RNA–Protein interactions for RNA: ENST00000398035.6

COLCA2-201, Transcript of colorectal cancer associated 2, humanhuman

TSL 1 (best) BASIC

Gene COLCA2, Length 1,414 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-201ENST00000398035 RTF1Q92541 710 aaKnown RBP24.96■■□□□ 1.59
COLCA2-201ENST00000398035 FLAD1Q8NFF5 587 aa24.95■■□□□ 1.59
COLCA2-201ENST00000398035 SLC16A10Q8TF71 515 aa24.95■■□□□ 1.59
COLCA2-201ENST00000398035 TEFQ10587 303 aa24.95■■□□□ 1.58
COLCA2-201ENST00000398035 RBM42Q9BTD8 480 aaKnown RBP24.95■■□□□ 1.58
COLCA2-201ENST00000398035 IL17REQ8NFR9 667 aa24.94■■□□□ 1.58
COLCA2-201ENST00000398035 PLEKHF1Q96S99 279 aa24.93■■□□□ 1.58
COLCA2-201ENST00000398035 WDR43Q15061 677 aaKnown RBP eCLIP24.92■■□□□ 1.58
COLCA2-201ENST00000398035 MTFR1LQ9H019 292 aa24.92■■□□□ 1.58
COLCA2-201ENST00000398035 MAPK8IP3Q9UPT6 1336 aa24.92■■□□□ 1.58
COLCA2-201ENST00000398035 TOGARAM1Q9Y4F4 1720 aa24.91■■□□□ 1.58
COLCA2-201ENST00000398035 ANP32CO43423 234 aa24.91■■□□□ 1.58
COLCA2-201ENST00000398035 AK7Q96M32 723 aa24.91■■□□□ 1.58
COLCA2-201ENST00000398035 PTCD1O75127 700 aaKnown RBP24.9■■□□□ 1.58
COLCA2-201ENST00000398035 RC3H1Q5TC82 1133 aaKnown RBP24.88■■□□□ 1.57
COLCA2-201ENST00000398035 TTC5Q8N0Z6 440 aa24.88■■□□□ 1.57
COLCA2-201ENST00000398035 PDGFDQ9GZP0 370 aaPredicted RBP24.88■■□□□ 1.57
COLCA2-201ENST00000398035 PNPLA7Q6ZV29 1317 aa24.88■■□□□ 1.57
COLCA2-201ENST00000398035 CEMIPQ8WUJ3 1361 aa24.88■■□□□ 1.57
COLCA2-201ENST00000398035 ZBTB7AO95365 584 aa24.87■■□□□ 1.57
COLCA2-201ENST00000398035 ITPK1Q13572 414 aa24.87■■□□□ 1.57
COLCA2-201ENST00000398035 LY75O60449 1722 aa24.87■■□□□ 1.57
COLCA2-201ENST00000398035 PAPPAQ13219 1627 aa24.87■■□□□ 1.57
COLCA2-201ENST00000398035 NFE2L2Q16236 605 aa24.86■■□□□ 1.57
COLCA2-201ENST00000398035 LINC00116Q8NCU8 138 aa24.86■■□□□ 1.57
COLCA2-201ENST00000398035 VSIG10Q8N0Z9 540 aa24.86■■□□□ 1.57
COLCA2-201ENST00000398035 SLC4A9Q96Q91 983 aa24.86■■□□□ 1.57
COLCA2-201ENST00000398035 ITGB4P16144 1822 aa24.85■■□□□ 1.57
COLCA2-201ENST00000398035 MSH5O43196 834 aa24.85■■□□□ 1.57
COLCA2-201ENST00000398035 SSFA2P28290 1259 aa24.85■■□□□ 1.57
COLCA2-201ENST00000398035 PPP1R1BQ9UD71 204 aaPredicted RBP24.85■■□□□ 1.57
COLCA2-201ENST00000398035 BTBD11A6QL63 1104 aa24.84■■□□□ 1.57
COLCA2-201ENST00000398035 SLC39A6Q13433 755 aa24.84■■□□□ 1.57
COLCA2-201ENST00000398035 ZNF790Q6PG37 636 aa24.84■■□□□ 1.57
COLCA2-201ENST00000398035 ATF5Q9Y2D1 282 aaPredicted RBP24.84■■□□□ 1.57
COLCA2-201ENST00000398035 MRC1P22897 1456 aa24.83■■□□□ 1.57
COLCA2-201ENST00000398035 COL23A1Q86Y22 540 aaPredicted RBP24.83■■□□□ 1.57
COLCA2-201ENST00000398035 ADAMTS8Q9UP79 889 aa24.83■■□□□ 1.57
COLCA2-201ENST00000398035 GNPATO15228 680 aa24.82■■□□□ 1.56
COLCA2-201ENST00000398035 MCM10Q7L590 875 aa24.82■■□□□ 1.56
COLCA2-201ENST00000398035 TEX13AQ9BXU3 409 aaPredicted RBP24.82■■□□□ 1.56
COLCA2-201ENST00000398035 RTCBQ9Y3I0 505 aaKnown RBP24.82■■□□□ 1.56
COLCA2-201ENST00000398035 CNTNAP4Q9C0A0 1308 aa24.81■■□□□ 1.56
COLCA2-201ENST00000398035 TAF7Q15545 349 aaPredicted RBP24.81■■□□□ 1.56
COLCA2-201ENST00000398035 RUNDC1Q96C34 613 aa24.81■■□□□ 1.56
COLCA2-201ENST00000398035 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.8■■□□□ 1.56
COLCA2-201ENST00000398035 LMOD3Q0VAK6 560 aa24.8■■□□□ 1.56
COLCA2-201ENST00000398035 PNISRQ8TF01 805 aaKnown RBP24.8■■□□□ 1.56
COLCA2-201ENST00000398035 ADRA2BP18089 450 aa24.79■■□□□ 1.56
COLCA2-201ENST00000398035 POLD1P28340 1107 aa24.79■■□□□ 1.56
COLCA2-201ENST00000398035 PTGER2P43116 358 aa24.79■■□□□ 1.56
COLCA2-201ENST00000398035 RIPK4P57078 832 aa24.79■■□□□ 1.56
COLCA2-201ENST00000398035 TRAPPC3LQ5T215 181 aa24.79■■□□□ 1.56
COLCA2-201ENST00000398035 RPS6KA4O75676 772 aa24.78■■□□□ 1.56
COLCA2-201ENST00000398035 FMNL2Q96PY5 1086 aa24.78■■□□□ 1.56
COLCA2-201ENST00000398035 LRP5O75197 1615 aa24.78■■□□□ 1.56
COLCA2-201ENST00000398035 STARD3NLO95772 234 aa24.78■■□□□ 1.56
COLCA2-201ENST00000398035 DCTN1Q14203 1278 aa24.78■■□□□ 1.56
COLCA2-201ENST00000398035 ADAMTS7Q9UKP4 1686 aa24.77■■□□□ 1.56
COLCA2-201ENST00000398035 SCN11AQ9UI33 1791 aa24.77■■□□□ 1.56
COLCA2-201ENST00000398035 PHF14O94880 888 aa24.77■■□□□ 1.56
COLCA2-201ENST00000398035 TMPOP42166 694 aaKnown RBP24.77■■□□□ 1.56
COLCA2-201ENST00000398035 CRKLP46109 303 aaKnown RBP24.77■■□□□ 1.56
COLCA2-201ENST00000398035 SRCAPQ6ZRS2 3230 aa24.76■■□□□ 1.55
COLCA2-201ENST00000398035 SGIP1Q9BQI5 828 aa24.76■■□□□ 1.55
COLCA2-201ENST00000398035 DNAJC10Q8IXB1 793 aa24.75■■□□□ 1.55
COLCA2-201ENST00000398035 ZNF496Q96IT1 587 aaPredicted RBP24.75■■□□□ 1.55
COLCA2-201ENST00000398035 CYP19A1P11511 503 aaPredicted RBP24.74■■□□□ 1.55
COLCA2-201ENST00000398035 CCDC146Q8IYE0 955 aa24.73■■□□□ 1.55
COLCA2-201ENST00000398035 ARXQ96QS3 562 aa24.73■■□□□ 1.55
COLCA2-201ENST00000398035 CCDC87Q9NVE4 849 aa24.73■■□□□ 1.55
COLCA2-201ENST00000398035 C4BP0C0L5 1744 aa24.73■■□□□ 1.55
COLCA2-201ENST00000398035 CASZ1Q86V15 1759 aa24.72■■□□□ 1.55
COLCA2-201ENST00000398035 C5P01031 1676 aa24.72■■□□□ 1.55
COLCA2-201ENST00000398035 ZNF831Q5JPB2 1677 aa24.72■■□□□ 1.55
COLCA2-201ENST00000398035 RFC4P35249 363 aa24.72■■□□□ 1.55
COLCA2-201ENST00000398035 HEG1Q9ULI3 1381 aa24.72■■□□□ 1.55
COLCA2-201ENST00000398035 INTS5Q6P9B9 1019 aaKnown RBP24.71■■□□□ 1.55
COLCA2-201ENST00000398035 AMIGO3Q86WK7 504 aa24.71■■□□□ 1.55
COLCA2-201ENST00000398035 ARHGEF1Q92888 912 aaKnown RBP24.71■■□□□ 1.55
COLCA2-201ENST00000398035 BABAM1Q9NWV8 329 aa24.71■■□□□ 1.55
COLCA2-201ENST00000398035 MRS2Q9HD23 443 aa24.7■■□□□ 1.55
COLCA2-201ENST00000398035 SNRPA1P09661 255 aaKnown RBP24.69■■□□□ 1.54
COLCA2-201ENST00000398035 NLGN1Q8N2Q7 840 aa24.69■■□□□ 1.54
COLCA2-201ENST00000398035 NEUROD2Q15784 382 aa24.69■■□□□ 1.54
COLCA2-201ENST00000398035 KCPQ6ZWJ8 1503 aa24.68■■□□□ 1.54
COLCA2-201ENST00000398035 KCNQ3O43525 872 aa24.68■■□□□ 1.54
COLCA2-201ENST00000398035 SMIM5Q71RC9 77 aa24.67■■□□□ 1.54
COLCA2-201ENST00000398035 QSER1Q2KHR3 1735 aa24.66■■□□□ 1.54
COLCA2-201ENST00000398035 CCDC184Q52MB2 194 aa24.66■■□□□ 1.54
COLCA2-201ENST00000398035 NPM2Q86SE8 214 aaKnown RBP24.66■■□□□ 1.54
COLCA2-201ENST00000398035 RRP7AQ9Y3A4 280 aaKnown RBP24.66■■□□□ 1.54
COLCA2-201ENST00000398035 MSL1Q68DK7 614 aa24.65■■□□□ 1.54
COLCA2-201ENST00000398035 THUMPD2Q9BTF0 503 aaKnown RBP24.65■■□□□ 1.54
COLCA2-201ENST00000398035 MIS18AQ9NYP9 233 aa24.65■■□□□ 1.54
COLCA2-201ENST00000398035 A0A087WZG4 1122 aa24.64■■□□□ 1.54
COLCA2-201ENST00000398035 TAF1LQ8IZX4 1826 aa24.64■■□□□ 1.54
COLCA2-201ENST00000398035 DCAF8L1A6NGE4 600 aa24.63■■□□□ 1.53
COLCA2-201ENST00000398035 ZPR1O75312 459 aa24.63■■□□□ 1.53
COLCA2-201ENST00000398035 SYT17Q9BSW7 474 aa24.63■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms