RNA–Protein interactions for RNA: ENST00000396096.6

NUP50-202, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-202ENST00000396096 FRAT2O75474 233 aaPredicted RBP20.86■□□□□ 0.93
NUP50-202ENST00000396096 GNAI3P08754 354 aa20.86■□□□□ 0.93
NUP50-202ENST00000396096 AMOTQ4VCS5 1084 aa20.86■□□□□ 0.93
NUP50-202ENST00000396096 AKAP4Q5JQC9 854 aa20.86■□□□□ 0.93
NUP50-202ENST00000396096 FKBP5Q13451 457 aaPredicted RBP20.86■□□□□ 0.93
NUP50-202ENST00000396096 PLEKHO1Q53GL0 409 aaPredicted RBP20.86■□□□□ 0.93
NUP50-202ENST00000396096 CHMP4AQ9BY43 222 aa20.86■□□□□ 0.93
NUP50-202ENST00000396096 C19orf44Q9H6X5 657 aa20.86■□□□□ 0.93
NUP50-202ENST00000396096 SLKQ9H2G2 1235 aaPredicted RBP20.85■□□□□ 0.93
NUP50-202ENST00000396096 EIF4A1P60842 406 aaKnown RBP20.84■□□□□ 0.93
NUP50-202ENST00000396096 KRT28Q7Z3Y7 464 aa20.84■□□□□ 0.93
NUP50-202ENST00000396096 NCOA3Q9Y6Q9 1424 aa20.84■□□□□ 0.93
NUP50-202ENST00000396096 LRRC59Q96AG4 307 aaKnown RBP20.84■□□□□ 0.93
NUP50-202ENST00000396096 ADAMTS7Q9UKP4 1686 aa20.83■□□□□ 0.93
NUP50-202ENST00000396096 HDGFL1Q5TGJ6 251 aa20.83■□□□□ 0.92
NUP50-202ENST00000396096 HSCBQ8IWL3 235 aa20.83■□□□□ 0.92
NUP50-202ENST00000396096 C16orf71Q8IYS4 520 aaPredicted RBP20.83■□□□□ 0.92
NUP50-202ENST00000396096 LGR6Q9HBX8 967 aa20.83■□□□□ 0.92
NUP50-202ENST00000396096 DCCP43146 1447 aa20.83■□□□□ 0.92
NUP50-202ENST00000396096 ZNF530Q6P9A1 599 aaPredicted RBP20.82■□□□□ 0.92
NUP50-202ENST00000396096 KIF2CQ99661 725 aa20.82■□□□□ 0.92
NUP50-202ENST00000396096 XPCQ01831 940 aaPredicted RBP20.81■□□□□ 0.92
NUP50-202ENST00000396096 ANKRD24Q8TF21 1146 aa20.81■□□□□ 0.92
NUP50-202ENST00000396096 OSBPL3Q9H4L5 887 aa20.81■□□□□ 0.92
NUP50-202ENST00000396096 SIPA1L3O60292 1781 aaPredicted RBP20.81■□□□□ 0.92
NUP50-202ENST00000396096 ZBTB7CA1YPR0 619 aa20.81■□□□□ 0.92
NUP50-202ENST00000396096 PXDNQ92626 1479 aa20.81■□□□□ 0.92
NUP50-202ENST00000396096 RGPD5Q99666 1765 aa20.8■□□□□ 0.92
NUP50-202ENST00000396096 ATP8B2P98198 1209 aa20.8■□□□□ 0.92
NUP50-202ENST00000396096 GSE1Q14687 1217 aa20.8■□□□□ 0.92
NUP50-202ENST00000396096 OTUD7AQ8TE49 926 aaPredicted RBP20.8■□□□□ 0.92
NUP50-202ENST00000396096 NECTIN2Q92692 538 aa20.8■□□□□ 0.92
NUP50-202ENST00000396096 STRCP1A6NGW2 1772 aa20.79■□□□□ 0.92
NUP50-202ENST00000396096 TUBGCP6Q96RT7 1819 aa20.79■□□□□ 0.92
NUP50-202ENST00000396096 SMARCA5O60264 1052 aaPredicted RBP20.79■□□□□ 0.92
NUP50-202ENST00000396096 RNMTO43148 476 aaKnown RBP20.78■□□□□ 0.92
NUP50-202ENST00000396096 TEFQ10587 303 aa20.78■□□□□ 0.92
NUP50-202ENST00000396096 CHMP5Q9NZZ3 219 aa20.77■□□□□ 0.92
NUP50-202ENST00000396096 ABCC6O95255 1503 aa20.77■□□□□ 0.92
NUP50-202ENST00000396096 C1orf141Q5JVX7 400 aa20.77■□□□□ 0.92
NUP50-202ENST00000396096 USP44Q9H0E7 712 aa20.77■□□□□ 0.92
NUP50-202ENST00000396096 HEG1Q9ULI3 1381 aa20.76■□□□□ 0.91
NUP50-202ENST00000396096 SALL3Q9BXA9 1300 aa20.76■□□□□ 0.91
NUP50-202ENST00000396096 BTBD11A6QL63 1104 aa20.76■□□□□ 0.91
NUP50-202ENST00000396096 SDSP20132 328 aa20.76■□□□□ 0.91
NUP50-202ENST00000396096 PHAXQ9H814 394 aaKnown RBP20.76■□□□□ 0.91
NUP50-202ENST00000396096 AXIN2Q9Y2T1 843 aa20.76■□□□□ 0.91
NUP50-202ENST00000396096 CRYBG1Q9Y4K1 1723 aa20.76■□□□□ 0.91
NUP50-202ENST00000396096 IBTKQ9P2D0 1353 aaPredicted RBP20.76■□□□□ 0.91
NUP50-202ENST00000396096 DDIT3P35638 169 aa20.75■□□□□ 0.91
NUP50-202ENST00000396096 COL18A1P39060 1754 aa20.75■□□□□ 0.91
NUP50-202ENST00000396096 LMOD2Q6P5Q4 547 aa20.75■□□□□ 0.91
NUP50-202ENST00000396096 MPRIPQ6WCQ1 1025 aa20.75■□□□□ 0.91
NUP50-202ENST00000396096 ERBB3P21860 1342 aa20.74■□□□□ 0.91
NUP50-202ENST00000396096 PDE1AP54750 535 aa20.74■□□□□ 0.91
NUP50-202ENST00000396096 LRRFIP2Q9Y608 721 aaKnown RBP20.74■□□□□ 0.91
NUP50-202ENST00000396096 TMEM94Q12767 1356 aa20.74■□□□□ 0.91
NUP50-202ENST00000396096 PLEKHG2Q9H7P9 1386 aa20.74■□□□□ 0.91
NUP50-202ENST00000396096 PNMA6EA0A0J9YXQ4 647 aa20.73■□□□□ 0.91
NUP50-202ENST00000396096 APBB1O00213 710 aa20.73■□□□□ 0.91
NUP50-202ENST00000396096 KCNQ3O43525 872 aa20.73■□□□□ 0.91
NUP50-202ENST00000396096 UBTFL1P0CB47 393 aaPredicted RBP20.73■□□□□ 0.91
NUP50-202ENST00000396096 CASC1Q6TDU7 716 aa20.73■□□□□ 0.91
NUP50-202ENST00000396096 LRRCC1Q9C099 1032 aa20.73■□□□□ 0.91
NUP50-202ENST00000396096 ATF3P18847 181 aa20.73■□□□□ 0.91
NUP50-202ENST00000396096 SRCIN1Q9C0H9 1055 aa20.73■□□□□ 0.91
NUP50-202ENST00000396096 CHPF2Q9P2E5 772 aa20.73■□□□□ 0.91
NUP50-202ENST00000396096 EIF2S2P20042 333 aaKnown RBP20.72■□□□□ 0.91
NUP50-202ENST00000396096 SSH3Q8TE77 659 aa20.72■□□□□ 0.91
NUP50-202ENST00000396096 USP26Q9BXU7 913 aa20.72■□□□□ 0.91
NUP50-202ENST00000396096 EXOC6BQ9Y2D4 811 aa20.72■□□□□ 0.91
NUP50-202ENST00000396096 SCN11AQ9UI33 1791 aa20.71■□□□□ 0.91
NUP50-202ENST00000396096 SPRYD3Q8NCJ5 442 aa20.71■□□□□ 0.91
NUP50-202ENST00000396096 DNAAF4Q8WXU2 420 aa20.71■□□□□ 0.91
NUP50-202ENST00000396096 CIZ1Q9ULV3 898 aaPredicted RBP20.71■□□□□ 0.91
NUP50-202ENST00000396096 BEND3Q5T5X7 828 aa20.7■□□□□ 0.9
NUP50-202ENST00000396096 STAP2Q9UGK3 403 aa20.7■□□□□ 0.9
NUP50-202ENST00000396096 POLA2Q14181 598 aa20.69■□□□□ 0.9
NUP50-202ENST00000396096 DBF4Q9UBU7 674 aaPredicted RBP20.69■□□□□ 0.9
NUP50-202ENST00000396096 ADCY9O60503 1353 aa20.69■□□□□ 0.9
NUP50-202ENST00000396096 GIGYF1O75420 1035 aaPredicted RBP20.69■□□□□ 0.9
NUP50-202ENST00000396096 RABEP1Q15276 862 aa20.69■□□□□ 0.9
NUP50-202ENST00000396096 AOX1Q06278 1338 aa20.68■□□□□ 0.9
NUP50-202ENST00000396096 K7ELQ4 463 aaPredicted RBP20.68■□□□□ 0.9
NUP50-202ENST00000396096 HSP90AB1P08238 724 aaKnown RBP20.68■□□□□ 0.9
NUP50-202ENST00000396096 TNS3Q68CZ2 1445 aa20.67■□□□□ 0.9
NUP50-202ENST00000396096 RAB11FIP3O75154 756 aa20.67■□□□□ 0.9
NUP50-202ENST00000396096 PI4KAP2A4QPH2 592 aa20.67■□□□□ 0.9
NUP50-202ENST00000396096 REC8O95072 547 aa20.67■□□□□ 0.9
NUP50-202ENST00000396096 CD2BP2O95400 341 aaKnown RBP20.67■□□□□ 0.9
NUP50-202ENST00000396096 MX1P20591 662 aa20.67■□□□□ 0.9
NUP50-202ENST00000396096 MCM4P33991 863 aa20.67■□□□□ 0.9
NUP50-202ENST00000396096 CADPS2Q86UW7 1296 aa20.67■□□□□ 0.9
NUP50-202ENST00000396096 PI4KAP1Q8N8J0 262 aa20.67■□□□□ 0.9
NUP50-202ENST00000396096 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.67■□□□□ 0.95e-6■□□□□ 10.1
NUP50-202ENST00000396096 NPHP3Q7Z494 1330 aa20.66■□□□□ 0.9
NUP50-202ENST00000396096 ZC3H6P61129 1189 aaKnown RBP20.66■□□□□ 0.9
NUP50-202ENST00000396096 ERC2O15083 957 aa20.65■□□□□ 0.9
NUP50-202ENST00000396096 PLEKHG5O94827 1062 aa20.65■□□□□ 0.9
NUP50-202ENST00000396096 RBM42Q9BTD8 480 aaKnown RBP20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms