RNA–Protein interactions for RNA: ENST00000399132.5

COL25A1-203, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS P4 TSL 5 BASIC

Gene COL25A1, Length 2,724 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-203ENST00000399132 PRAMEF22A3QJZ6 481 aa18.79■□□□□ 0.6
COL25A1-203ENST00000399132 OTUD7AQ8TE49 926 aaPredicted RBP18.79■□□□□ 0.6
COL25A1-203ENST00000399132 CEP85Q6P2H3 762 aa18.78■□□□□ 0.6
COL25A1-203ENST00000399132 GCC1Q96CN9 775 aa18.77■□□□□ 0.6
COL25A1-203ENST00000399132 PXDNQ92626 1479 aa18.77■□□□□ 0.6
COL25A1-203ENST00000399132 ZNF335Q9H4Z2 1342 aaPredicted RBP18.77■□□□□ 0.6
COL25A1-203ENST00000399132 MST1RQ04912 1400 aa18.77■□□□□ 0.59
COL25A1-203ENST00000399132 STRCP1A6NGW2 1772 aa18.77■□□□□ 0.59
COL25A1-203ENST00000399132 CHPF2Q9P2E5 772 aa18.77■□□□□ 0.59
COL25A1-203ENST00000399132 CADPS2Q86UW7 1296 aa18.76■□□□□ 0.59
COL25A1-203ENST00000399132 KDM4FA0A1W2PPD8 638 aa18.76■□□□□ 0.59
COL25A1-203ENST00000399132 AEBP2Q6ZN18 517 aaPredicted RBP18.76■□□□□ 0.59
COL25A1-203ENST00000399132 AKAP4Q5JQC9 854 aa18.75■□□□□ 0.59
COL25A1-203ENST00000399132 ERBB3P21860 1342 aa18.75■□□□□ 0.59
COL25A1-203ENST00000399132 EIF4A1P60842 406 aaKnown RBP18.75■□□□□ 0.59
COL25A1-203ENST00000399132 SLC39A6Q13433 755 aa18.75■□□□□ 0.59
COL25A1-203ENST00000399132 RNMTO43148 476 aaKnown RBP18.74■□□□□ 0.59
COL25A1-203ENST00000399132 ANKRD44Q8N8A2 993 aa18.74■□□□□ 0.59
COL25A1-203ENST00000399132 SLKQ9H2G2 1235 aaPredicted RBP18.74■□□□□ 0.59
COL25A1-203ENST00000399132 EXOC6BQ9Y2D4 811 aa18.74■□□□□ 0.59
COL25A1-203ENST00000399132 RAPGEF4Q8WZA2 1011 aa18.73■□□□□ 0.59
COL25A1-203ENST00000399132 NPHP3Q7Z494 1330 aa18.72■□□□□ 0.59
COL25A1-203ENST00000399132 TSHZ3Q63HK5 1081 aa18.72■□□□□ 0.59
COL25A1-203ENST00000399132 TBC1D32Q96NH3 1257 aa18.72■□□□□ 0.59
COL25A1-203ENST00000399132 DCTPP1Q9H773 170 aa18.72■□□□□ 0.59
COL25A1-203ENST00000399132 ATP10DQ9P241 1426 aa18.72■□□□□ 0.59
COL25A1-203ENST00000399132 CCT4P50991 539 aaKnown RBP18.72■□□□□ 0.59
COL25A1-203ENST00000399132 C22orf23Q9BZE7 217 aa18.72■□□□□ 0.59
COL25A1-203ENST00000399132 RGPD5Q99666 1765 aa18.71■□□□□ 0.59
COL25A1-203ENST00000399132 CEMIPQ8WUJ3 1361 aa18.71■□□□□ 0.59
COL25A1-203ENST00000399132 AMOTQ4VCS5 1084 aa18.71■□□□□ 0.59
COL25A1-203ENST00000399132 BRINP3Q76B58 766 aa18.71■□□□□ 0.59
COL25A1-203ENST00000399132 USP35Q9P2H5 1018 aa18.71■□□□□ 0.59
COL25A1-203ENST00000399132 USP54Q70EL1 1684 aa18.7■□□□□ 0.58
COL25A1-203ENST00000399132 PIP4K2AP48426 406 aaPredicted RBP18.7■□□□□ 0.58
COL25A1-203ENST00000399132 PROSER3Q2NL68 480 aa18.7■□□□□ 0.58
COL25A1-203ENST00000399132 LRRFIP2Q9Y608 721 aaKnown RBP18.7■□□□□ 0.58
COL25A1-203ENST00000399132 MED1Q15648 1581 aaPredicted RBP18.7■□□□□ 0.58
COL25A1-203ENST00000399132 PNMA6EA0A0J9YXQ4 647 aa18.7■□□□□ 0.58
COL25A1-203ENST00000399132 AIMP1Q12904 312 aaKnown RBP18.7■□□□□ 0.58
COL25A1-203ENST00000399132 PI4KAP2A4QPH2 592 aa18.69■□□□□ 0.58
COL25A1-203ENST00000399132 RPAP2Q8IXW5 612 aaPredicted RBP18.69■□□□□ 0.58
COL25A1-203ENST00000399132 PI4KAP1Q8N8J0 262 aa18.69■□□□□ 0.58
COL25A1-203ENST00000399132 GNAI2P04899 355 aa18.69■□□□□ 0.58
COL25A1-203ENST00000399132 PLEKHM2Q8IWE5 1019 aa18.69■□□□□ 0.58
COL25A1-203ENST00000399132 TRPM3Q9HCF6 1732 aaPredicted RBP18.69■□□□□ 0.58
COL25A1-203ENST00000399132 SLIT3O75094 1523 aa18.68■□□□□ 0.58
COL25A1-203ENST00000399132 GSPT1P15170 499 aaKnown RBP18.68■□□□□ 0.58
COL25A1-203ENST00000399132 NFATC2IPQ8NCF5 419 aa18.68■□□□□ 0.58
COL25A1-203ENST00000399132 VIRMAQ69YN4 1812 aaKnown RBP18.67■□□□□ 0.58
COL25A1-203ENST00000399132 ZMYND15Q9H091 742 aa18.67■□□□□ 0.58
COL25A1-203ENST00000399132 TATP17735 454 aaPredicted RBP18.66■□□□□ 0.58
COL25A1-203ENST00000399132 TBC1D9Q6ZT07 1266 aa18.66■□□□□ 0.58
COL25A1-203ENST00000399132 LRRC37A3O60309 1634 aa18.66■□□□□ 0.58
COL25A1-203ENST00000399132 BMP2KLQ5H9B9 411 aa18.66■□□□□ 0.58
COL25A1-203ENST00000399132 USP44Q9H0E7 712 aa18.66■□□□□ 0.58
COL25A1-203ENST00000399132 SLAIN2Q9P270 581 aa18.66■□□□□ 0.58
COL25A1-203ENST00000399132 PRDM11Q9NQV5 511 aa18.65■□□□□ 0.58
COL25A1-203ENST00000399132 STRN4Q9NRL3 753 aa18.65■□□□□ 0.58
COL25A1-203ENST00000399132 SPATA31A3Q5VYP0 1347 aa18.65■□□□□ 0.58
COL25A1-203ENST00000399132 MYL6BP14649 208 aa18.65■□□□□ 0.58
COL25A1-203ENST00000399132 NBPF7P0C2Y1 421 aaPredicted RBP18.65■□□□□ 0.58
COL25A1-203ENST00000399132 UBTFL1P0CB47 393 aaPredicted RBP18.65■□□□□ 0.58
COL25A1-203ENST00000399132 TBC1D2Q9BYX2 928 aa18.65■□□□□ 0.58
COL25A1-203ENST00000399132 GLIPR1L2Q4G1C9 344 aa18.64■□□□□ 0.57
COL25A1-203ENST00000399132 HMMRO75330 724 aa18.63■□□□□ 0.57
COL25A1-203ENST00000399132 GIGYF1O75420 1035 aaPredicted RBP18.63■□□□□ 0.57
COL25A1-203ENST00000399132 SRCIN1Q9C0H9 1055 aa18.63■□□□□ 0.57
COL25A1-203ENST00000399132 TNS3Q68CZ2 1445 aa18.63■□□□□ 0.57
COL25A1-203ENST00000399132 BECN1Q14457 450 aa18.63■□□□□ 0.57
COL25A1-203ENST00000399132 IL1RAPL2Q9NP60 686 aa18.63■□□□□ 0.57
COL25A1-203ENST00000399132 TOM1L2Q6ZVM7 507 aa18.62■□□□□ 0.57
COL25A1-203ENST00000399132 MEGF6O75095 1541 aa18.62■□□□□ 0.57
COL25A1-203ENST00000399132 GNAI3P08754 354 aa18.62■□□□□ 0.57
COL25A1-203ENST00000399132 CWF19L2Q2TBE0 894 aaKnown RBP18.62■□□□□ 0.57
COL25A1-203ENST00000399132 BABAM1Q9NWV8 329 aa18.62■□□□□ 0.57
COL25A1-203ENST00000399132 KIF1AQ12756 1690 aa18.62■□□□□ 0.57
COL25A1-203ENST00000399132 CYP27B1O15528 508 aa18.61■□□□□ 0.57
COL25A1-203ENST00000399132 PHKG2P15735 406 aa18.61■□□□□ 0.57
COL25A1-203ENST00000399132 DNAAF4Q8WXU2 420 aa18.61■□□□□ 0.57
COL25A1-203ENST00000399132 MAP3K2Q9Y2U5 619 aa18.61■□□□□ 0.57
COL25A1-203ENST00000399132 FAM208AQ9UK61 1670 aaKnown RBP18.61■□□□□ 0.57
COL25A1-203ENST00000399132 NFKBIBQ15653 356 aa18.6■□□□□ 0.57
COL25A1-203ENST00000399132 VSIG10Q8N0Z9 540 aa18.6■□□□□ 0.57
COL25A1-203ENST00000399132 LMTK3Q96Q04 1460 aa18.6■□□□□ 0.57
COL25A1-203ENST00000399132 TTC22Q5TAA0 569 aa18.6■□□□□ 0.57
COL25A1-203ENST00000399132 RBM42Q9BTD8 480 aaKnown RBP18.6■□□□□ 0.57
COL25A1-203ENST00000399132 SPG7Q9UQ90 795 aa18.6■□□□□ 0.57
COL25A1-203ENST00000399132 ALS2Q96Q42 1657 aa18.6■□□□□ 0.57
COL25A1-203ENST00000399132 ZNF790Q6PG37 636 aa18.59■□□□□ 0.57
COL25A1-203ENST00000399132 DBF4Q9UBU7 674 aaPredicted RBP18.59■□□□□ 0.57
COL25A1-203ENST00000399132 PPP1R42Q7Z4L9 355 aa18.59■□□□□ 0.57
COL25A1-203ENST00000399132 DDX54Q8TDD1 881 aaKnown RBP18.59■□□□□ 0.57
COL25A1-203ENST00000399132 FRAT2O75474 233 aaPredicted RBP18.58■□□□□ 0.57
COL25A1-203ENST00000399132 SDSP20132 328 aa18.58■□□□□ 0.57
COL25A1-203ENST00000399132 JARID2Q92833 1246 aaPredicted RBP18.58■□□□□ 0.57
COL25A1-203ENST00000399132 SLC52A2Q9HAB3 445 aa18.58■□□□□ 0.57
COL25A1-203ENST00000399132 ZNF496Q96IT1 587 aaPredicted RBP18.58■□□□□ 0.56
COL25A1-203ENST00000399132 FOXD4L1Q9NU39 408 aa18.58■□□□□ 0.56
COL25A1-203ENST00000399132 SRGAP3O43295 1099 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms