RNA–Protein interactions for RNA: ENST00000397442.5

CPNE1-203, Transcript of copine 1, humanhuman

TSL 5 BASIC

Gene CPNE1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-203ENST00000397442 NEFLP07196 543 aa35.49■■■■□ 3.27
CPNE1-203ENST00000397442 TWISTNBQ3B726 338 aaPredicted RBP35.49■■■■□ 3.27
CPNE1-203ENST00000397442 FBXO41Q8TF61 875 aa35.48■■■■□ 3.27
CPNE1-203ENST00000397442 BTBD11A6QL63 1104 aa35.47■■■■□ 3.27
CPNE1-203ENST00000397442 IRX6P78412 446 aaPredicted RBP35.47■■■■□ 3.27
CPNE1-203ENST00000397442 PLIN1O60240 522 aa35.46■■■■□ 3.27
CPNE1-203ENST00000397442 FKBP8Q14318 412 aa35.46■■■■□ 3.27
CPNE1-203ENST00000397442 ZNF428Q96B54 188 aa35.46■■■■□ 3.27
CPNE1-203ENST00000397442 TOGARAM1Q9Y4F4 1720 aa35.46■■■■□ 3.27
CPNE1-203ENST00000397442 NFATC2IPQ8NCF5 419 aa35.45■■■■□ 3.27
CPNE1-203ENST00000397442 SSH1Q8WYL5 1049 aa35.44■■■■□ 3.26
CPNE1-203ENST00000397442 BCL2L13Q9BXK5 485 aa35.44■■■■□ 3.26
CPNE1-203ENST00000397442 GLI3P10071 1580 aa35.44■■■■□ 3.26
CPNE1-203ENST00000397442 ATRNO75882 1429 aa35.44■■■■□ 3.26
CPNE1-203ENST00000397442 KCNQ3O43525 872 aa35.43■■■■□ 3.26
CPNE1-203ENST00000397442 DDB1Q16531 1140 aa35.43■■■■□ 3.26
CPNE1-203ENST00000397442 FAM98CQ17RN3 349 aaKnown RBP35.43■■■■□ 3.26
CPNE1-203ENST00000397442 ERVV-2B6SEH9 535 aa35.42■■■■□ 3.26
CPNE1-203ENST00000397442 EIF4A1P60842 406 aaKnown RBP35.41■■■■□ 3.26
CPNE1-203ENST00000397442 ALDH1L2Q3SY69 923 aa35.41■■■■□ 3.26
CPNE1-203ENST00000397442 CABP4P57796 275 aa35.4■■■■□ 3.26
CPNE1-203ENST00000397442 THSD7AQ9UPZ6 1657 aa35.39■■■■□ 3.26
CPNE1-203ENST00000397442 GJD4Q96KN9 370 aaPredicted RBP35.39■■■■□ 3.26
CPNE1-203ENST00000397442 SMC4Q9NTJ3 1288 aa35.38■■■■□ 3.25
CPNE1-203ENST00000397442 TRPC5Q9UL62 973 aaPredicted RBP35.37■■■■□ 3.25
CPNE1-203ENST00000397442 GOLGA6L2Q8N9W4 650 aaPredicted RBP35.36■■■■□ 3.25
CPNE1-203ENST00000397442 HEG1Q9ULI3 1381 aa35.36■■■■□ 3.25
CPNE1-203ENST00000397442 ZNF790Q6PG37 636 aa35.35■■■■□ 3.25
CPNE1-203ENST00000397442 BRPF1P55201 1214 aaPredicted RBP35.34■■■■□ 3.25
CPNE1-203ENST00000397442 SLC39A6Q13433 755 aa35.34■■■■□ 3.25
CPNE1-203ENST00000397442 MARCH10Q8NA82 808 aaPredicted RBP35.34■■■■□ 3.25
CPNE1-203ENST00000397442 SOS1Q07889 1333 aaPredicted RBP35.34■■■■□ 3.25
CPNE1-203ENST00000397442 C20orf194Q5TEA3 1177 aa35.33■■■■□ 3.25
CPNE1-203ENST00000397442 ITGB4P16144 1822 aa35.32■■■■□ 3.24
CPNE1-203ENST00000397442 MRPL50Q8N5N7 158 aaKnown RBP35.32■■■■□ 3.24
CPNE1-203ENST00000397442 PAPPAQ13219 1627 aa35.31■■■■□ 3.24
CPNE1-203ENST00000397442 TCERG1O14776 1098 aaKnown RBP35.3■■■■□ 3.24
CPNE1-203ENST00000397442 FRAT1Q92837 279 aaPredicted RBP35.3■■■■□ 3.24
CPNE1-203ENST00000397442 QTRT2Q9H974 415 aaKnown RBP35.3■■■■□ 3.24
CPNE1-203ENST00000397442 ONECUT3O60422 494 aaPredicted RBP35.29■■■■□ 3.24
CPNE1-203ENST00000397442 DOT1LQ8TEK3 1739 aa35.28■■■■□ 3.24
CPNE1-203ENST00000397442 HOXB7P09629 217 aa35.27■■■■□ 3.24
CPNE1-203ENST00000397442 UBR2Q8IWV8 1755 aa35.26■■■■□ 3.24
CPNE1-203ENST00000397442 KIF16BQ96L93 1317 aa35.26■■■■□ 3.24
CPNE1-203ENST00000397442 GIGYF1O75420 1035 aaPredicted RBP35.26■■■■□ 3.23
CPNE1-203ENST00000397442 TMOD3Q9NYL9 352 aa35.26■■■■□ 3.23
CPNE1-203ENST00000397442 NOB1Q9ULX3 412 aaKnown RBP35.25■■■■□ 3.23
CPNE1-203ENST00000397442 ZNF496Q96IT1 587 aaPredicted RBP35.24■■■■□ 3.23
CPNE1-203ENST00000397442 CANXP27824 592 aaKnown RBP35.24■■■■□ 3.23
CPNE1-203ENST00000397442 ERICH6BQ5W0A0 696 aa35.24■■■■□ 3.23
CPNE1-203ENST00000397442 ZKSCAN2Q63HK3 967 aa35.24■■■■□ 3.23
CPNE1-203ENST00000397442 PIGBQ92521 554 aa35.24■■■■□ 3.23
CPNE1-203ENST00000397442 TNNQ9UQP3 1299 aa35.24■■■■□ 3.23
CPNE1-203ENST00000397442 BCL9O00512 1426 aa35.23■■■■□ 3.23
CPNE1-203ENST00000397442 PDE3AQ14432 1141 aa35.23■■■■□ 3.23
CPNE1-203ENST00000397442 TTC5Q8N0Z6 440 aa35.23■■■■□ 3.23
CPNE1-203ENST00000397442 A0A0G2JS52 829 aa35.22■■■■□ 3.23
CPNE1-203ENST00000397442 MYT1Q01538 1121 aa35.22■■■■□ 3.23
CPNE1-203ENST00000397442 C5P01031 1676 aa35.22■■■■□ 3.23
CPNE1-203ENST00000397442 KCPQ6ZWJ8 1503 aa35.21■■■■□ 3.23
CPNE1-203ENST00000397442 CCDC30Q5VVM6 783 aa35.21■■■■□ 3.23
CPNE1-203ENST00000397442 PRAMEF22A3QJZ6 481 aa35.2■■■■□ 3.23
CPNE1-203ENST00000397442 TRIM27P14373 513 aa35.2■■■■□ 3.23
CPNE1-203ENST00000397442 HDGFL1Q5TGJ6 251 aa35.2■■■■□ 3.23
CPNE1-203ENST00000397442 KAT6BQ8WYB5 2073 aa35.19■■■■□ 3.22
CPNE1-203ENST00000397442 PRIM1P49642 420 aaKnown RBP35.18■■■■□ 3.22
CPNE1-203ENST00000397442 ZNF772Q68DY9 489 aaPredicted RBP35.18■■■■□ 3.22
CPNE1-203ENST00000397442 ATF7IPQ6VMQ6 1270 aa35.18■■■■□ 3.22
CPNE1-203ENST00000397442 NECTIN2Q92692 538 aa35.18■■■■□ 3.22
CPNE1-203ENST00000397442 FMNL2Q96PY5 1086 aa35.18■■■■□ 3.22
CPNE1-203ENST00000397442 CRBNQ96SW2 442 aa35.18■■■■□ 3.22
CPNE1-203ENST00000397442 SLC4A2P04920 1241 aa35.17■■■■□ 3.22
CPNE1-203ENST00000397442 RLBP1P12271 317 aa35.17■■■■□ 3.22
CPNE1-203ENST00000397442 EXOC6Q8TAG9 804 aa35.17■■■■□ 3.22
CPNE1-203ENST00000397442 CACNA1FO60840 1977 aa35.17■■■■□ 3.22
CPNE1-203ENST00000397442 IPO8O15397 1037 aaKnown RBP35.17■■■■□ 3.22
CPNE1-203ENST00000397442 PANK1Q8TE04 598 aa35.17■■■■□ 3.22
CPNE1-203ENST00000397442 ARHGAP45Q92619 1136 aa35.17■■■■□ 3.22
CPNE1-203ENST00000397442 SEPT12Q8IYM1 358 aa35.16■■■■□ 3.22
CPNE1-203ENST00000397442 EIF2S2P20042 333 aaKnown RBP35.15■■■■□ 3.22
CPNE1-203ENST00000397442 ASAP1Q9ULH1 1129 aa35.15■■■■□ 3.22
CPNE1-203ENST00000397442 CLUAP1Q96AJ1 413 aa35.14■■■■□ 3.22
CPNE1-203ENST00000397442 STK31Q9BXU1 1019 aa35.14■■■■□ 3.22
CPNE1-203ENST00000397442 ATG3Q9NT62 314 aa35.14■■■■□ 3.22
CPNE1-203ENST00000397442 SYTL4Q96C24 671 aaPredicted RBP35.14■■■■□ 3.22
CPNE1-203ENST00000397442 SNRPA1P09661 255 aaKnown RBP35.13■■■■□ 3.21
CPNE1-203ENST00000397442 ACSBG1Q96GR2 724 aa35.13■■■■□ 3.21
CPNE1-203ENST00000397442 G2E3Q7L622 706 aa35.12■■■■□ 3.21
CPNE1-203ENST00000397442 CHMP4AQ9BY43 222 aa35.12■■■■□ 3.21
CPNE1-203ENST00000397442 DZIP1LQ8IYY4 767 aaKnown RBP35.11■■■■□ 3.21
CPNE1-203ENST00000397442 LAMB4A4D0S4 1761 aa35.1■■■■□ 3.21
CPNE1-203ENST00000397442 RGS12O14924 1447 aa35.1■■■■□ 3.21
CPNE1-203ENST00000397442 MS4A1P11836 297 aa35.09■■■■□ 3.21
CPNE1-203ENST00000397442 CHPF2Q9P2E5 772 aa35.09■■■■□ 3.21
CPNE1-203ENST00000397442 PTCD1O75127 700 aaKnown RBP35.08■■■■□ 3.21
CPNE1-203ENST00000397442 PTPRCP08575 1304 aa35.08■■■■□ 3.21
CPNE1-203ENST00000397442 RBM6P78332 1123 aaKnown RBP35.08■■■■□ 3.21
CPNE1-203ENST00000397442 COG6Q9Y2V7 657 aa35.08■■■■□ 3.21
CPNE1-203ENST00000397442 USP16Q9Y5T5 823 aa35.08■■■■□ 3.21
CPNE1-203ENST00000397442 FTSJ3Q8IY81 847 aaKnown RBP35.07■■■■□ 3.2
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms