RNA–Protein interactions for RNA: ENST00000396340.1

CDKN1B-202, Transcript of cyclin dependent kinase inhibitor 1B, humanhuman

TSL 3 BASIC

Gene CDKN1B, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1B-202ENST00000396340 ATP6V1AP38606 617 aa25.78■■□□□ 1.72
CDKN1B-202ENST00000396340 ASAP1Q9ULH1 1129 aa25.78■■□□□ 1.72
CDKN1B-202ENST00000396340 TUBGCP6Q96RT7 1819 aa25.78■■□□□ 1.72
CDKN1B-202ENST00000396340 U2AF1L5P0DN76 240 aaPredicted RBP25.77■■□□□ 1.72
CDKN1B-202ENST00000396340 POLD1P28340 1107 aa25.77■■□□□ 1.72
CDKN1B-202ENST00000396340 U2AF1Q01081 240 aaKnown RBP eCLIP25.77■■□□□ 1.72
CDKN1B-202ENST00000396340 NFATC2IPQ8NCF5 419 aa25.77■■□□□ 1.72
CDKN1B-202ENST00000396340 GNAT3A8MTJ3 354 aa25.76■■□□□ 1.71
CDKN1B-202ENST00000396340 ZBTB7AO95365 584 aa25.76■■□□□ 1.71
CDKN1B-202ENST00000396340 MTHFSDQ2M296 383 aaKnown RBP25.76■■□□□ 1.71
CDKN1B-202ENST00000396340 SLC52A2Q9HAB3 445 aa25.76■■□□□ 1.71
CDKN1B-202ENST00000396340 PNPLA7Q6ZV29 1317 aa25.76■■□□□ 1.71
CDKN1B-202ENST00000396340 ADAMTS7Q9UKP4 1686 aa25.76■■□□□ 1.71
CDKN1B-202ENST00000396340 DDX10Q13206 875 aaKnown RBP25.75■■□□□ 1.71
CDKN1B-202ENST00000396340 COL24A1Q17RW2 1714 aa25.74■■□□□ 1.71
CDKN1B-202ENST00000396340 MRC1P22897 1456 aa25.74■■□□□ 1.71
CDKN1B-202ENST00000396340 MAP3K5Q99683 1374 aa25.74■■□□□ 1.71
CDKN1B-202ENST00000396340 SSFA2P28290 1259 aa25.74■■□□□ 1.71
CDKN1B-202ENST00000396340 UBR3Q6ZT12 1888 aa25.73■■□□□ 1.71
CDKN1B-202ENST00000396340 RNMTO43148 476 aaKnown RBP25.73■■□□□ 1.71
CDKN1B-202ENST00000396340 KCNQ4P56696 695 aa25.73■■□□□ 1.71
CDKN1B-202ENST00000396340 RC3H1Q5TC82 1133 aaKnown RBP25.72■■□□□ 1.71
CDKN1B-202ENST00000396340 RBM42Q9BTD8 480 aaKnown RBP25.72■■□□□ 1.71
CDKN1B-202ENST00000396340 RSPH6AQ9H0K4 717 aa25.72■■□□□ 1.71
CDKN1B-202ENST00000396340 CICQ96RK0 1608 aaPredicted RBP25.72■■□□□ 1.71
CDKN1B-202ENST00000396340 MSH5O43196 834 aa25.71■■□□□ 1.71
CDKN1B-202ENST00000396340 PRKAR2BP31323 418 aa25.71■■□□□ 1.71
CDKN1B-202ENST00000396340 PTGER2P43116 358 aa25.71■■□□□ 1.71
CDKN1B-202ENST00000396340 TEFQ10587 303 aa25.71■■□□□ 1.71
CDKN1B-202ENST00000396340 ATF5Q9Y2D1 282 aaPredicted RBP25.71■■□□□ 1.71
CDKN1B-202ENST00000396340 HTATSF1O43719 755 aaKnown RBP25.7■■□□□ 1.7
CDKN1B-202ENST00000396340 ADRA2BP18089 450 aa25.7■■□□□ 1.7
CDKN1B-202ENST00000396340 PDGFDQ9GZP0 370 aaPredicted RBP25.7■■□□□ 1.7
CDKN1B-202ENST00000396340 COL5A3P25940 1745 aaPredicted RBP25.69■■□□□ 1.7
CDKN1B-202ENST00000396340 RTF1Q92541 710 aaKnown RBP25.69■■□□□ 1.7
CDKN1B-202ENST00000396340 MYBBP1AQ9BQG0 1328 aaKnown RBP25.68■■□□□ 1.7
CDKN1B-202ENST00000396340 ARXQ96QS3 562 aa25.68■■□□□ 1.7
CDKN1B-202ENST00000396340 CNTNAP4Q9C0A0 1308 aa25.67■■□□□ 1.7
CDKN1B-202ENST00000396340 VSIG10Q8N0Z9 540 aa25.67■■□□□ 1.7
CDKN1B-202ENST00000396340 SGIP1Q9BQI5 828 aa25.67■■□□□ 1.7
CDKN1B-202ENST00000396340 RTCBQ9Y3I0 505 aaKnown RBP25.67■■□□□ 1.7
CDKN1B-202ENST00000396340 COL23A1Q86Y22 540 aaPredicted RBP25.66■■□□□ 1.7
CDKN1B-202ENST00000396340 TTC5Q8N0Z6 440 aa25.66■■□□□ 1.7
CDKN1B-202ENST00000396340 LGR6Q9HBX8 967 aa25.66■■□□□ 1.7
CDKN1B-202ENST00000396340 GNPATO15228 680 aa25.64■■□□□ 1.7
CDKN1B-202ENST00000396340 PTCD1O75127 700 aaKnown RBP25.64■■□□□ 1.7
CDKN1B-202ENST00000396340 LINC00116Q8NCU8 138 aa25.64■■□□□ 1.7
CDKN1B-202ENST00000396340 TEX13AQ9BXU3 409 aaPredicted RBP25.64■■□□□ 1.7
CDKN1B-202ENST00000396340 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.63■■□□□ 1.69
CDKN1B-202ENST00000396340 ITPK1Q13572 414 aa25.63■■□□□ 1.69
CDKN1B-202ENST00000396340 TRAPPC3LQ5T215 181 aa25.63■■□□□ 1.69
CDKN1B-202ENST00000396340 SIPA1L3O60292 1781 aaPredicted RBP25.62■■□□□ 1.69
CDKN1B-202ENST00000396340 CEMIPQ8WUJ3 1361 aa25.62■■□□□ 1.69
CDKN1B-202ENST00000396340 MAPK8IP3Q9UPT6 1336 aa25.62■■□□□ 1.69
CDKN1B-202ENST00000396340 UBR2Q8IWV8 1755 aa25.61■■□□□ 1.69
CDKN1B-202ENST00000396340 RPS6KA4O75676 772 aa25.6■■□□□ 1.69
CDKN1B-202ENST00000396340 PHACTR3Q96KR7 559 aa25.6■■□□□ 1.69
CDKN1B-202ENST00000396340 IL17REQ8NFR9 667 aa25.58■■□□□ 1.69
CDKN1B-202ENST00000396340 PHF14O94880 888 aa25.57■■□□□ 1.68
CDKN1B-202ENST00000396340 STARD3NLO95772 234 aa25.57■■□□□ 1.68
CDKN1B-202ENST00000396340 RFC4P35249 363 aa25.57■■□□□ 1.68
CDKN1B-202ENST00000396340 ZNF790Q6PG37 636 aa25.57■■□□□ 1.68
CDKN1B-202ENST00000396340 NLGN1Q8N2Q7 840 aa25.57■■□□□ 1.68
CDKN1B-202ENST00000396340 SYT17Q9BSW7 474 aa25.57■■□□□ 1.68
CDKN1B-202ENST00000396340 FHDC1Q9C0D6 1143 aaPredicted RBP25.57■■□□□ 1.68
CDKN1B-202ENST00000396340 TJP1Q07157 1748 aa25.57■■□□□ 1.68
CDKN1B-202ENST00000396340 MYH14Q7Z406 1995 aaKnown RBP25.56■■□□□ 1.68
CDKN1B-202ENST00000396340 SLC4A9Q96Q91 983 aa25.56■■□□□ 1.68
CDKN1B-202ENST00000396340 DLG5Q8TDM6 1919 aa25.55■■□□□ 1.68
CDKN1B-202ENST00000396340 CRKLP46109 303 aaKnown RBP25.55■■□□□ 1.68
CDKN1B-202ENST00000396340 PRKRIP1Q9H875 184 aaPredicted RBP25.55■■□□□ 1.68
CDKN1B-202ENST00000396340 ZNF316A6NFI3 1004 aaPredicted RBP25.54■■□□□ 1.68
CDKN1B-202ENST00000396340 BTBD11A6QL63 1104 aa25.54■■□□□ 1.68
CDKN1B-202ENST00000396340 WDR43Q15061 677 aaKnown RBP eCLIP25.54■■□□□ 1.68
CDKN1B-202ENST00000396340 PNISRQ8TF01 805 aaKnown RBP25.54■■□□□ 1.68
CDKN1B-202ENST00000396340 FMNL2Q96PY5 1086 aa25.54■■□□□ 1.68
CDKN1B-202ENST00000396340 KCPQ6ZWJ8 1503 aa25.53■■□□□ 1.68
CDKN1B-202ENST00000396340 LMOD3Q0VAK6 560 aa25.53■■□□□ 1.68
CDKN1B-202ENST00000396340 CCDC87Q9NVE4 849 aa25.53■■□□□ 1.68
CDKN1B-202ENST00000396340 SLC39A6Q13433 755 aa25.52■■□□□ 1.68
CDKN1B-202ENST00000396340 PLEKHF1Q96S99 279 aa25.52■■□□□ 1.68
CDKN1B-202ENST00000396340 CD2APQ9Y5K6 639 aa25.52■■□□□ 1.68
CDKN1B-202ENST00000396340 NFE2L2Q16236 605 aa25.51■■□□□ 1.67
CDKN1B-202ENST00000396340 NPM2Q86SE8 214 aaKnown RBP25.51■■□□□ 1.67
CDKN1B-202ENST00000396340 HEG1Q9ULI3 1381 aa25.49■■□□□ 1.67
CDKN1B-202ENST00000396340 TAF7Q15545 349 aaPredicted RBP25.49■■□□□ 1.67
CDKN1B-202ENST00000396340 ARHGEF1Q92888 912 aaKnown RBP25.49■■□□□ 1.67
CDKN1B-202ENST00000396340 CYP19A1P11511 503 aaPredicted RBP25.48■■□□□ 1.67
CDKN1B-202ENST00000396340 DNAJC10Q8IXB1 793 aa25.48■■□□□ 1.67
CDKN1B-202ENST00000396340 C4AP0C0L4 1744 aa25.48■■□□□ 1.67
CDKN1B-202ENST00000396340 A0A087WZG4 1122 aa25.47■■□□□ 1.67
CDKN1B-202ENST00000396340 ZPR1O75312 459 aa25.47■■□□□ 1.67
CDKN1B-202ENST00000396340 MSL1Q68DK7 614 aa25.46■■□□□ 1.67
CDKN1B-202ENST00000396340 INTS5Q6P9B9 1019 aaKnown RBP25.45■■□□□ 1.66
CDKN1B-202ENST00000396340 MCM10Q7L590 875 aa25.45■■□□□ 1.66
CDKN1B-202ENST00000396340 ZNF496Q96IT1 587 aaPredicted RBP25.45■■□□□ 1.66
CDKN1B-202ENST00000396340 KLHL34Q8N239 644 aa25.44■■□□□ 1.66
CDKN1B-202ENST00000396340 BABAM1Q9NWV8 329 aa25.44■■□□□ 1.66
CDKN1B-202ENST00000396340 USP42Q9H9J4 1324 aaKnown RBP25.43■■□□□ 1.66
CDKN1B-202ENST00000396340 SNRPA1P09661 255 aaKnown RBP25.43■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms