RNA–Protein interactions for RNA: ENST00000406090.1

AC009494.1-201, humanhuman

BASIC

Gene AC009494.1, Length 455 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009494.1-201ENST00000406090 NISCHQ9Y2I1 1504 aa23.94■■□□□ 1.42
AC009494.1-201ENST00000406090 CCDC180Q9P1Z9 1646 aa21.2■□□□□ 0.98
AC009494.1-201ENST00000406090 ABCC9O60706 1549 aa20.46■□□□□ 0.87
AC009494.1-201ENST00000406090 ZCCHC6Q5VYS8 1495 aaKnown RBP20.02■□□□□ 0.8
AC009494.1-201ENST00000406090 DCAF8L2P0C7V8 631 aa19.88■□□□□ 0.77
AC009494.1-201ENST00000406090 NACADO15069 1562 aa19.86■□□□□ 0.77
AC009494.1-201ENST00000406090 DCAF1Q9Y4B6 1507 aa19.84■□□□□ 0.77
AC009494.1-201ENST00000406090 RB1CC1Q8TDY2 1594 aa19.83■□□□□ 0.76
AC009494.1-201ENST00000406090 MYO15BQ96JP2 1530 aa19.82■□□□□ 0.76
AC009494.1-201ENST00000406090 SCRIBQ14160 1630 aa19.36■□□□□ 0.69
AC009494.1-201ENST00000406090 UNC13AQ9UPW8 1703 aa19.34■□□□□ 0.69
AC009494.1-201ENST00000406090 BICRAQ9NZM4 1560 aa19.18■□□□□ 0.66
AC009494.1-201ENST00000406090 PABPN1Q86U42 306 aaKnown RBP eCLIP19.14■□□□□ 0.65
AC009494.1-201ENST00000406090 DNAJC5BQ9UF47 199 aa19.11■□□□□ 0.65
AC009494.1-201ENST00000406090 SHROOM4Q9ULL8 1493 aa19.07■□□□□ 0.64
AC009494.1-201ENST00000406090 EIF4G1Q04637 1599 aaKnown RBP18.67■□□□□ 0.58
AC009494.1-201ENST00000406090 CECR2Q9BXF3 1484 aa18.6■□□□□ 0.57
AC009494.1-201ENST00000406090 BAZ1AQ9NRL2 1556 aaPredicted RBP18.57■□□□□ 0.56
AC009494.1-201ENST00000406090 SMARCA4P51532 1647 aa18.54■□□□□ 0.56
AC009494.1-201ENST00000406090 CC2D2AQ9P2K1 1620 aa18.51■□□□□ 0.55
AC009494.1-201ENST00000406090 MROH2BQ7Z745 1585 aa18.45■□□□□ 0.54
AC009494.1-201ENST00000406090 SMARCA2P51531 1590 aa18.38■□□□□ 0.53
AC009494.1-201ENST00000406090 PEG3Q9GZU2 1588 aa18.35■□□□□ 0.53
AC009494.1-201ENST00000406090 ATAD2BQ9ULI0 1458 aa18.35■□□□□ 0.53
AC009494.1-201ENST00000406090 RSF1Q96T23 1441 aaPredicted RBP18.34■□□□□ 0.53
AC009494.1-201ENST00000406090 NCAPD3P42695 1498 aa18.3■□□□□ 0.52
AC009494.1-201ENST00000406090 WIZO95785 1651 aa18.27■□□□□ 0.52
AC009494.1-201ENST00000406090 HMGXB3Q12766 1538 aa18.26■□□□□ 0.51
AC009494.1-201ENST00000406090 BAZ1BQ9UIG0 1483 aaKnown RBP18.25■□□□□ 0.51
AC009494.1-201ENST00000406090 TOP2AP11388 1531 aaKnown RBP18.12■□□□□ 0.49
AC009494.1-201ENST00000406090 SUPT5HO00267 1087 aaKnown RBP18.08■□□□□ 0.48
AC009494.1-201ENST00000406090 CCDC88BA6NC98 1476 aa17.88■□□□□ 0.45
AC009494.1-201ENST00000406090 LAMC3Q9Y6N6 1575 aa17.81■□□□□ 0.44
AC009494.1-201ENST00000406090 CADPSQ9ULU8 1353 aa17.78■□□□□ 0.44
AC009494.1-201ENST00000406090 NESP48681 1621 aa17.76■□□□□ 0.43
AC009494.1-201ENST00000406090 CFTRP13569 1480 aa17.74■□□□□ 0.43
AC009494.1-201ENST00000406090 PDS5BQ9NTI5 1447 aa17.67■□□□□ 0.42
AC009494.1-201ENST00000406090 PRDM2Q13029 1718 aa17.64■□□□□ 0.41
AC009494.1-201ENST00000406090 ERCC6Q03468 1493 aa17.64■□□□□ 0.41
AC009494.1-201ENST00000406090 FANCD2Q9BXW9 1451 aa17.59■□□□□ 0.41
AC009494.1-201ENST00000406090 KIF21AQ7Z4S6 1674 aa17.58■□□□□ 0.41
AC009494.1-201ENST00000406090 CEP164Q9UPV0 1460 aa17.56■□□□□ 0.4
AC009494.1-201ENST00000406090 DNAJC5Q9H3Z4 198 aa17.53■□□□□ 0.4
AC009494.1-201ENST00000406090 MRC2Q9UBG0 1479 aa17.48■□□□□ 0.39
AC009494.1-201ENST00000406090 THOC2Q8NI27 1593 aaKnown RBP17.46■□□□□ 0.39
AC009494.1-201ENST00000406090 CUX2O14529 1486 aa17.41■□□□□ 0.38
AC009494.1-201ENST00000406090 WDR62O43379 1518 aa17.4■□□□□ 0.38
AC009494.1-201ENST00000406090 URB2Q14146 1524 aaKnown RBP17.39■□□□□ 0.37
AC009494.1-201ENST00000406090 ABCC8Q09428 1581 aa17.37■□□□□ 0.37
AC009494.1-201ENST00000406090 DNMBPQ6XZF7 1577 aa17.36■□□□□ 0.37
AC009494.1-201ENST00000406090 TOPBP1Q92547 1522 aa17.33■□□□□ 0.37
AC009494.1-201ENST00000406090 WRNQ14191 1432 aaPredicted RBP eCLIP17.31■□□□□ 0.36
AC009494.1-201ENST00000406090 CUX1P39880 1505 aa17.3■□□□□ 0.36
AC009494.1-201ENST00000406090 TOP2BQ02880 1626 aa17.24■□□□□ 0.35
AC009494.1-201ENST00000406090 BIVM-ERCC5R4GMW8 1640 aa17.24■□□□□ 0.35
AC009494.1-201ENST00000406090 SYNJ1O43426 1573 aa17.23■□□□□ 0.35
AC009494.1-201ENST00000406090 POLA1P09884 1462 aaPredicted RBP17.21■□□□□ 0.35
AC009494.1-201ENST00000406090 FGD5Q6ZNL6 1462 aa17.21■□□□□ 0.35
AC009494.1-201ENST00000406090 IFT140Q96RY7 1462 aa17.18■□□□□ 0.34
AC009494.1-201ENST00000406090 SOGA1O94964 1423 aa17.14■□□□□ 0.33
AC009494.1-201ENST00000406090 TARBP1Q13395 1621 aaKnown RBP17.13■□□□□ 0.33
AC009494.1-201ENST00000406090 RAD54L2Q9Y4B4 1467 aa17.12■□□□□ 0.33
AC009494.1-201ENST00000406090 TRIM41Q8WV44 630 aa17.07■□□□□ 0.32
AC009494.1-201ENST00000406090 WDR97A6NE52 1622 aa17.06■□□□□ 0.32
AC009494.1-201ENST00000406090 ABCA10Q8WWZ4 1543 aa17.06■□□□□ 0.32
AC009494.1-201ENST00000406090 ZNF608Q9ULD9 1512 aaPredicted RBP17.04■□□□□ 0.32
AC009494.1-201ENST00000406090 EIF4G3O43432 1585 aaKnown RBP17.02■□□□□ 0.32
AC009494.1-201ENST00000406090 CHIC1Q5VXU3 224 aa17.01■□□□□ 0.31
AC009494.1-201ENST00000406090 TDRD9Q8NDG6 1382 aaKnown RBP17■□□□□ 0.31
AC009494.1-201ENST00000406090 AQRO60306 1485 aaKnown RBP eCLIP16.98■□□□□ 0.31
AC009494.1-201ENST00000406090 ABCA5Q8WWZ7 1642 aa16.97■□□□□ 0.31
AC009494.1-201ENST00000406090 GAPVD1Q14C86 1478 aa16.95■□□□□ 0.3
AC009494.1-201ENST00000406090 KIF27Q86VH2 1401 aa16.94■□□□□ 0.3
AC009494.1-201ENST00000406090 GRIN2BQ13224 1484 aa16.93■□□□□ 0.3
AC009494.1-201ENST00000406090 PBRM1Q86U86 1689 aa16.91■□□□□ 0.3
AC009494.1-201ENST00000406090 ERICH3Q5RHP9 1530 aa16.86■□□□□ 0.29
AC009494.1-201ENST00000406090 SNAPC4Q5SXM2 1469 aa16.86■□□□□ 0.29
AC009494.1-201ENST00000406090 MAGI1Q96QZ7 1491 aaPredicted RBP16.86■□□□□ 0.29
AC009494.1-201ENST00000406090 RUSC2Q8N2Y8 1516 aa16.81■□□□□ 0.28
AC009494.1-201ENST00000406090 EEA1Q15075 1411 aa16.8■□□□□ 0.28
AC009494.1-201ENST00000406090 ADAMTS12P58397 1594 aa16.8■□□□□ 0.28
AC009494.1-201ENST00000406090 CUL7Q14999 1698 aa16.78■□□□□ 0.28
AC009494.1-201ENST00000406090 IGF1RP08069 1367 aa16.78■□□□□ 0.28
AC009494.1-201ENST00000406090 SYNJ2O15056 1496 aa16.78■□□□□ 0.28
AC009494.1-201ENST00000406090 FHAD1B1AJZ9 1412 aa16.78■□□□□ 0.28
AC009494.1-201ENST00000406090 OSCARQ8IYS5 282 aa16.77■□□□□ 0.28
AC009494.1-201ENST00000406090 CHD1O14646 1710 aa16.74■□□□□ 0.27
AC009494.1-201ENST00000406090 FBLN2P98095 1184 aa16.74■□□□□ 0.27
AC009494.1-201ENST00000406090 CHMP7Q8WUX9 453 aaPredicted RBP16.74■□□□□ 0.27
AC009494.1-201ENST00000406090 CARMIL1Q5VZK9 1371 aa16.72■□□□□ 0.27
AC009494.1-201ENST00000406090 FAM9AQ8IZU1 332 aaPredicted RBP16.71■□□□□ 0.27
AC009494.1-201ENST00000406090 GRIN2AQ12879 1464 aa16.71■□□□□ 0.27
AC009494.1-201ENST00000406090 CSRNP3Q8WYN3 585 aa16.7■□□□□ 0.26
AC009494.1-201ENST00000406090 PRXQ9BXM0 1461 aa16.66■□□□□ 0.26
AC009494.1-201ENST00000406090 RAPGEF2Q9Y4G8 1499 aa16.66■□□□□ 0.26
AC009494.1-201ENST00000406090 NUP160Q12769 1436 aa16.61■□□□□ 0.25
AC009494.1-201ENST00000406090 CEP170Q5SW79 1584 aa16.6■□□□□ 0.25
AC009494.1-201ENST00000406090 KIF21BO75037 1637 aa16.59■□□□□ 0.25
AC009494.1-201ENST00000406090 CLASP1Q7Z460 1538 aa16.57■□□□□ 0.24
AC009494.1-201ENST00000406090 GOLGA3Q08378 1498 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 115.9 ms