RNA–Protein interactions for RNA: ENST00000399306.6

CTNS-203, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3 BASIC

Gene CTNS, Length 803 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-203ENST00000399306 NCBP3Q53F19 620 aaKnown RBP23.32■■□□□ 1.32
CTNS-203ENST00000399306 SLC27A3Q5K4L6 730 aa23.32■■□□□ 1.32
CTNS-203ENST00000399306 EZH2Q15910 746 aaKnown RBP23.31■■□□□ 1.32
CTNS-203ENST00000399306 SIPA1L3O60292 1781 aaPredicted RBP23.31■■□□□ 1.32
CTNS-203ENST00000399306 NFATC2IPQ8NCF5 419 aa23.3■■□□□ 1.32
CTNS-203ENST00000399306 ZNF831Q5JPB2 1677 aa23.29■■□□□ 1.32
CTNS-203ENST00000399306 TEFQ10587 303 aa23.29■■□□□ 1.32
CTNS-203ENST00000399306 TXNRD1Q16881 649 aa23.29■■□□□ 1.32
CTNS-203ENST00000399306 PALLDQ8WX93 1383 aa23.28■■□□□ 1.32
CTNS-203ENST00000399306 CCDC146Q8IYE0 955 aa23.28■■□□□ 1.32
CTNS-203ENST00000399306 PROM2Q8N271 834 aa23.28■■□□□ 1.32
CTNS-203ENST00000399306 NUP188Q5SRE5 1749 aa23.28■■□□□ 1.32
CTNS-203ENST00000399306 PAPPAQ13219 1627 aa23.27■■□□□ 1.32
CTNS-203ENST00000399306 RIPK4P57078 832 aa23.27■■□□□ 1.32
CTNS-203ENST00000399306 ATG3Q9NT62 314 aa23.27■■□□□ 1.32
CTNS-203ENST00000399306 NGEFQ8N5V2 710 aa23.25■■□□□ 1.31
CTNS-203ENST00000399306 ASAP1Q9ULH1 1129 aa23.25■■□□□ 1.31
CTNS-203ENST00000399306 CICQ96RK0 1608 aaPredicted RBP23.24■■□□□ 1.31
CTNS-203ENST00000399306 MCM10Q7L590 875 aa23.23■■□□□ 1.31
CTNS-203ENST00000399306 BABAM1Q9NWV8 329 aa23.23■■□□□ 1.31
CTNS-203ENST00000399306 LOC102724428A0A0B4J2F2 783 aa23.22■■□□□ 1.31
CTNS-203ENST00000399306 APAF1O14727 1248 aa23.22■■□□□ 1.31
CTNS-203ENST00000399306 SIK1P57059 783 aa23.22■■□□□ 1.31
CTNS-203ENST00000399306 TAF7Q15545 349 aaPredicted RBP23.22■■□□□ 1.31
CTNS-203ENST00000399306 MIER1Q8N108 512 aa23.22■■□□□ 1.31
CTNS-203ENST00000399306 CCNL1Q9UK58 526 aaPredicted RBP23.22■■□□□ 1.31
CTNS-203ENST00000399306 UBR2Q8IWV8 1755 aa23.22■■□□□ 1.31
CTNS-203ENST00000399306 CCDC27Q2M243 656 aa23.21■■□□□ 1.31
CTNS-203ENST00000399306 NBPF14Q5TI25 921 aa23.21■■□□□ 1.31
CTNS-203ENST00000399306 TAF1LQ8IZX4 1826 aa23.2■■□□□ 1.3
CTNS-203ENST00000399306 FAM9BQ8IZU0 186 aa23.2■■□□□ 1.3
CTNS-203ENST00000399306 LRRC4BQ9NT99 713 aa23.2■■□□□ 1.3
CTNS-203ENST00000399306 TRIM35Q9UPQ4 493 aa23.2■■□□□ 1.3
CTNS-203ENST00000399306 DCTN1Q14203 1278 aa23.19■■□□□ 1.3
CTNS-203ENST00000399306 ZNF790Q6PG37 636 aa23.19■■□□□ 1.3
CTNS-203ENST00000399306 VSIG10Q8N0Z9 540 aa23.19■■□□□ 1.3
CTNS-203ENST00000399306 BTBD11A6QL63 1104 aa23.18■■□□□ 1.3
CTNS-203ENST00000399306 CALD1Q05682 793 aaKnown RBP23.18■■□□□ 1.3
CTNS-203ENST00000399306 C5P01031 1676 aa23.17■■□□□ 1.3
CTNS-203ENST00000399306 TTC5Q8N0Z6 440 aa23.17■■□□□ 1.3
CTNS-203ENST00000399306 RRP7AQ9Y3A4 280 aaKnown RBP23.17■■□□□ 1.3
CTNS-203ENST00000399306 KCPQ6ZWJ8 1503 aa23.17■■□□□ 1.3
CTNS-203ENST00000399306 NEUROD2Q15784 382 aa23.16■■□□□ 1.3
CTNS-203ENST00000399306 KDM3BQ7LBC6 1761 aa23.15■■□□□ 1.3
CTNS-203ENST00000399306 QSER1Q2KHR3 1735 aa23.14■■□□□ 1.3
CTNS-203ENST00000399306 ATP6V1AP38606 617 aa23.14■■□□□ 1.29
CTNS-203ENST00000399306 SLC39A6Q13433 755 aa23.14■■□□□ 1.29
CTNS-203ENST00000399306 RBM42Q9BTD8 480 aaKnown RBP23.14■■□□□ 1.29
CTNS-203ENST00000399306 AKT1S1Q96B36 256 aa23.13■■□□□ 1.29
CTNS-203ENST00000399306 FMNL2Q96PY5 1086 aa23.13■■□□□ 1.29
CTNS-203ENST00000399306 SLC4A9Q96Q91 983 aa23.13■■□□□ 1.29
CTNS-203ENST00000399306 TEX13AQ9BXU3 409 aaPredicted RBP23.13■■□□□ 1.29
CTNS-203ENST00000399306 STK32BQ9NY57 414 aa23.13■■□□□ 1.29
CTNS-203ENST00000399306 COL5A3P25940 1745 aaPredicted RBP23.13■■□□□ 1.29
CTNS-203ENST00000399306 PTCD1O75127 700 aaKnown RBP23.12■■□□□ 1.29
CTNS-203ENST00000399306 SLC15A2Q16348 729 aa23.12■■□□□ 1.29
CTNS-203ENST00000399306 THUMPD2Q9BTF0 503 aaKnown RBP23.12■■□□□ 1.29
CTNS-203ENST00000399306 C4BP0C0L5 1744 aa23.11■■□□□ 1.29
CTNS-203ENST00000399306 RC3H1Q5TC82 1133 aaKnown RBP23.11■■□□□ 1.29
CTNS-203ENST00000399306 HEG1Q9ULI3 1381 aa23.11■■□□□ 1.29
CTNS-203ENST00000399306 TJP1Q07157 1748 aa23.11■■□□□ 1.29
CTNS-203ENST00000399306 CHL1O00533 1208 aa23.1■■□□□ 1.29
CTNS-203ENST00000399306 ITPK1Q13572 414 aa23.1■■□□□ 1.29
CTNS-203ENST00000399306 ZNF496Q96IT1 587 aaPredicted RBP23.1■■□□□ 1.29
CTNS-203ENST00000399306 CFAP44Q96MT7 982 aa23.1■■□□□ 1.29
CTNS-203ENST00000399306 ANO8Q9HCE9 1232 aaPredicted RBP23.1■■□□□ 1.29
CTNS-203ENST00000399306 IL16Q14005 1332 aa23.09■■□□□ 1.29
CTNS-203ENST00000399306 CNTNAP4Q9C0A0 1308 aa23.09■■□□□ 1.29
CTNS-203ENST00000399306 WWC1Q8IX03 1113 aa23.09■■□□□ 1.29
CTNS-203ENST00000399306 IFT57Q9NWB7 429 aa23.08■■□□□ 1.29
CTNS-203ENST00000399306 ZNF853P0CG23 659 aa23.07■■□□□ 1.28
CTNS-203ENST00000399306 KCNQ4P56696 695 aa23.07■■□□□ 1.28
CTNS-203ENST00000399306 GNAI1P63096 354 aa23.07■■□□□ 1.28
CTNS-203ENST00000399306 WDR63Q8IWG1 891 aa23.07■■□□□ 1.28
CTNS-203ENST00000399306 LINC00116Q8NCU8 138 aa23.07■■□□□ 1.28
CTNS-203ENST00000399306 FLAD1Q8NFF5 587 aa23.07■■□□□ 1.28
CTNS-203ENST00000399306 TSPYL4Q9UJ04 414 aa23.07■■□□□ 1.28
CTNS-203ENST00000399306 ZNF827Q17R98 1081 aa23.06■■□□□ 1.28
CTNS-203ENST00000399306 UBR3Q6ZT12 1888 aa23.05■■□□□ 1.28
CTNS-203ENST00000399306 KCNQ3O43525 872 aa23.05■■□□□ 1.28
CTNS-203ENST00000399306 SNRPA1P09661 255 aaKnown RBP23.05■■□□□ 1.28
CTNS-203ENST00000399306 EIF4A1P60842 406 aaKnown RBP23.05■■□□□ 1.28
CTNS-203ENST00000399306 MYH14Q7Z406 1995 aaKnown RBP23.05■■□□□ 1.28
CTNS-203ENST00000399306 STARD3NLO95772 234 aa23.04■■□□□ 1.28
CTNS-203ENST00000399306 CYP19A1P11511 503 aaPredicted RBP23.04■■□□□ 1.28
CTNS-203ENST00000399306 DNAJC10Q8IXB1 793 aa23.04■■□□□ 1.28
CTNS-203ENST00000399306 AK7Q96M32 723 aa23.04■■□□□ 1.28
CTNS-203ENST00000399306 TUBGCP6Q96RT7 1819 aa23.03■■□□□ 1.28
CTNS-203ENST00000399306 SSFA2P28290 1259 aa23.03■■□□□ 1.28
CTNS-203ENST00000399306 R3HDM1Q15032 1099 aaKnown RBP23.03■■□□□ 1.28
CTNS-203ENST00000399306 MIS18AQ9NYP9 233 aa23.03■■□□□ 1.28
CTNS-203ENST00000399306 TFCP2L1Q9NZI6 479 aa23.03■■□□□ 1.28
CTNS-203ENST00000399306 ADRA2BP18089 450 aa23.02■■□□□ 1.28
CTNS-203ENST00000399306 CRKLP46109 303 aaKnown RBP23.01■■□□□ 1.27
CTNS-203ENST00000399306 ZNF521Q96K83 1311 aa23.01■■□□□ 1.27
CTNS-203ENST00000399306 LAMB4A4D0S4 1761 aa23.01■■□□□ 1.27
CTNS-203ENST00000399306 CASZ1Q86V15 1759 aa23.01■■□□□ 1.27
CTNS-203ENST00000399306 GIGYF1O75420 1035 aaPredicted RBP23■■□□□ 1.27
CTNS-203ENST00000399306 RPS6KA4O75676 772 aa23■■□□□ 1.27
CTNS-203ENST00000399306 HOXB7P09629 217 aa23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms