RNA–Protein interactions for RNA: ENST00000396081.5

HERPUD2-202, Transcript of HERPUD family member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERPUD2, Length 3,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-202ENST00000396081 SPDYE4A6NLX3 237 aa21.95■■□□□ 1.11
HERPUD2-202ENST00000396081 SRCIN1Q9C0H9 1055 aa21.95■■□□□ 1.11
HERPUD2-202ENST00000396081 SPC24Q8NBT2 197 aa21.95■■□□□ 1.1
HERPUD2-202ENST00000396081 MX1P20591 662 aa21.95■■□□□ 1.1
HERPUD2-202ENST00000396081 UVSSAQ2YD98 709 aa21.95■■□□□ 1.1
HERPUD2-202ENST00000396081 G2E3Q7L622 706 aa21.95■■□□□ 1.1
HERPUD2-202ENST00000396081 COG3Q96JB2 828 aa21.95■■□□□ 1.1
HERPUD2-202ENST00000396081 CHMLP26374 656 aa21.94■■□□□ 1.1
HERPUD2-202ENST00000396081 NEXMIFQ5QGS0 1516 aa21.94■■□□□ 1.1
HERPUD2-202ENST00000396081 ZSCAN20P17040 1043 aaPredicted RBP21.93■■□□□ 1.1
HERPUD2-202ENST00000396081 LRRCC1Q9C099 1032 aa21.93■■□□□ 1.1
HERPUD2-202ENST00000396081 DMTNQ08495 405 aa21.93■■□□□ 1.1
HERPUD2-202ENST00000396081 GIMAP6Q6P9H5 292 aa21.93■■□□□ 1.1
HERPUD2-202ENST00000396081 PTPRMP28827 1452 aa21.93■■□□□ 1.1
HERPUD2-202ENST00000396081 MAP4K4O95819 1239 aaPredicted RBP21.93■■□□□ 1.1
HERPUD2-202ENST00000396081 OSBPL3Q9H4L5 887 aa21.93■■□□□ 1.1
HERPUD2-202ENST00000396081 ARHGEF40Q8TER5 1519 aa21.92■■□□□ 1.1
HERPUD2-202ENST00000396081 SOX12O15370 315 aa21.92■■□□□ 1.1
HERPUD2-202ENST00000396081 RAPGEF3O95398 923 aa21.92■■□□□ 1.1
HERPUD2-202ENST00000396081 ATP2B3Q16720 1220 aa21.92■■□□□ 1.1
HERPUD2-202ENST00000396081 BCL2L12Q9HB09 334 aa21.92■■□□□ 1.1
HERPUD2-202ENST00000396081 PTPRCP08575 1304 aa21.92■■□□□ 1.1
HERPUD2-202ENST00000396081 UNC5CLQ8IV45 518 aa21.91■■□□□ 1.1
HERPUD2-202ENST00000396081 RGS12O14924 1447 aa21.91■■□□□ 1.1
HERPUD2-202ENST00000396081 GNAI2P04899 355 aa21.91■■□□□ 1.1
HERPUD2-202ENST00000396081 CHAF1AQ13111 956 aaPredicted RBP21.91■■□□□ 1.1
HERPUD2-202ENST00000396081 NECTIN2Q92692 538 aa21.91■■□□□ 1.1
HERPUD2-202ENST00000396081 NCKAP5LQ9HCH0 1330 aa21.9■■□□□ 1.1
HERPUD2-202ENST00000396081 POGZQ7Z3K3 1410 aa21.9■■□□□ 1.1
HERPUD2-202ENST00000396081 ANAPC15P60006 121 aa21.9■■□□□ 1.1
HERPUD2-202ENST00000396081 CHL1O00533 1208 aa21.9■■□□□ 1.1
HERPUD2-202ENST00000396081 KDM4AO75164 1064 aa21.9■■□□□ 1.1
HERPUD2-202ENST00000396081 PDCL2Q8N4E4 241 aa21.9■■□□□ 1.1
HERPUD2-202ENST00000396081 IL1RAPL2Q9NP60 686 aa21.9■■□□□ 1.1
HERPUD2-202ENST00000396081 MAP2P11137 1827 aaKnown RBP21.9■■□□□ 1.1
HERPUD2-202ENST00000396081 ANKRD26Q9UPS8 1709 aa21.89■■□□□ 1.1
HERPUD2-202ENST00000396081 SLC52A1Q9NWF4 448 aa21.89■■□□□ 1.1
HERPUD2-202ENST00000396081 YEATS2Q9ULM3 1422 aa21.89■■□□□ 1.1
HERPUD2-202ENST00000396081 FKBP5Q13451 457 aaPredicted RBP21.89■■□□□ 1.09
HERPUD2-202ENST00000396081 CHMP3Q9Y3E7 222 aa21.89■■□□□ 1.09
HERPUD2-202ENST00000396081 TCHHQ07283 1943 aa21.89■■□□□ 1.09
HERPUD2-202ENST00000396081 IGSF3O75054 1194 aa21.88■■□□□ 1.09
HERPUD2-202ENST00000396081 CDC42BPGQ6DT37 1551 aa21.88■■□□□ 1.09
HERPUD2-202ENST00000396081 ASXL2Q76L83 1435 aa21.88■■□□□ 1.09
HERPUD2-202ENST00000396081 IL25Q9H293 177 aa21.88■■□□□ 1.09
HERPUD2-202ENST00000396081 PYCARDQ9ULZ3 195 aa21.88■■□□□ 1.09
HERPUD2-202ENST00000396081 PNMA6EA0A0J9YXQ4 647 aa21.87■■□□□ 1.09
HERPUD2-202ENST00000396081 RIOK3O14730 519 aaKnown RBP21.86■■□□□ 1.09
HERPUD2-202ENST00000396081 ZSCAN22P10073 491 aaPredicted RBP21.86■■□□□ 1.09
HERPUD2-202ENST00000396081 UBE2HP62256 183 aa21.86■■□□□ 1.09
HERPUD2-202ENST00000396081 CCT4P50991 539 aaKnown RBP21.86■■□□□ 1.09
HERPUD2-202ENST00000396081 NUTM1Q86Y26 1132 aa21.86■■□□□ 1.09
HERPUD2-202ENST00000396081 LETM1O95202 739 aaPredicted RBP21.86■■□□□ 1.09
HERPUD2-202ENST00000396081 UTP14CQ5TAP6 766 aaKnown RBP21.86■■□□□ 1.09
HERPUD2-202ENST00000396081 SMC3Q9UQE7 1217 aa21.86■■□□□ 1.09
HERPUD2-202ENST00000396081 STX6O43752 255 aa21.85■■□□□ 1.09
HERPUD2-202ENST00000396081 GTF2F1P35269 517 aaKnown RBP eCLIP21.85■■□□□ 1.09
HERPUD2-202ENST00000396081 DIAPH3Q9NSV4 1193 aa21.85■■□□□ 1.09
HERPUD2-202ENST00000396081 TSPYL4Q9UJ04 414 aa21.85■■□□□ 1.09
HERPUD2-202ENST00000396081 SYT1P21579 422 aa21.85■■□□□ 1.09
HERPUD2-202ENST00000396081 FBXO31Q5XUX0 539 aaPredicted RBP21.85■■□□□ 1.09
HERPUD2-202ENST00000396081 U2AF2P26368 475 aaKnown RBP eCLIP21.84■■□□□ 1.09
HERPUD2-202ENST00000396081 BCL11BQ9C0K0 894 aaPredicted RBP21.84■■□□□ 1.09
HERPUD2-202ENST00000396081 SPTLC3Q9NUV7 552 aa21.84■■□□□ 1.09
HERPUD2-202ENST00000396081 NPM1P06748 294 aaKnown RBP eCLIP21.84■■□□□ 1.09
HERPUD2-202ENST00000396081 CPA1P15085 419 aa21.83■■□□□ 1.09
HERPUD2-202ENST00000396081 EIF4A2Q14240 407 aaKnown RBP21.83■■□□□ 1.09
HERPUD2-202ENST00000396081 KIF20BQ96Q89 1820 aa21.83■■□□□ 1.08
HERPUD2-202ENST00000396081 AP5Z1O43299 807 aa21.83■■□□□ 1.08
HERPUD2-202ENST00000396081 STK31Q9BXU1 1019 aa21.83■■□□□ 1.08
HERPUD2-202ENST00000396081 CPSF1Q10570 1443 aaKnown RBP21.83■■□□□ 1.08
HERPUD2-202ENST00000396081 KIAA1524Q8TCG1 905 aa21.82■■□□□ 1.08
HERPUD2-202ENST00000396081 RPAP1Q9BWH6 1393 aaPredicted RBP21.82■■□□□ 1.08
HERPUD2-202ENST00000396081 AK2P54819 239 aa21.82■■□□□ 1.08
HERPUD2-202ENST00000396081 DNM1Q05193 864 aaKnown RBP21.82■■□□□ 1.08
HERPUD2-202ENST00000396081 KCNF1Q9H3M0 494 aa21.82■■□□□ 1.08
HERPUD2-202ENST00000396081 DLG5Q8TDM6 1919 aa21.82■■□□□ 1.08
HERPUD2-202ENST00000396081 FRMPD1Q5SYB0 1578 aa21.81■■□□□ 1.08
HERPUD2-202ENST00000396081 HECW2Q9P2P5 1572 aa21.81■■□□□ 1.08
HERPUD2-202ENST00000396081 FOXO3O43524 673 aa21.81■■□□□ 1.08
HERPUD2-202ENST00000396081 SIGLEC1Q9BZZ2 1709 aa21.81■■□□□ 1.08
HERPUD2-202ENST00000396081 VPS37CA5D8V6 355 aaPredicted RBP21.81■■□□□ 1.08
HERPUD2-202ENST00000396081 F13A1P00488 732 aa21.81■■□□□ 1.08
HERPUD2-202ENST00000396081 RTF1Q92541 710 aaKnown RBP21.81■■□□□ 1.08
HERPUD2-202ENST00000396081 LRRFIP2Q9Y608 721 aaKnown RBP21.81■■□□□ 1.08
HERPUD2-202ENST00000396081 HSPA4P34932 840 aa21.8■■□□□ 1.08
HERPUD2-202ENST00000396081 DRC7Q8IY82 874 aa21.8■■□□□ 1.08
HERPUD2-202ENST00000396081 ATP6V1DQ9Y5K8 247 aa21.8■■□□□ 1.08
HERPUD2-202ENST00000396081 GOLGA6L6A8MZA4 724 aa21.8■■□□□ 1.08
HERPUD2-202ENST00000396081 CCDC83Q8IWF9 413 aa21.8■■□□□ 1.08
HERPUD2-202ENST00000396081 TMEM87AQ8NBN3 555 aa21.8■■□□□ 1.08
HERPUD2-202ENST00000396081 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.8■■□□□ 1.08
HERPUD2-202ENST00000396081 SALL3Q9BXA9 1300 aa21.8■■□□□ 1.08
HERPUD2-202ENST00000396081 CDK12Q9NYV4 1490 aaPredicted RBP21.8■■□□□ 1.08
HERPUD2-202ENST00000396081 DDX54Q8TDD1 881 aaKnown RBP21.79■■□□□ 1.08
HERPUD2-202ENST00000396081 GTPBP4Q9BZE4 634 aaKnown RBP21.79■■□□□ 1.08
HERPUD2-202ENST00000396081 GNAI3P08754 354 aa21.79■■□□□ 1.08
HERPUD2-202ENST00000396081 PTGS1P23219 599 aa21.78■■□□□ 1.08
HERPUD2-202ENST00000396081 ATP8B2P98198 1209 aa21.78■■□□□ 1.08
HERPUD2-202ENST00000396081 CAMK4Q16566 473 aa21.78■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms