009494.1-201ENST00000406090 GIGYF1O75420 1035 aaPredicted RBP13.04□□□□□ -0.32
AC009494.1-201ENST00000406090 STARD3NLO95772 234 aa13.04□□□□□ -0.32
AC009494.1-201ENST00000406090 DNAJC10Q8IXB1 793 aa13.04□□□□□ -0.32
AC009494.1-201ENST00000406090 TAF1LQ8IZX4 1826 aa13.04□□□□□ -0.32
AC009494.1-201ENST00000406090 C4BP0C0L5 1744 aa13.03□□□□□ -0.32
AC009494.1-201ENST00000406090 HOXB7P09629 217 aa13.03□□□□□ -0.32
AC009494.1-201ENST00000406090 KRT24Q2M2I5 525 aa13.03□□□□□ -0.32
AC009494.1-201ENST00000406090 LINC00116Q8NCU8 138 aa13.03□□□□□ -0.32
AC009494.1-201ENST00000406090 CDCA7LQ96GN5 454 aa13.03□□□□□ -0.32
AC009494.1-201ENST00000406090 SOS1Q07889 1333 aaPredicted RBP13.03□□□□□ -0.32
AC009494.1-201ENST00000406090 CYP19A1P11511 503 aaPredicted RBP13.02□□□□□ -0.33
AC009494.1-201ENST00000406090 DUSP27Q5VZP5 1158 aa13.02□□□□□ -0.33
AC009494.1-201ENST00000406090 AK7Q96M32 723 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms