RNA–Protein interactions for RNA: ENST00000395959.3

AC004987.2-201, humanhuman

BASIC

Gene AC004987.2, Length 1,148 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004987.2-201ENST00000395959 MBIPQ9NS73 344 aa20.85■□□□□ 0.93
AC004987.2-201ENST00000395959 FANCIQ9NVI1 1328 aa20.84■□□□□ 0.93
AC004987.2-201ENST00000395959 BTBD11A6QL63 1104 aa20.84■□□□□ 0.93
AC004987.2-201ENST00000395959 CT47B1P0C2W7 299 aaPredicted RBP20.83■□□□□ 0.93
AC004987.2-201ENST00000395959 SCN11AQ9UI33 1791 aa20.82■□□□□ 0.92
AC004987.2-201ENST00000395959 TSR2Q969E8 191 aaKnown RBP20.82■□□□□ 0.92
AC004987.2-201ENST00000395959 MRC1P22897 1456 aa20.81■□□□□ 0.92
AC004987.2-201ENST00000395959 BCL9O00512 1426 aa20.81■□□□□ 0.92
AC004987.2-201ENST00000395959 POTEAQ6S8J7 498 aa20.81■□□□□ 0.92
AC004987.2-201ENST00000395959 TMOD3Q9NYL9 352 aa20.81■□□□□ 0.92
AC004987.2-201ENST00000395959 MIS18AQ9NYP9 233 aa20.81■□□□□ 0.92
AC004987.2-201ENST00000395959 KRT27Q7Z3Y8 459 aa20.8■□□□□ 0.92
AC004987.2-201ENST00000395959 SOS1Q07889 1333 aaPredicted RBP20.78■□□□□ 0.92
AC004987.2-201ENST00000395959 PRIM1P49642 420 aaKnown RBP20.78■□□□□ 0.92
AC004987.2-201ENST00000395959 EXOSC9Q06265 439 aaKnown RBP20.78■□□□□ 0.92
AC004987.2-201ENST00000395959 ZNF790Q6PG37 636 aa20.78■□□□□ 0.92
AC004987.2-201ENST00000395959 FAM196AQ6ZSG2 479 aa20.77■□□□□ 0.92
AC004987.2-201ENST00000395959 TTC5Q8N0Z6 440 aa20.77■□□□□ 0.92
AC004987.2-201ENST00000395959 ZNF428Q96B54 188 aa20.77■□□□□ 0.92
AC004987.2-201ENST00000395959 CHMP4AQ9BY43 222 aa20.77■□□□□ 0.92
AC004987.2-201ENST00000395959 SOCS7O14512 581 aa20.76■□□□□ 0.91
AC004987.2-201ENST00000395959 PIGBQ92521 554 aa20.76■□□□□ 0.91
AC004987.2-201ENST00000395959 SYTL4Q96C24 671 aaPredicted RBP20.76■□□□□ 0.91
AC004987.2-201ENST00000395959 EIF4A1P60842 406 aaKnown RBP20.75■□□□□ 0.91
AC004987.2-201ENST00000395959 VIRMAQ69YN4 1812 aaKnown RBP20.75■□□□□ 0.91
AC004987.2-201ENST00000395959 SIPA1L3O60292 1781 aaPredicted RBP20.74■□□□□ 0.91
AC004987.2-201ENST00000395959 HOXB7P09629 217 aa20.73■□□□□ 0.91
AC004987.2-201ENST00000395959 TWISTNBQ3B726 338 aaPredicted RBP20.73■□□□□ 0.91
AC004987.2-201ENST00000395959 C8orf58Q8NAV2 365 aa20.73■□□□□ 0.91
AC004987.2-201ENST00000395959 ACSBG1Q96GR2 724 aa20.73■□□□□ 0.91
AC004987.2-201ENST00000395959 RCAN3Q9UKA8 241 aa20.73■□□□□ 0.91
AC004987.2-201ENST00000395959 SLC39A6Q13433 755 aa20.72■□□□□ 0.91
AC004987.2-201ENST00000395959 FMNL2Q96PY5 1086 aa20.72■□□□□ 0.91
AC004987.2-201ENST00000395959 KCNQ3O43525 872 aa20.71■□□□□ 0.91
AC004987.2-201ENST00000395959 VAMP4O75379 141 aa20.71■□□□□ 0.91
AC004987.2-201ENST00000395959 SMARCC1Q92922 1105 aaPredicted RBP20.71■□□□□ 0.91
AC004987.2-201ENST00000395959 TOGARAM1Q9Y4F4 1720 aa20.7■□□□□ 0.9
AC004987.2-201ENST00000395959 TSPYL6Q8N831 410 aa20.7■□□□□ 0.9
AC004987.2-201ENST00000395959 ATG3Q9NT62 314 aa20.7■□□□□ 0.9
AC004987.2-201ENST00000395959 HEG1Q9ULI3 1381 aa20.7■□□□□ 0.9
AC004987.2-201ENST00000395959 RGS12O14924 1447 aa20.7■□□□□ 0.9
AC004987.2-201ENST00000395959 KDM3BQ7LBC6 1761 aa20.69■□□□□ 0.9
AC004987.2-201ENST00000395959 ELL2O00472 640 aaPredicted RBP20.69■□□□□ 0.9
AC004987.2-201ENST00000395959 FAM182BQ5T319 152 aa20.69■□□□□ 0.9
AC004987.2-201ENST00000395959 BCL11BQ9C0K0 894 aaPredicted RBP20.69■□□□□ 0.9
AC004987.2-201ENST00000395959 ASAP1Q9ULH1 1129 aa20.69■□□□□ 0.9
AC004987.2-201ENST00000395959 KCNQ2O43526 872 aa20.68■□□□□ 0.9
AC004987.2-201ENST00000395959 GIGYF1O75420 1035 aaPredicted RBP20.68■□□□□ 0.9
AC004987.2-201ENST00000395959 SNRPA1P09661 255 aaKnown RBP20.68■□□□□ 0.9
AC004987.2-201ENST00000395959 ALDH1L2Q3SY69 923 aa20.68■□□□□ 0.9
AC004987.2-201ENST00000395959 VSIG10Q8N0Z9 540 aa20.68■□□□□ 0.9
AC004987.2-201ENST00000395959 ZNF496Q96IT1 587 aaPredicted RBP20.68■□□□□ 0.9
AC004987.2-201ENST00000395959 DOT1LQ8TEK3 1739 aa20.67■□□□□ 0.9
AC004987.2-201ENST00000395959 ITGB4P16144 1822 aa20.67■□□□□ 0.9
AC004987.2-201ENST00000395959 RARSP54136 660 aaKnown RBP20.67■□□□□ 0.9
AC004987.2-201ENST00000395959 KRT24Q2M2I5 525 aa20.67■□□□□ 0.9
AC004987.2-201ENST00000395959 TEX13AQ9BXU3 409 aaPredicted RBP20.66■□□□□ 0.9
AC004987.2-201ENST00000395959 BRWD3Q6RI45 1802 aa20.66■□□□□ 0.9
AC004987.2-201ENST00000395959 KAT6BQ8WYB5 2073 aa20.65■□□□□ 0.9
AC004987.2-201ENST00000395959 CCDC30Q5VVM6 783 aa20.65■□□□□ 0.9
AC004987.2-201ENST00000395959 PTCD1O75127 700 aaKnown RBP20.64■□□□□ 0.89
AC004987.2-201ENST00000395959 BRPF1P55201 1214 aaPredicted RBP20.63■□□□□ 0.89
AC004987.2-201ENST00000395959 PAPPAQ13219 1627 aa20.63■□□□□ 0.89
AC004987.2-201ENST00000395959 NHSQ6T4R5 1651 aa20.62■□□□□ 0.89
AC004987.2-201ENST00000395959 HDGFL1Q5TGJ6 251 aa20.62■□□□□ 0.89
AC004987.2-201ENST00000395959 RBM42Q9BTD8 480 aaKnown RBP20.62■□□□□ 0.89
AC004987.2-201ENST00000395959 STK31Q9BXU1 1019 aa20.62■□□□□ 0.89
AC004987.2-201ENST00000395959 HMGB2P26583 209 aaKnown RBP20.61■□□□□ 0.89
AC004987.2-201ENST00000395959 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.61■□□□□ 0.89
AC004987.2-201ENST00000395959 SSH1Q8WYL5 1049 aa20.61■□□□□ 0.89
AC004987.2-201ENST00000395959 SMC4Q9NTJ3 1288 aa20.61■□□□□ 0.89
AC004987.2-201ENST00000395959 KCPQ6ZWJ8 1503 aa20.61■□□□□ 0.89
AC004987.2-201ENST00000395959 PALLDQ8WX93 1383 aa20.6■□□□□ 0.89
AC004987.2-201ENST00000395959 TRIM37O94972 964 aa20.6■□□□□ 0.89
AC004987.2-201ENST00000395959 SUPT16HQ9Y5B9 1047 aaKnown RBP20.6■□□□□ 0.89
AC004987.2-201ENST00000395959 UBR2Q8IWV8 1755 aa20.59■□□□□ 0.89
AC004987.2-201ENST00000395959 LOC102724428A0A0B4J2F2 783 aa20.59■□□□□ 0.89
AC004987.2-201ENST00000395959 STARD3NLO95772 234 aa20.59■□□□□ 0.89
AC004987.2-201ENST00000395959 EIF2S2P20042 333 aaKnown RBP20.59■□□□□ 0.89
AC004987.2-201ENST00000395959 SIK1P57059 783 aa20.59■□□□□ 0.89
AC004987.2-201ENST00000395959 DBF4Q9UBU7 674 aaPredicted RBP20.59■□□□□ 0.89
AC004987.2-201ENST00000395959 RNF123Q5XPI4 1314 aa20.58■□□□□ 0.89
AC004987.2-201ENST00000395959 SBF2Q86WG5 1849 aa20.58■□□□□ 0.89
AC004987.2-201ENST00000395959 IPO8O15397 1037 aaKnown RBP20.58■□□□□ 0.89
AC004987.2-201ENST00000395959 BCAR3O75815 825 aa20.58■□□□□ 0.89
AC004987.2-201ENST00000395959 PTF1AQ7RTS3 328 aa20.58■□□□□ 0.89
AC004987.2-201ENST00000395959 MRPL50Q8N5N7 158 aaKnown RBP20.58■□□□□ 0.89
AC004987.2-201ENST00000395959 ERBB4Q15303 1308 aa20.57■□□□□ 0.88
AC004987.2-201ENST00000395959 SLC4A2P04920 1241 aa20.57■□□□□ 0.88
AC004987.2-201ENST00000395959 USP16Q9Y5T5 823 aa20.57■□□□□ 0.88
AC004987.2-201ENST00000395959 KIF16BQ96L93 1317 aa20.56■□□□□ 0.88
AC004987.2-201ENST00000395959 PRAMEF22A3QJZ6 481 aa20.56■□□□□ 0.88
AC004987.2-201ENST00000395959 ATP6V1AP38606 617 aa20.56■□□□□ 0.88
AC004987.2-201ENST00000395959 ARHGAP45Q92619 1136 aa20.55■□□□□ 0.88
AC004987.2-201ENST00000395959 SLC4A9Q96Q91 983 aa20.55■□□□□ 0.88
AC004987.2-201ENST00000395959 BCL2L13Q9BXK5 485 aa20.55■□□□□ 0.88
AC004987.2-201ENST00000395959 DDX21Q9NR30 783 aaKnown RBP eCLIP20.55■□□□□ 0.88
AC004987.2-201ENST00000395959 HYPKQ9NX55 129 aa20.55■□□□□ 0.88
AC004987.2-201ENST00000395959 PLSCR1O15162 318 aa20.54■□□□□ 0.88
AC004987.2-201ENST00000395959 MS4A1P11836 297 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms