RNA–Protein interactions for RNA: ENST00000400214.2

HMGB3P7-201, Transcript of high mobility group box 3 pseudogene 7, humanhuman

BASIC

Gene HMGB3P7, Length 611 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P7-201ENST00000400214 RAB3GAP2Q9H2M9 1393 aa7.35□□□□□ -1.23
HMGB3P7-201ENST00000400214 RAB11FIP3O75154 756 aa7.35□□□□□ -1.23
HMGB3P7-201ENST00000400214 NLRP7Q8WX94 980 aa7.35□□□□□ -1.23
HMGB3P7-201ENST00000400214 DDX12PQ92771 950 aa7.35□□□□□ -1.23
HMGB3P7-201ENST00000400214 TRIM52Q96A61 297 aa7.35□□□□□ -1.23
HMGB3P7-201ENST00000400214 PPLO60437 1756 aa7.35□□□□□ -1.23
HMGB3P7-201ENST00000400214 XIRP1Q702N8 1843 aaKnown RBP7.34□□□□□ -1.23
HMGB3P7-201ENST00000400214 ANKRD33BA6NCL7 494 aa7.34□□□□□ -1.23
HMGB3P7-201ENST00000400214 PTPN5P54829 565 aa7.34□□□□□ -1.23
HMGB3P7-201ENST00000400214 MARSP56192 900 aaKnown RBP7.34□□□□□ -1.23
HMGB3P7-201ENST00000400214 TAGLNQ01995 201 aaKnown RBP7.34□□□□□ -1.23
HMGB3P7-201ENST00000400214 VAC14Q08AM6 782 aa7.34□□□□□ -1.23
HMGB3P7-201ENST00000400214 ZNF326Q5BKZ1 582 aaKnown RBP7.34□□□□□ -1.23
HMGB3P7-201ENST00000400214 MPHOSPH9Q99550 1183 aa7.34□□□□□ -1.23
HMGB3P7-201ENST00000400214 SUGT1Q9Y2Z0 365 aa7.34□□□□□ -1.23
HMGB3P7-201ENST00000400214 EID1Q9Y6B2 187 aa7.34□□□□□ -1.23
HMGB3P7-201ENST00000400214 CPS1P31327 1500 aa7.33□□□□□ -1.24
HMGB3P7-201ENST00000400214 IFT172Q9UG01 1749 aa7.33□□□□□ -1.24
HMGB3P7-201ENST00000400214 SOWAHDA6NJG2 315 aa7.33□□□□□ -1.24
HMGB3P7-201ENST00000400214 AP1G2O75843 785 aa7.33□□□□□ -1.24
HMGB3P7-201ENST00000400214 HDGFP51858 240 aaKnown RBP7.33□□□□□ -1.24
HMGB3P7-201ENST00000400214 FOSBP53539 338 aa7.33□□□□□ -1.24
HMGB3P7-201ENST00000400214 RBM46Q8TBY0 533 aaKnown RBP7.33□□□□□ -1.24
HMGB3P7-201ENST00000400214 CERKQ8TCT0 537 aa7.33□□□□□ -1.24
HMGB3P7-201ENST00000400214 ALG2Q9H553 416 aa7.33□□□□□ -1.24
HMGB3P7-201ENST00000400214 RIMS2Q9UQ26 1411 aa7.33□□□□□ -1.24
HMGB3P7-201ENST00000400214 DIP2AQ14689 1571 aa7.33□□□□□ -1.24
HMGB3P7-201ENST00000400214 PLEKHG1Q9ULL1 1385 aa7.33□□□□□ -1.24
HMGB3P7-201ENST00000400214 NEXMIFQ5QGS0 1516 aa7.32□□□□□ -1.24
HMGB3P7-201ENST00000400214 ZNF335Q9H4Z2 1342 aaPredicted RBP7.32□□□□□ -1.24
HMGB3P7-201ENST00000400214 NRXN3Q9Y4C0 1643 aa7.32□□□□□ -1.24
HMGB3P7-201ENST00000400214 WASHC4Q2M389 1173 aa7.32□□□□□ -1.24
HMGB3P7-201ENST00000400214 PPP4R3BQ5MIZ7 849 aa7.32□□□□□ -1.24
HMGB3P7-201ENST00000400214 TMEM164Q5U3C3 297 aa7.32□□□□□ -1.24
HMGB3P7-201ENST00000400214 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.32□□□□□ -1.24
HMGB3P7-201ENST00000400214 PTCD2Q8WV60 388 aaKnown RBP7.32□□□□□ -1.24
HMGB3P7-201ENST00000400214 STAC3Q96MF2 364 aa7.32□□□□□ -1.24
HMGB3P7-201ENST00000400214 MAFBQ9Y5Q3 323 aaPredicted RBP7.32□□□□□ -1.24
HMGB3P7-201ENST00000400214 NWD1Q149M9 1564 aa7.32□□□□□ -1.24
HMGB3P7-201ENST00000400214 SETD1AO15047 1707 aaKnown RBP7.31□□□□□ -1.24
HMGB3P7-201ENST00000400214 MAP3K9P80192 1104 aa7.31□□□□□ -1.24
HMGB3P7-201ENST00000400214 THSD4Q6ZMP0 1018 aa7.31□□□□□ -1.24
HMGB3P7-201ENST00000400214 RIC3Q7Z5B4 369 aa7.31□□□□□ -1.24
HMGB3P7-201ENST00000400214 STK32AQ8WU08 396 aa7.31□□□□□ -1.24
HMGB3P7-201ENST00000400214 GJD4Q96KN9 370 aaPredicted RBP7.31□□□□□ -1.24
HMGB3P7-201ENST00000400214 CDCA7Q9BWT1 371 aaPredicted RBP7.31□□□□□ -1.24
HMGB3P7-201ENST00000400214 RBM27Q9P2N5 1060 aaKnown RBP7.31□□□□□ -1.24
HMGB3P7-201ENST00000400214 ZMIZ1Q9ULJ6 1067 aa7.31□□□□□ -1.24
HMGB3P7-201ENST00000400214 VPS9D1Q9Y2B5 631 aa7.31□□□□□ -1.24
HMGB3P7-201ENST00000400214 NDUFB9Q9Y6M9 179 aa7.31□□□□□ -1.24
HMGB3P7-201ENST00000400214 SETBP1Q9Y6X0 1596 aa7.31□□□□□ -1.24
HMGB3P7-201ENST00000400214 RPGRIP1LQ68CZ1 1315 aa7.3□□□□□ -1.24
HMGB3P7-201ENST00000400214 CCDC144AA2RUR9 1427 aa7.3□□□□□ -1.24
HMGB3P7-201ENST00000400214 SPATA31E1Q6ZUB1 1445 aa7.3□□□□□ -1.24
HMGB3P7-201ENST00000400214 TPD52L2O43399 206 aaKnown RBP7.3□□□□□ -1.24
HMGB3P7-201ENST00000400214 GPR37L1O60883 481 aa7.3□□□□□ -1.24
HMGB3P7-201ENST00000400214 USP17L8P0C7I0 530 aa7.3□□□□□ -1.24
HMGB3P7-201ENST00000400214 ERCC5P28715 1186 aaPredicted RBP7.3□□□□□ -1.24
HMGB3P7-201ENST00000400214 ARID4AP29374 1257 aaPredicted RBP7.3□□□□□ -1.24
HMGB3P7-201ENST00000400214 TMC2Q8TDI7 906 aa7.3□□□□□ -1.24
HMGB3P7-201ENST00000400214 FBXO41Q8TF61 875 aa7.3□□□□□ -1.24
HMGB3P7-201ENST00000400214 GPATCH3Q96I76 525 aa7.3□□□□□ -1.24
HMGB3P7-201ENST00000400214 DNAJC2Q99543 621 aaKnown RBP7.3□□□□□ -1.24
HMGB3P7-201ENST00000400214 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.3□□□□□ -1.24
HMGB3P7-201ENST00000400214 SBNO2Q9Y2G9 1366 aa7.3□□□□□ -1.24
HMGB3P7-201ENST00000400214 ADAMTS13Q76LX8 1427 aa7.29□□□□□ -1.24
HMGB3P7-201ENST00000400214 SERPINB4P48594 390 aa7.29□□□□□ -1.24
HMGB3P7-201ENST00000400214 CSPP1Q1MSJ5 1256 aa7.29□□□□□ -1.24
HMGB3P7-201ENST00000400214 TSNAXIP1Q2TAA8 658 aa7.29□□□□□ -1.24
HMGB3P7-201ENST00000400214 Q6ZNB5 142 aa7.29□□□□□ -1.24
HMGB3P7-201ENST00000400214 NOP9Q86U38 636 aaKnown RBP7.29□□□□□ -1.24
HMGB3P7-201ENST00000400214 EXOC8Q8IYI6 725 aa7.29□□□□□ -1.24
HMGB3P7-201ENST00000400214 LNPKQ9C0E8 428 aa7.29□□□□□ -1.24
HMGB3P7-201ENST00000400214 MYH16Q9H6N6 1097 aa7.29□□□□□ -1.24
HMGB3P7-201ENST00000400214 TBX22Q9Y458 520 aa7.29□□□□□ -1.24
HMGB3P7-201ENST00000400214 PIK3R4Q99570 1358 aa7.29□□□□□ -1.24
HMGB3P7-201ENST00000400214 ANKRD30BQ9BXX2 1392 aa7.29□□□□□ -1.24
HMGB3P7-201ENST00000400214 LRRC7Q96NW7 1537 aa7.28□□□□□ -1.24
HMGB3P7-201ENST00000400214 KCNA6P17658 529 aa7.28□□□□□ -1.24
HMGB3P7-201ENST00000400214 FOXK1P85037 733 aa7.28□□□□□ -1.24
HMGB3P7-201ENST00000400214 KCNK17Q96T54 332 aa7.28□□□□□ -1.24
HMGB3P7-201ENST00000400214 SLC4A5Q9BY07 1137 aa7.28□□□□□ -1.24
HMGB3P7-201ENST00000400214 CDHR5Q9HBB8 845 aa7.28□□□□□ -1.24
HMGB3P7-201ENST00000400214 NPDC1Q9NQX5 325 aaPredicted RBP7.28□□□□□ -1.24
HMGB3P7-201ENST00000400214 BIN2Q9UBW5 565 aaPredicted RBP7.28□□□□□ -1.24
HMGB3P7-201ENST00000400214 NKTRP30414 1462 aaKnown RBP7.28□□□□□ -1.24
HMGB3P7-201ENST00000400214 XRN1Q8IZH2 1706 aaKnown RBP7.27□□□□□ -1.25
HMGB3P7-201ENST00000400214 BHMG1C9JSJ3 638 aaPredicted RBP7.27□□□□□ -1.25
HMGB3P7-201ENST00000400214 SSFA2P28290 1259 aa7.27□□□□□ -1.25
HMGB3P7-201ENST00000400214 DIXDC1Q155Q3 683 aa7.27□□□□□ -1.25
HMGB3P7-201ENST00000400214 QPCTQ16769 361 aa7.27□□□□□ -1.25
HMGB3P7-201ENST00000400214 FAM161AQ3B820 660 aa7.27□□□□□ -1.25
HMGB3P7-201ENST00000400214 TBC1D9Q6ZT07 1266 aa7.27□□□□□ -1.25
HMGB3P7-201ENST00000400214 FBXO33Q7Z6M2 555 aa7.27□□□□□ -1.25
HMGB3P7-201ENST00000400214 PRR7Q8TB68 274 aa7.27□□□□□ -1.25
HMGB3P7-201ENST00000400214 SLAIN2Q9P270 581 aa7.27□□□□□ -1.25
HMGB3P7-201ENST00000400214 TMA7Q9Y2S6 64 aaKnown RBP7.27□□□□□ -1.25
HMGB3P7-201ENST00000400214 ALKQ9UM73 1620 aa7.27□□□□□ -1.25
HMGB3P7-201ENST00000400214 ELOAQ14241 798 aaKnown RBP7.26□□□□□ -1.25
HMGB3P7-201ENST00000400214 TUSC1Q2TAM9 212 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms