RNA–Protein interactions for RNA: ENST00000397408.5

TSPAN4-206, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-206ENST00000397408 ATG3Q9NT62 314 aa28.08■■■□□ 2.09
TSPAN4-206ENST00000397408 IL17REQ8NFR9 667 aa28.07■■■□□ 2.08
TSPAN4-206ENST00000397408 MRS2Q9HD23 443 aa28.07■■■□□ 2.08
TSPAN4-206ENST00000397408 PSDA5PKW4 1024 aaPredicted RBP28.06■■■□□ 2.08
TSPAN4-206ENST00000397408 CCDC146Q8IYE0 955 aa28.06■■■□□ 2.08
TSPAN4-206ENST00000397408 R3HDM1Q15032 1099 aaKnown RBP28.05■■■□□ 2.08
TSPAN4-206ENST00000397408 NFE2L2Q16236 605 aa28.05■■■□□ 2.08
TSPAN4-206ENST00000397408 RTF1Q92541 710 aaKnown RBP28.05■■■□□ 2.08
TSPAN4-206ENST00000397408 DLG5Q8TDM6 1919 aa28.04■■■□□ 2.08
TSPAN4-206ENST00000397408 CEMIPQ8WUJ3 1361 aa28.03■■■□□ 2.08
TSPAN4-206ENST00000397408 TEFQ10587 303 aa28.03■■■□□ 2.08
TSPAN4-206ENST00000397408 MCM10Q7L590 875 aa28.02■■■□□ 2.08
TSPAN4-206ENST00000397408 STK32BQ9NY57 414 aa28.02■■■□□ 2.08
TSPAN4-206ENST00000397408 LOC102724428A0A0B4J2F2 783 aa28.01■■■□□ 2.08
TSPAN4-206ENST00000397408 SIK1P57059 783 aa28.01■■■□□ 2.08
TSPAN4-206ENST00000397408 RUNDC1Q96C34 613 aa28.01■■■□□ 2.08
TSPAN4-206ENST00000397408 HTATSF1O43719 755 aaKnown RBP28.01■■■□□ 2.07
TSPAN4-206ENST00000397408 DCTN1Q14203 1278 aa28.01■■■□□ 2.07
TSPAN4-206ENST00000397408 C5P01031 1676 aa28■■■□□ 2.07
TSPAN4-206ENST00000397408 SIPA1L3O60292 1781 aaPredicted RBP28■■■□□ 2.07
TSPAN4-206ENST00000397408 RBM42Q9BTD8 480 aaKnown RBP27.99■■■□□ 2.07
TSPAN4-206ENST00000397408 TAF1LQ8IZX4 1826 aa27.98■■■□□ 2.07
TSPAN4-206ENST00000397408 SLC15A2Q16348 729 aa27.98■■■□□ 2.07
TSPAN4-206ENST00000397408 ZNF827Q17R98 1081 aa27.98■■■□□ 2.07
TSPAN4-206ENST00000397408 TMPOP42166 694 aaKnown RBP27.97■■■□□ 2.07
TSPAN4-206ENST00000397408 SLC39A6Q13433 755 aa27.97■■■□□ 2.07
TSPAN4-206ENST00000397408 PNISRQ8TF01 805 aaKnown RBP27.97■■■□□ 2.07
TSPAN4-206ENST00000397408 PTCD1O75127 700 aaKnown RBP27.96■■■□□ 2.07
TSPAN4-206ENST00000397408 ATP6V1AP38606 617 aa27.96■■■□□ 2.07
TSPAN4-206ENST00000397408 RRP7AQ9Y3A4 280 aaKnown RBP27.96■■■□□ 2.07
TSPAN4-206ENST00000397408 RIPK4P57078 832 aa27.95■■■□□ 2.07
TSPAN4-206ENST00000397408 AKT1S1Q96B36 256 aa27.95■■■□□ 2.07
TSPAN4-206ENST00000397408 ITPK1Q13572 414 aa27.94■■■□□ 2.06
TSPAN4-206ENST00000397408 SLC4A9Q96Q91 983 aa27.94■■■□□ 2.06
TSPAN4-206ENST00000397408 ZNF831Q5JPB2 1677 aa27.94■■■□□ 2.06
TSPAN4-206ENST00000397408 KCPQ6ZWJ8 1503 aa27.93■■■□□ 2.06
TSPAN4-206ENST00000397408 C4BP0C0L5 1744 aa27.93■■■□□ 2.06
TSPAN4-206ENST00000397408 NEUROD2Q15784 382 aa27.92■■■□□ 2.06
TSPAN4-206ENST00000397408 THUMPD2Q9BTF0 503 aaKnown RBP27.92■■■□□ 2.06
TSPAN4-206ENST00000397408 HMGB2P26583 209 aaKnown RBP27.92■■■□□ 2.06
TSPAN4-206ENST00000397408 DIEXFQ68CQ4 756 aaKnown RBP27.92■■■□□ 2.06
TSPAN4-206ENST00000397408 TTC5Q8N0Z6 440 aa27.92■■■□□ 2.06
TSPAN4-206ENST00000397408 LINC00116Q8NCU8 138 aa27.92■■■□□ 2.06
TSPAN4-206ENST00000397408 UBR2Q8IWV8 1755 aa27.91■■■□□ 2.06
TSPAN4-206ENST00000397408 LMOD3Q0VAK6 560 aa27.91■■■□□ 2.06
TSPAN4-206ENST00000397408 TUBGCP6Q96RT7 1819 aa27.9■■■□□ 2.06
TSPAN4-206ENST00000397408 BTBD11A6QL63 1104 aa27.9■■■□□ 2.06
TSPAN4-206ENST00000397408 ZNF790Q6PG37 636 aa27.89■■■□□ 2.06
TSPAN4-206ENST00000397408 TFCP2L1Q9NZI6 479 aa27.89■■■□□ 2.06
TSPAN4-206ENST00000397408 TJP1Q07157 1748 aa27.88■■■□□ 2.05
TSPAN4-206ENST00000397408 CASZ1Q86V15 1759 aa27.88■■■□□ 2.05
TSPAN4-206ENST00000397408 CICQ96RK0 1608 aaPredicted RBP27.88■■■□□ 2.05
TSPAN4-206ENST00000397408 COL5A3P25940 1745 aaPredicted RBP27.87■■■□□ 2.05
TSPAN4-206ENST00000397408 QSER1Q2KHR3 1735 aa27.87■■■□□ 2.05
TSPAN4-206ENST00000397408 APAF1O14727 1248 aa27.87■■■□□ 2.05
TSPAN4-206ENST00000397408 AK7Q96M32 723 aa27.87■■■□□ 2.05
TSPAN4-206ENST00000397408 PDGFDQ9GZP0 370 aaPredicted RBP27.86■■■□□ 2.05
TSPAN4-206ENST00000397408 TAF7Q15545 349 aaPredicted RBP27.85■■■□□ 2.05
TSPAN4-206ENST00000397408 KCNQ3O43525 872 aa27.84■■■□□ 2.05
TSPAN4-206ENST00000397408 ZNF496Q96IT1 587 aaPredicted RBP27.84■■■□□ 2.05
TSPAN4-206ENST00000397408 PNPLA7Q6ZV29 1317 aa27.84■■■□□ 2.05
TSPAN4-206ENST00000397408 FAM9BQ8IZU0 186 aa27.84■■■□□ 2.05
TSPAN4-206ENST00000397408 TRIM35Q9UPQ4 493 aa27.84■■■□□ 2.05
TSPAN4-206ENST00000397408 DNAJC10Q8IXB1 793 aa27.83■■■□□ 2.05
TSPAN4-206ENST00000397408 CNTNAP4Q9C0A0 1308 aa27.82■■■□□ 2.04
TSPAN4-206ENST00000397408 FMNL2Q96PY5 1086 aa27.82■■■□□ 2.04
TSPAN4-206ENST00000397408 MIS18AQ9NYP9 233 aa27.82■■■□□ 2.04
TSPAN4-206ENST00000397408 UBR3Q6ZT12 1888 aa27.82■■■□□ 2.04
TSPAN4-206ENST00000397408 HEG1Q9ULI3 1381 aa27.81■■■□□ 2.04
TSPAN4-206ENST00000397408 GNPATO15228 680 aa27.81■■■□□ 2.04
TSPAN4-206ENST00000397408 VSIG10Q8N0Z9 540 aa27.81■■■□□ 2.04
TSPAN4-206ENST00000397408 KDM3BQ7LBC6 1761 aa27.8■■■□□ 2.04
TSPAN4-206ENST00000397408 CCER2I3L3R5 266 aa27.79■■■□□ 2.04
TSPAN4-206ENST00000397408 AMIGO3Q86WK7 504 aa27.79■■■□□ 2.04
TSPAN4-206ENST00000397408 SRCAPQ6ZRS2 3230 aa27.79■■■□□ 2.04
TSPAN4-206ENST00000397408 MYH14Q7Z406 1995 aaKnown RBP27.78■■■□□ 2.04
TSPAN4-206ENST00000397408 SENP3-EIF4A1A0A087X0R7 540 aa27.78■■■□□ 2.04
TSPAN4-206ENST00000397408 PHF14O94880 888 aa27.78■■■□□ 2.04
TSPAN4-206ENST00000397408 CRKLP46109 303 aaKnown RBP27.78■■■□□ 2.04
TSPAN4-206ENST00000397408 ZBTB7AO95365 584 aa27.77■■■□□ 2.04
TSPAN4-206ENST00000397408 RC3H1Q5TC82 1133 aaKnown RBP27.77■■■□□ 2.04
TSPAN4-206ENST00000397408 SMIM5Q71RC9 77 aa27.77■■■□□ 2.04
TSPAN4-206ENST00000397408 MSH5O43196 834 aa27.76■■■□□ 2.04
TSPAN4-206ENST00000397408 COL23A1Q86Y22 540 aaPredicted RBP27.76■■■□□ 2.04
TSPAN4-206ENST00000397408 LRP5O75197 1615 aa27.76■■■□□ 2.03
TSPAN4-206ENST00000397408 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.75■■■□□ 2.03
TSPAN4-206ENST00000397408 FLAD1Q8NFF5 587 aa27.75■■■□□ 2.03
TSPAN4-206ENST00000397408 TSPYL4Q9UJ04 414 aa27.75■■■□□ 2.03
TSPAN4-206ENST00000397408 CYP19A1P11511 503 aaPredicted RBP27.75■■■□□ 2.03
TSPAN4-206ENST00000397408 SSFA2P28290 1259 aa27.75■■■□□ 2.03
TSPAN4-206ENST00000397408 RTCBQ9Y3I0 505 aaKnown RBP27.75■■■□□ 2.03
TSPAN4-206ENST00000397408 MIER1Q8N108 512 aa27.74■■■□□ 2.03
TSPAN4-206ENST00000397408 SPON1Q9HCB6 807 aa27.73■■■□□ 2.03
TSPAN4-206ENST00000397408 CCDC87Q9NVE4 849 aa27.73■■■□□ 2.03
TSPAN4-206ENST00000397408 INTS5Q6P9B9 1019 aaKnown RBP27.72■■■□□ 2.03
TSPAN4-206ENST00000397408 TEX13AQ9BXU3 409 aaPredicted RBP27.72■■■□□ 2.03
TSPAN4-206ENST00000397408 MTFR1LQ9H019 292 aa27.72■■■□□ 2.03
TSPAN4-206ENST00000397408 RPS6KA4O75676 772 aa27.71■■■□□ 2.03
TSPAN4-206ENST00000397408 STARD3NLO95772 234 aa27.71■■■□□ 2.03
TSPAN4-206ENST00000397408 SLC16A10Q8TF71 515 aa27.71■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms