RNA–Protein interactions for RNA: ENST00000398493.5

MBD1-208, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 5 BASIC

Gene MBD1, Length 1,845 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-208ENST00000398493 NKX1-1Q15270 411 aaPredicted RBP23.56■■□□□ 1.36
MBD1-208ENST00000398493 LGR6Q9HBX8 967 aa23.56■■□□□ 1.36
MBD1-208ENST00000398493 GNAT3A8MTJ3 354 aa23.54■■□□□ 1.36
MBD1-208ENST00000398493 LMOD3Q0VAK6 560 aa23.54■■□□□ 1.36
MBD1-208ENST00000398493 DCTN1Q14203 1278 aa23.54■■□□□ 1.36
MBD1-208ENST00000398493 ACSBG1Q96GR2 724 aa23.54■■□□□ 1.36
MBD1-208ENST00000398493 KDM6AO15550 1401 aaPredicted RBP23.53■■□□□ 1.36
MBD1-208ENST00000398493 IL17REQ8NFR9 667 aa23.53■■□□□ 1.36
MBD1-208ENST00000398493 MAP3K5Q99683 1374 aa23.53■■□□□ 1.36
MBD1-208ENST00000398493 PTF1AQ7RTS3 328 aa23.52■■□□□ 1.36
MBD1-208ENST00000398493 FANCIQ9NVI1 1328 aa23.52■■□□□ 1.36
MBD1-208ENST00000398493 MCM10Q7L590 875 aa23.52■■□□□ 1.36
MBD1-208ENST00000398493 KCNQ2O43526 872 aa23.51■■□□□ 1.35
MBD1-208ENST00000398493 DCAF5Q96JK2 942 aa23.51■■□□□ 1.35
MBD1-208ENST00000398493 RNMTO43148 476 aaKnown RBP23.5■■□□□ 1.35
MBD1-208ENST00000398493 FAM196AQ6ZSG2 479 aa23.5■■□□□ 1.35
MBD1-208ENST00000398493 THUMPD2Q9BTF0 503 aaKnown RBP23.5■■□□□ 1.35
MBD1-208ENST00000398493 HSP90AB1P08238 724 aaKnown RBP23.49■■□□□ 1.35
MBD1-208ENST00000398493 FRAT1Q92837 279 aaPredicted RBP23.49■■□□□ 1.35
MBD1-208ENST00000398493 BCL9O00512 1426 aa23.48■■□□□ 1.35
MBD1-208ENST00000398493 MS4A1P11836 297 aa23.48■■□□□ 1.35
MBD1-208ENST00000398493 PRIM1P49642 420 aaKnown RBP23.48■■□□□ 1.35
MBD1-208ENST00000398493 EXOSC9Q06265 439 aaKnown RBP23.48■■□□□ 1.35
MBD1-208ENST00000398493 AAMPQ13685 434 aa23.48■■□□□ 1.35
MBD1-208ENST00000398493 TSR2Q969E8 191 aaKnown RBP23.48■■□□□ 1.35
MBD1-208ENST00000398493 RTF1Q92541 710 aaKnown RBP23.47■■□□□ 1.35
MBD1-208ENST00000398493 SYTL4Q96C24 671 aaPredicted RBP23.47■■□□□ 1.35
MBD1-208ENST00000398493 DLG5Q8TDM6 1919 aa23.46■■□□□ 1.35
MBD1-208ENST00000398493 TOGARAM1Q9Y4F4 1720 aa23.46■■□□□ 1.35
MBD1-208ENST00000398493 TCERG1O14776 1098 aaKnown RBP23.45■■□□□ 1.34
MBD1-208ENST00000398493 HTATSF1O43719 755 aaKnown RBP23.45■■□□□ 1.34
MBD1-208ENST00000398493 TRIM37O94972 964 aa23.45■■□□□ 1.34
MBD1-208ENST00000398493 CENPQQ7L2Z9 268 aaPredicted RBP23.45■■□□□ 1.34
MBD1-208ENST00000398493 CEMIPQ8WUJ3 1361 aa23.45■■□□□ 1.34
MBD1-208ENST00000398493 GNAI1P63096 354 aa23.45■■□□□ 1.34
MBD1-208ENST00000398493 NFATC2IPQ8NCF5 419 aa23.45■■□□□ 1.34
MBD1-208ENST00000398493 ERVV-2B6SEH9 535 aa23.43■■□□□ 1.34
MBD1-208ENST00000398493 PIGBQ92521 554 aa23.43■■□□□ 1.34
MBD1-208ENST00000398493 ZNF428Q96B54 188 aa23.43■■□□□ 1.34
MBD1-208ENST00000398493 ADAMTS7Q9UKP4 1686 aa23.43■■□□□ 1.34
MBD1-208ENST00000398493 SLC52A2Q9HAB3 445 aa23.43■■□□□ 1.34
MBD1-208ENST00000398493 IFT57Q9NWB7 429 aa23.43■■□□□ 1.34
MBD1-208ENST00000398493 DOT1LQ8TEK3 1739 aa23.42■■□□□ 1.34
MBD1-208ENST00000398493 KAT6BQ8WYB5 2073 aa23.42■■□□□ 1.34
MBD1-208ENST00000398493 CABP4P57796 275 aa23.42■■□□□ 1.34
MBD1-208ENST00000398493 ZKSCAN2Q63HK3 967 aa23.42■■□□□ 1.34
MBD1-208ENST00000398493 SMC4Q9NTJ3 1288 aa23.41■■□□□ 1.34
MBD1-208ENST00000398493 LAS1LQ9Y4W2 734 aaKnown RBP23.41■■□□□ 1.34
MBD1-208ENST00000398493 SCN11AQ9UI33 1791 aa23.41■■□□□ 1.34
MBD1-208ENST00000398493 PANK1Q8TE04 598 aa23.4■■□□□ 1.34
MBD1-208ENST00000398493 BCL2L13Q9BXK5 485 aa23.4■■□□□ 1.34
MBD1-208ENST00000398493 BCL11BQ9C0K0 894 aaPredicted RBP23.4■■□□□ 1.34
MBD1-208ENST00000398493 TMOD3Q9NYL9 352 aa23.4■■□□□ 1.34
MBD1-208ENST00000398493 SBF2Q86WG5 1849 aa23.39■■□□□ 1.34
MBD1-208ENST00000398493 ALDH1L2Q3SY69 923 aa23.39■■□□□ 1.33
MBD1-208ENST00000398493 COG6Q9Y2V7 657 aa23.39■■□□□ 1.33
MBD1-208ENST00000398493 TEFQ10587 303 aa23.38■■□□□ 1.33
MBD1-208ENST00000398493 MIS18AQ9NYP9 233 aa23.38■■□□□ 1.33
MBD1-208ENST00000398493 KDM2BQ8NHM5 1336 aa23.38■■□□□ 1.33
MBD1-208ENST00000398493 MRC1P22897 1456 aa23.38■■□□□ 1.33
MBD1-208ENST00000398493 IPO8O15397 1037 aaKnown RBP23.38■■□□□ 1.33
MBD1-208ENST00000398493 CLUAP1Q96AJ1 413 aa23.37■■□□□ 1.33
MBD1-208ENST00000398493 CFAP44Q96MT7 982 aa23.37■■□□□ 1.33
MBD1-208ENST00000398493 ASAP1Q9ULH1 1129 aa23.36■■□□□ 1.33
MBD1-208ENST00000398493 ITGB4P16144 1822 aa23.36■■□□□ 1.33
MBD1-208ENST00000398493 VIRMAQ69YN4 1812 aaKnown RBP23.36■■□□□ 1.33
MBD1-208ENST00000398493 NHSQ6T4R5 1651 aa23.36■■□□□ 1.33
MBD1-208ENST00000398493 ZNF853P0CG23 659 aa23.36■■□□□ 1.33
MBD1-208ENST00000398493 SLC39A6Q13433 755 aa23.36■■□□□ 1.33
MBD1-208ENST00000398493 FTSJ3Q8IY81 847 aaKnown RBP23.36■■□□□ 1.33
MBD1-208ENST00000398493 SSH1Q8WYL5 1049 aa23.36■■□□□ 1.33
MBD1-208ENST00000398493 DZIP1LQ8IYY4 767 aaKnown RBP23.35■■□□□ 1.33
MBD1-208ENST00000398493 KIF16BQ96L93 1317 aa23.35■■□□□ 1.33
MBD1-208ENST00000398493 TAF7Q15545 349 aaPredicted RBP23.34■■□□□ 1.33
MBD1-208ENST00000398493 ATG3Q9NT62 314 aa23.34■■□□□ 1.33
MBD1-208ENST00000398493 KCNQ3O43525 872 aa23.33■■□□□ 1.33
MBD1-208ENST00000398493 BTBD11A6QL63 1104 aa23.33■■□□□ 1.32
MBD1-208ENST00000398493 APBA3O96018 575 aa23.33■■□□□ 1.32
MBD1-208ENST00000398493 UPF1Q92900 1129 aaKnown RBP eCLIP23.33■■□□□ 1.32
MBD1-208ENST00000398493 BRPF1P55201 1214 aaPredicted RBP23.31■■□□□ 1.32
MBD1-208ENST00000398493 MVPQ14764 893 aaKnown RBP23.31■■□□□ 1.32
MBD1-208ENST00000398493 ATF7IPQ6VMQ6 1270 aa23.31■■□□□ 1.32
MBD1-208ENST00000398493 MBIPQ9NS73 344 aa23.31■■□□□ 1.32
MBD1-208ENST00000398493 BTAF1O14981 1849 aa23.3■■□□□ 1.32
MBD1-208ENST00000398493 SIPA1L3O60292 1781 aaPredicted RBP23.3■■□□□ 1.32
MBD1-208ENST00000398493 RLBP1P12271 317 aa23.29■■□□□ 1.32
MBD1-208ENST00000398493 NOB1Q9ULX3 412 aaKnown RBP23.29■■□□□ 1.32
MBD1-208ENST00000398493 CHL1O00533 1208 aa23.29■■□□□ 1.32
MBD1-208ENST00000398493 VAMP4O75379 141 aa23.29■■□□□ 1.32
MBD1-208ENST00000398493 ZNF790Q6PG37 636 aa23.29■■□□□ 1.32
MBD1-208ENST00000398493 DEFB132Q7Z7B7 95 aa23.29■■□□□ 1.32
MBD1-208ENST00000398493 TNS1Q9HBL0 1735 aaKnown RBP23.28■■□□□ 1.32
MBD1-208ENST00000398493 TSPYL4Q9UJ04 414 aa23.27■■□□□ 1.32
MBD1-208ENST00000398493 PALLDQ8WX93 1383 aa23.27■■□□□ 1.32
MBD1-208ENST00000398493 PTCD1O75127 700 aaKnown RBP23.26■■□□□ 1.31
MBD1-208ENST00000398493 EN1Q05925 392 aaPredicted RBP23.26■■□□□ 1.31
MBD1-208ENST00000398493 PROM2Q8N271 834 aa23.26■■□□□ 1.31
MBD1-208ENST00000398493 SLC4A9Q96Q91 983 aa23.26■■□□□ 1.31
MBD1-208ENST00000398493 DDX19BQ9UMR2 479 aa23.26■■□□□ 1.31
MBD1-208ENST00000398493 TRIM27P14373 513 aa23.26■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms