RNA–Protein interactions for RNA: ENST00000400053.8

PTPRM-202, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPRM, Length 5,292 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-202ENST00000400053 DISP1Q96F81 1524 aa10.43□□□□□ -0.74
PTPRM-202ENST00000400053 ADGRL2O95490 1459 aa10.43□□□□□ -0.74
PTPRM-202ENST00000400053 TEX14Q8IWB6 1497 aa10.43□□□□□ -0.74
PTPRM-202ENST00000400053 IKQ13123 557 aaPredicted RBP10.43□□□□□ -0.74
PTPRM-202ENST00000400053 JAKMIP1Q96N16 626 aaKnown RBP10.43□□□□□ -0.74
PTPRM-202ENST00000400053 MTMR7Q9Y216 660 aa10.43□□□□□ -0.74
PTPRM-202ENST00000400053 MAP3K11Q16584 847 aa10.42□□□□□ -0.74
PTPRM-202ENST00000400053 CEP57L1Q8IYX8 460 aa10.42□□□□□ -0.74
PTPRM-202ENST00000400053 PLCD4Q9BRC7 762 aa10.42□□□□□ -0.74
PTPRM-202ENST00000400053 KIF21AQ7Z4S6 1674 aa10.42□□□□□ -0.74
PTPRM-202ENST00000400053 KRT18P05783 430 aaKnown RBP10.42□□□□□ -0.74
PTPRM-202ENST00000400053 FYB1O15117 783 aa10.42□□□□□ -0.74
PTPRM-202ENST00000400053 XRCC6P12956 609 aaKnown RBP eCLIP10.42□□□□□ -0.74
PTPRM-202ENST00000400053 PPFIBP1Q86W92 1011 aa10.42□□□□□ -0.74
PTPRM-202ENST00000400053 THUMPD2Q9BTF0 503 aaKnown RBP10.42□□□□□ -0.74
PTPRM-202ENST00000400053 BLOC1S2Q6QNY1 142 aa10.42□□□□□ -0.74
PTPRM-202ENST00000400053 CWC27Q6UX04 472 aaKnown RBP10.42□□□□□ -0.74
PTPRM-202ENST00000400053 GDPD2Q9HCC8 539 aa10.42□□□□□ -0.74
PTPRM-202ENST00000400053 ABCA5Q8WWZ7 1642 aa10.42□□□□□ -0.74
PTPRM-202ENST00000400053 FAM193AP78312 1265 aa10.42□□□□□ -0.74
PTPRM-202ENST00000400053 PTPN14Q15678 1187 aa10.42□□□□□ -0.74
PTPRM-202ENST00000400053 CCDC102AQ96A19 550 aa10.42□□□□□ -0.74
PTPRM-202ENST00000400053 SPDYE4A6NLX3 237 aa10.41□□□□□ -0.74
PTPRM-202ENST00000400053 PDRG1Q9NUG6 133 aa10.41□□□□□ -0.74
PTPRM-202ENST00000400053 TRIM27P14373 513 aa10.41□□□□□ -0.74
PTPRM-202ENST00000400053 SLC26A8Q96RN1 970 aa10.41□□□□□ -0.74
PTPRM-202ENST00000400053 EXOC6BQ9Y2D4 811 aa10.41□□□□□ -0.74
PTPRM-202ENST00000400053 PDIA4P13667 645 aaKnown RBP10.41□□□□□ -0.74
PTPRM-202ENST00000400053 TMCO3Q6UWJ1 677 aa10.41□□□□□ -0.74
PTPRM-202ENST00000400053 NLRP2Q9NX02 1062 aa10.41□□□□□ -0.74
PTPRM-202ENST00000400053 IL16Q14005 1332 aa10.41□□□□□ -0.74
PTPRM-202ENST00000400053 C16orf45Q96MC5 204 aaPredicted RBP10.41□□□□□ -0.74
PTPRM-202ENST00000400053 SIL1Q9H173 461 aa10.41□□□□□ -0.74
PTPRM-202ENST00000400053 CLCN1P35523 988 aa10.4□□□□□ -0.74
PTPRM-202ENST00000400053 SRCIN1Q9C0H9 1055 aa10.4□□□□□ -0.74
PTPRM-202ENST00000400053 EIF2AK4Q9P2K8 1649 aaKnown RBP10.4□□□□□ -0.74
PTPRM-202ENST00000400053 ANKRD62A6NC57 917 aa10.4□□□□□ -0.74
PTPRM-202ENST00000400053 IGHDP01880 384 aa10.4□□□□□ -0.74
PTPRM-202ENST00000400053 ANKRD1Q15327 319 aa10.4□□□□□ -0.74
PTPRM-202ENST00000400053 PPP4R3BQ5MIZ7 849 aa10.4□□□□□ -0.74
PTPRM-202ENST00000400053 CCDC181Q5TID7 509 aa10.4□□□□□ -0.74
PTPRM-202ENST00000400053 DDX11Q96FC9 970 aa10.4□□□□□ -0.74
PTPRM-202ENST00000400053 DNAI2Q9GZS0 605 aa10.4□□□□□ -0.74
PTPRM-202ENST00000400053 DDX54Q8TDD1 881 aaKnown RBP10.4□□□□□ -0.74
PTPRM-202ENST00000400053 CENPHQ9H3R5 247 aa10.4□□□□□ -0.75
PTPRM-202ENST00000400053 TRAPPC8Q9Y2L5 1435 aa10.4□□□□□ -0.75
PTPRM-202ENST00000400053 ANKRD36BQ8N2N9 1353 aa10.4□□□□□ -0.75
PTPRM-202ENST00000400053 DENND4BO75064 1496 aaPredicted RBP10.39□□□□□ -0.75
PTPRM-202ENST00000400053 SMARCA5O60264 1052 aaPredicted RBP10.39□□□□□ -0.75
PTPRM-202ENST00000400053 ERC1Q8IUD2 1116 aa10.39□□□□□ -0.75
PTPRM-202ENST00000400053 DEF6Q9H4E7 631 aa10.39□□□□□ -0.75
PTPRM-202ENST00000400053 POLR3AO14802 1390 aaPredicted RBP10.39□□□□□ -0.75
PTPRM-202ENST00000400053 POLR3GO15318 223 aaPredicted RBP10.39□□□□□ -0.75
PTPRM-202ENST00000400053 HMGB2P26583 209 aaKnown RBP10.39□□□□□ -0.75
PTPRM-202ENST00000400053 TAF3Q5VWG9 929 aa10.39□□□□□ -0.75
PTPRM-202ENST00000400053 CCDC83Q8IWF9 413 aa10.39□□□□□ -0.75
PTPRM-202ENST00000400053 RBM27Q9P2N5 1060 aaKnown RBP10.39□□□□□ -0.75
PTPRM-202ENST00000400053 WASLO00401 505 aaPredicted RBP10.39□□□□□ -0.75
PTPRM-202ENST00000400053 CBFA2T2O43439 604 aa10.39□□□□□ -0.75
PTPRM-202ENST00000400053 TNNT1P13805 278 aa10.39□□□□□ -0.75
PTPRM-202ENST00000400053 TRIM21P19474 475 aaKnown RBP10.39□□□□□ -0.75
PTPRM-202ENST00000400053 CETN2P41208 172 aa10.39□□□□□ -0.75
PTPRM-202ENST00000400053 ENOX2Q16206 610 aaKnown RBP10.39□□□□□ -0.75
PTPRM-202ENST00000400053 ESCO1Q5FWF5 840 aa10.39□□□□□ -0.75
PTPRM-202ENST00000400053 NME9Q86XW9 330 aa10.39□□□□□ -0.75
PTPRM-202ENST00000400053 PUS7Q96PZ0 661 aaKnown RBP10.39□□□□□ -0.75
PTPRM-202ENST00000400053 TRMT1Q9NXH9 659 aaKnown RBP10.39□□□□□ -0.75
PTPRM-202ENST00000400053 FBXO31Q5XUX0 539 aaPredicted RBP10.39□□□□□ -0.75
PTPRM-202ENST00000400053 GNL3LQ9NVN8 582 aaKnown RBP10.39□□□□□ -0.75
PTPRM-202ENST00000400053 CFAP45Q9UL16 551 aa10.39□□□□□ -0.75
PTPRM-202ENST00000400053 PPP6R1Q9UPN7 881 aa10.39□□□□□ -0.75
PTPRM-202ENST00000400053 EMILIN1Q9Y6C2 1016 aa10.39□□□□□ -0.75
PTPRM-202ENST00000400053 PIK3C2GO75747 1445 aa10.39□□□□□ -0.75
PTPRM-202ENST00000400053 SRGAP3O43295 1099 aa10.38□□□□□ -0.75
PTPRM-202ENST00000400053 BAG4O95429 457 aaKnown RBP10.38□□□□□ -0.75
PTPRM-202ENST00000400053 CFAP100Q494V2 611 aa10.38□□□□□ -0.75
PTPRM-202ENST00000400053 CCDC183Q5T5S1 534 aa10.38□□□□□ -0.75
PTPRM-202ENST00000400053 SAMD1Q6SPF0 538 aaPredicted RBP10.38□□□□□ -0.75
PTPRM-202ENST00000400053 KIF18AQ8NI77 898 aa10.38□□□□□ -0.75
PTPRM-202ENST00000400053 BMP2KQ9NSY1 1161 aaPredicted RBP10.38□□□□□ -0.75
PTPRM-202ENST00000400053 CASTP20810 708 aaKnown RBP10.38□□□□□ -0.75
PTPRM-202ENST00000400053 SFPQP23246 707 aaKnown RBP eCLIP10.38□□□□□ -0.75
PTPRM-202ENST00000400053 TRIM22Q8IYM9 498 aa10.38□□□□□ -0.75
PTPRM-202ENST00000400053 ZSCAN31Q96LW9 406 aaPredicted RBP10.38□□□□□ -0.75
PTPRM-202ENST00000400053 URI1O94763 535 aaPredicted RBP10.38□□□□□ -0.75
PTPRM-202ENST00000400053 ATF3P18847 181 aa10.38□□□□□ -0.75
PTPRM-202ENST00000400053 GBP2P32456 591 aaPredicted RBP10.38□□□□□ -0.75
PTPRM-202ENST00000400053 CKAP2LQ8IYA6 745 aa10.38□□□□□ -0.75
PTPRM-202ENST00000400053 SYTL4Q96C24 671 aaPredicted RBP10.38□□□□□ -0.75
PTPRM-202ENST00000400053 LRRFIP2Q9Y608 721 aaKnown RBP10.38□□□□□ -0.75
PTPRM-202ENST00000400053 TBC1D32Q96NH3 1257 aa10.37□□□□□ -0.75
PTPRM-202ENST00000400053 COL17A1Q9UMD9 1497 aaPredicted RBP10.37□□□□□ -0.75
PTPRM-202ENST00000400053 NUTM1Q86Y26 1132 aa10.37□□□□□ -0.75
PTPRM-202ENST00000400053 ZNF530Q6P9A1 599 aaPredicted RBP10.37□□□□□ -0.75
PTPRM-202ENST00000400053 MAGI3Q5TCQ9 1506 aa10.37□□□□□ -0.75
PTPRM-202ENST00000400053 LARP6Q9BRS8 491 aaKnown RBP10.37□□□□□ -0.75
PTPRM-202ENST00000400053 GTF2F1P35269 517 aaKnown RBP eCLIP10.36□□□□□ -0.75
PTPRM-202ENST00000400053 MEX3CQ5U5Q3 659 aaKnown RBP10.36□□□□□ -0.75
PTPRM-202ENST00000400053 MCM10Q7L590 875 aa10.36□□□□□ -0.75
PTPRM-202ENST00000400053 CCDC91Q7Z6B0 441 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms