RNA–Protein interactions for RNA: ENST00000399220.2

CX3CR1-202, Transcript of C-X3-C motif chemokine receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CX3CR1, Length 3,106 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1-202ENST00000399220 DDX17Q92841 729 aaKnown RBP8.72□□□□□ -1.01
CX3CR1-202ENST00000399220 SPG7Q9UQ90 795 aa8.72□□□□□ -1.01
CX3CR1-202ENST00000399220 NUP188Q5SRE5 1749 aa8.72□□□□□ -1.01
CX3CR1-202ENST00000399220 KCPQ6ZWJ8 1503 aa8.72□□□□□ -1.01
CX3CR1-202ENST00000399220 ZBTB7BO15156 539 aaPredicted RBP8.71□□□□□ -1.01
CX3CR1-202ENST00000399220 HSP90AB1P08238 724 aaKnown RBP8.71□□□□□ -1.01
CX3CR1-202ENST00000399220 EIF4A1P60842 406 aaKnown RBP8.71□□□□□ -1.01
CX3CR1-202ENST00000399220 TSPYL4Q9UJ04 414 aa8.71□□□□□ -1.01
CX3CR1-202ENST00000399220 PHKG2P15735 406 aa8.71□□□□□ -1.01
CX3CR1-202ENST00000399220 SLIT2O94813 1529 aa8.71□□□□□ -1.02
CX3CR1-202ENST00000399220 TUBGCP6Q96RT7 1819 aa8.71□□□□□ -1.02
CX3CR1-202ENST00000399220 COG6Q9Y2V7 657 aa8.71□□□□□ -1.02
CX3CR1-202ENST00000399220 TATP17735 454 aaPredicted RBP8.7□□□□□ -1.02
CX3CR1-202ENST00000399220 CANXP27824 592 aaKnown RBP8.7□□□□□ -1.02
CX3CR1-202ENST00000399220 ZNF530Q6P9A1 599 aaPredicted RBP8.7□□□□□ -1.02
CX3CR1-202ENST00000399220 TMEM57Q8N5G2 664 aa8.7□□□□□ -1.02
CX3CR1-202ENST00000399220 USHBP1Q8N6Y0 703 aa8.7□□□□□ -1.02
CX3CR1-202ENST00000399220 CCDC30Q5VVM6 783 aa8.69□□□□□ -1.02
CX3CR1-202ENST00000399220 IFNL2Q8IZJ0 200 aa8.69□□□□□ -1.02
CX3CR1-202ENST00000399220 DCAF5Q96JK2 942 aa8.69□□□□□ -1.02
CX3CR1-202ENST00000399220 TNNQ9UQP3 1299 aa8.69□□□□□ -1.02
CX3CR1-202ENST00000399220 ZC3H6P61129 1189 aaKnown RBP8.69□□□□□ -1.02
CX3CR1-202ENST00000399220 C1orf141Q5JVX7 400 aa8.69□□□□□ -1.02
CX3CR1-202ENST00000399220 SMC5Q8IY18 1101 aa8.69□□□□□ -1.02
CX3CR1-202ENST00000399220 FTSJ3Q8IY81 847 aaKnown RBP8.69□□□□□ -1.02
CX3CR1-202ENST00000399220 FRAT1Q92837 279 aaPredicted RBP8.69□□□□□ -1.02
CX3CR1-202ENST00000399220 PCDHB15Q9Y5E8 787 aa8.69□□□□□ -1.02
CX3CR1-202ENST00000399220 ARFGEF2Q9Y6D5 1785 aa8.69□□□□□ -1.02
CX3CR1-202ENST00000399220 PCDH11XQ9BZA7 1347 aa8.69□□□□□ -1.02
CX3CR1-202ENST00000399220 PCDH11YQ9BZA8 1340 aa8.69□□□□□ -1.02
CX3CR1-202ENST00000399220 RAPGEF4Q8WZA2 1011 aa8.69□□□□□ -1.02
CX3CR1-202ENST00000399220 LTV1Q96GA3 475 aaPredicted RBP8.69□□□□□ -1.02
CX3CR1-202ENST00000399220 RWDD1Q9H446 243 aaPredicted RBP8.69□□□□□ -1.02
CX3CR1-202ENST00000399220 IGHDP01880 384 aa8.68□□□□□ -1.02
CX3CR1-202ENST00000399220 SLC52A2Q9HAB3 445 aa8.68□□□□□ -1.02
CX3CR1-202ENST00000399220 LGR6Q9HBX8 967 aa8.68□□□□□ -1.02
CX3CR1-202ENST00000399220 LAS1LQ9Y4W2 734 aaKnown RBP8.68□□□□□ -1.02
CX3CR1-202ENST00000399220 THSD7AQ9UPZ6 1657 aa8.68□□□□□ -1.02
CX3CR1-202ENST00000399220 ERVV-2B6SEH9 535 aa8.68□□□□□ -1.02
CX3CR1-202ENST00000399220 BCL2L13Q9BXK5 485 aa8.67□□□□□ -1.02
CX3CR1-202ENST00000399220 THRAP3Q9Y2W1 955 aaKnown RBP8.67□□□□□ -1.02
CX3CR1-202ENST00000399220 ERBB4Q15303 1308 aa8.67□□□□□ -1.02
CX3CR1-202ENST00000399220 CCT4P50991 539 aaKnown RBP8.67□□□□□ -1.02
CX3CR1-202ENST00000399220 TJP1Q07157 1748 aa8.67□□□□□ -1.02
CX3CR1-202ENST00000399220 CABLES1Q8TDN4 633 aa8.67□□□□□ -1.02
CX3CR1-202ENST00000399220 CYP27B1O15528 508 aa8.67□□□□□ -1.02
CX3CR1-202ENST00000399220 COL15A1P39059 1388 aa8.66□□□□□ -1.02
CX3CR1-202ENST00000399220 LMOD2Q6P5Q4 547 aa8.66□□□□□ -1.02
CX3CR1-202ENST00000399220 CDCA7Q9BWT1 371 aaPredicted RBP8.66□□□□□ -1.02
CX3CR1-202ENST00000399220 PRDM11Q9NQV5 511 aa8.66□□□□□ -1.02
CX3CR1-202ENST00000399220 DOT1LQ8TEK3 1739 aa8.66□□□□□ -1.02
CX3CR1-202ENST00000399220 GIGYF1O75420 1035 aaPredicted RBP8.66□□□□□ -1.02
CX3CR1-202ENST00000399220 BTBD11A6QL63 1104 aa8.65□□□□□ -1.02
CX3CR1-202ENST00000399220 MSH5O43196 834 aa8.65□□□□□ -1.02
CX3CR1-202ENST00000399220 IL2RBP14784 551 aa8.65□□□□□ -1.02
CX3CR1-202ENST00000399220 KRT24Q2M2I5 525 aa8.65□□□□□ -1.02
CX3CR1-202ENST00000399220 GCC1Q96CN9 775 aa8.65□□□□□ -1.02
CX3CR1-202ENST00000399220 TOM1O60784 492 aa8.65□□□□□ -1.02
CX3CR1-202ENST00000399220 TEFQ10587 303 aa8.65□□□□□ -1.02
CX3CR1-202ENST00000399220 NLRP2Q9NX02 1062 aa8.65□□□□□ -1.02
CX3CR1-202ENST00000399220 BCL9O00512 1426 aa8.65□□□□□ -1.03
CX3CR1-202ENST00000399220 ANKRD36CQ5JPF3 1778 aa8.65□□□□□ -1.03
CX3CR1-202ENST00000399220 ITPRIPQ8IWB1 547 aa8.65□□□□□ -1.03
CX3CR1-202ENST00000399220 RPAP2Q8IXW5 612 aaPredicted RBP8.65□□□□□ -1.03
CX3CR1-202ENST00000399220 COL5A3P25940 1745 aaPredicted RBP8.64□□□□□ -1.03
CX3CR1-202ENST00000399220 SLC4A2P04920 1241 aa8.64□□□□□ -1.03
CX3CR1-202ENST00000399220 CHRNA2Q15822 529 aa8.64□□□□□ -1.03
CX3CR1-202ENST00000399220 ZCRB1Q8TBF4 217 aaKnown RBP8.64□□□□□ -1.03
CX3CR1-202ENST00000399220 STK31Q9BXU1 1019 aa8.64□□□□□ -1.03
CX3CR1-202ENST00000399220 FLIIQ13045 1269 aa8.64□□□□□ -1.03
CX3CR1-202ENST00000399220 ZNF790Q6PG37 636 aa8.64□□□□□ -1.03
CX3CR1-202ENST00000399220 MPRIPQ6WCQ1 1025 aa8.64□□□□□ -1.03
CX3CR1-202ENST00000399220 LRP10Q7Z4F1 713 aa8.64□□□□□ -1.03
CX3CR1-202ENST00000399220 BACH2Q9BYV9 841 aa8.64□□□□□ -1.03
CX3CR1-202ENST00000399220 UTYO14607 1347 aa8.64□□□□□ -1.03
CX3CR1-202ENST00000399220 AFDNP55196 1824 aaKnown RBP8.64□□□□□ -1.03
CX3CR1-202ENST00000399220 NUCB1Q02818 461 aa8.63□□□□□ -1.03
CX3CR1-202ENST00000399220 ANKRD44Q8N8A2 993 aa8.63□□□□□ -1.03
CX3CR1-202ENST00000399220 DBF4Q9UBU7 674 aaPredicted RBP8.63□□□□□ -1.03
CX3CR1-202ENST00000399220 BARGINQ6ZT62 677 aa8.63□□□□□ -1.03
CX3CR1-202ENST00000399220 MIS18AQ9NYP9 233 aa8.63□□□□□ -1.03
CX3CR1-202ENST00000399220 ADCY9O60503 1353 aa8.63□□□□□ -1.03
CX3CR1-202ENST00000399220 JCADQ9P266 1359 aa8.63□□□□□ -1.03
CX3CR1-202ENST00000399220 PDIA6Q15084 440 aa8.63□□□□□ -1.03
CX3CR1-202ENST00000399220 NHSQ6T4R5 1651 aa8.62□□□□□ -1.03
CX3CR1-202ENST00000399220 SIRT2Q8IXJ6 389 aa8.62□□□□□ -1.03
CX3CR1-202ENST00000399220 VSIG10Q8N0Z9 540 aa8.62□□□□□ -1.03
CX3CR1-202ENST00000399220 DDX21Q9NR30 783 aaKnown RBP eCLIP8.62□□□□□ -1.03
CX3CR1-202ENST00000399220 HYPKQ9NX55 129 aa8.62□□□□□ -1.03
CX3CR1-202ENST00000399220 HDGFL1Q5TGJ6 251 aa8.62□□□□□ -1.03
CX3CR1-202ENST00000399220 LARP1Q6PKG0 1096 aaKnown RBP8.62□□□□□ -1.03
CX3CR1-202ENST00000399220 G2E3Q7L622 706 aa8.62□□□□□ -1.03
CX3CR1-202ENST00000399220 DCTPP1Q9H773 170 aa8.62□□□□□ -1.03
CX3CR1-202ENST00000399220 SPATA31A1Q5TZJ5 1347 aa8.61□□□□□ -1.03
CX3CR1-202ENST00000399220 SPATA31A6Q5VVP1 1343 aa8.61□□□□□ -1.03
CX3CR1-202ENST00000399220 ELL2O00472 640 aaPredicted RBP8.61□□□□□ -1.03
CX3CR1-202ENST00000399220 CSB-PGBD3P0DP91 1061 aa8.61□□□□□ -1.03
CX3CR1-202ENST00000399220 ALDH1L1O75891 902 aa8.61□□□□□ -1.03
CX3CR1-202ENST00000399220 TOM1L2Q6ZVM7 507 aa8.61□□□□□ -1.03
CX3CR1-202ENST00000399220 KCNQ3O43525 872 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms