RNA–Protein interactions for RNA: ENST00000394555.6

EFEMP1-202, Transcript of EGF containing fibulin extracellular matrix protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFEMP1, Length 3,024 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFEMP1-202ENST00000394555 NCKAP5LQ9HCH0 1330 aa19.85■□□□□ 0.77
EFEMP1-202ENST00000394555 KIF20BQ96Q89 1820 aa19.85■□□□□ 0.77
EFEMP1-202ENST00000394555 SLC52A1Q9NWF4 448 aa19.85■□□□□ 0.77
EFEMP1-202ENST00000394555 DTNBO60941 627 aa19.85■□□□□ 0.77
EFEMP1-202ENST00000394555 CNPY2Q9Y2B0 182 aa19.85■□□□□ 0.77
EFEMP1-202ENST00000394555 INTS4Q96HW7 963 aaKnown RBP19.84■□□□□ 0.77
EFEMP1-202ENST00000394555 MX1P20591 662 aa19.84■□□□□ 0.77
EFEMP1-202ENST00000394555 HAP1P54257 671 aaPredicted RBP19.84■□□□□ 0.77
EFEMP1-202ENST00000394555 ZNF710Q8N1W2 664 aa19.84■□□□□ 0.77
EFEMP1-202ENST00000394555 OSBPL3Q9H4L5 887 aa19.84■□□□□ 0.77
EFEMP1-202ENST00000394555 CHMLP26374 656 aa19.84■□□□□ 0.77
EFEMP1-202ENST00000394555 SRCIN1Q9C0H9 1055 aa19.84■□□□□ 0.77
EFEMP1-202ENST00000394555 PTPRCP08575 1304 aa19.83■□□□□ 0.77
EFEMP1-202ENST00000394555 WDR33Q9C0J8 1336 aaKnown RBP19.83■□□□□ 0.77
EFEMP1-202ENST00000394555 DLG5Q8TDM6 1919 aa19.83■□□□□ 0.77
EFEMP1-202ENST00000394555 CHL1O00533 1208 aa19.83■□□□□ 0.76
EFEMP1-202ENST00000394555 LRRCC1Q9C099 1032 aa19.83■□□□□ 0.76
EFEMP1-202ENST00000394555 UNC5CLQ8IV45 518 aa19.82■□□□□ 0.76
EFEMP1-202ENST00000394555 PRIMPOLQ96LW4 560 aa19.82■□□□□ 0.76
EFEMP1-202ENST00000394555 FAM184AQ8NB25 1140 aa19.82■□□□□ 0.76
EFEMP1-202ENST00000394555 HMGN5P82970 282 aaKnown RBP19.81■□□□□ 0.76
EFEMP1-202ENST00000394555 CCDC183Q5T5S1 534 aa19.81■□□□□ 0.76
EFEMP1-202ENST00000394555 FBXO31Q5XUX0 539 aaPredicted RBP19.81■□□□□ 0.76
EFEMP1-202ENST00000394555 PIK3C2BO00750 1634 aa19.81■□□□□ 0.76
EFEMP1-202ENST00000394555 MAP4K4O95819 1239 aaPredicted RBP19.81■□□□□ 0.76
EFEMP1-202ENST00000394555 SOX12O15370 315 aa19.81■□□□□ 0.76
EFEMP1-202ENST00000394555 FIBPO43427 364 aa19.81■□□□□ 0.76
EFEMP1-202ENST00000394555 GNAI2P04899 355 aa19.81■□□□□ 0.76
EFEMP1-202ENST00000394555 PPP4R3BQ5MIZ7 849 aa19.81■□□□□ 0.76
EFEMP1-202ENST00000394555 KIF3AQ9Y496 699 aa19.81■□□□□ 0.76
EFEMP1-202ENST00000394555 TCHHQ07283 1943 aa19.8■□□□□ 0.76
EFEMP1-202ENST00000394555 UVSSAQ2YD98 709 aa19.8■□□□□ 0.76
EFEMP1-202ENST00000394555 NECTIN2Q92692 538 aa19.8■□□□□ 0.76
EFEMP1-202ENST00000394555 IL25Q9H293 177 aa19.8■□□□□ 0.76
EFEMP1-202ENST00000394555 PNMA6EA0A0J9YXQ4 647 aa19.79■□□□□ 0.76
EFEMP1-202ENST00000394555 NPM1P06748 294 aaKnown RBP eCLIP19.79■□□□□ 0.76
EFEMP1-202ENST00000394555 ANAPC15P60006 121 aa19.79■□□□□ 0.76
EFEMP1-202ENST00000394555 GIMAP6Q6P9H5 292 aa19.79■□□□□ 0.76
EFEMP1-202ENST00000394555 SPC24Q8NBT2 197 aa19.79■□□□□ 0.76
EFEMP1-202ENST00000394555 IL1RAPL2Q9NP60 686 aa19.78■□□□□ 0.76
EFEMP1-202ENST00000394555 SPDYE4A6NLX3 237 aa19.78■□□□□ 0.76
EFEMP1-202ENST00000394555 ZSCAN20P17040 1043 aaPredicted RBP19.78■□□□□ 0.76
EFEMP1-202ENST00000394555 CPSF1Q10570 1443 aaKnown RBP19.78■□□□□ 0.76
EFEMP1-202ENST00000394555 MYO5BQ9ULV0 1848 aa19.77■□□□□ 0.76
EFEMP1-202ENST00000394555 MLH3Q9UHC1 1453 aa19.77■□□□□ 0.76
EFEMP1-202ENST00000394555 EIF4A2Q14240 407 aaKnown RBP19.77■□□□□ 0.76
EFEMP1-202ENST00000394555 CDK12Q9NYV4 1490 aaPredicted RBP19.77■□□□□ 0.76
EFEMP1-202ENST00000394555 CCT4P50991 539 aaKnown RBP19.77■□□□□ 0.76
EFEMP1-202ENST00000394555 KDM4AO75164 1064 aa19.76■□□□□ 0.75
EFEMP1-202ENST00000394555 ATP2B3Q16720 1220 aa19.76■□□□□ 0.75
EFEMP1-202ENST00000394555 DMTNQ08495 405 aa19.76■□□□□ 0.75
EFEMP1-202ENST00000394555 CLTCQ00610 1675 aaKnown RBP19.76■□□□□ 0.75
EFEMP1-202ENST00000394555 FOXO3O43524 673 aa19.76■□□□□ 0.75
EFEMP1-202ENST00000394555 NUTM1Q86Y26 1132 aa19.76■□□□□ 0.75
EFEMP1-202ENST00000394555 BCL2L12Q9HB09 334 aa19.76■□□□□ 0.75
EFEMP1-202ENST00000394555 TSPYL4Q9UJ04 414 aa19.76■□□□□ 0.75
EFEMP1-202ENST00000394555 FKBP5Q13451 457 aaPredicted RBP19.75■□□□□ 0.75
EFEMP1-202ENST00000394555 ZSCAN22P10073 491 aaPredicted RBP19.75■□□□□ 0.75
EFEMP1-202ENST00000394555 SALL3Q9BXA9 1300 aa19.74■□□□□ 0.75
EFEMP1-202ENST00000394555 SYT1P21579 422 aa19.74■□□□□ 0.75
EFEMP1-202ENST00000394555 UBE2HP62256 183 aa19.74■□□□□ 0.75
EFEMP1-202ENST00000394555 PYCARDQ9ULZ3 195 aa19.74■□□□□ 0.75
EFEMP1-202ENST00000394555 RPAP1Q9BWH6 1393 aaPredicted RBP19.74■□□□□ 0.75
EFEMP1-202ENST00000394555 ATP7BP35670 1465 aa19.74■□□□□ 0.75
EFEMP1-202ENST00000394555 EDC4Q6P2E9 1401 aaKnown RBP19.73■□□□□ 0.75
EFEMP1-202ENST00000394555 STX6O43752 255 aa19.73■□□□□ 0.75
EFEMP1-202ENST00000394555 CHMP3Q9Y3E7 222 aa19.73■□□□□ 0.75
EFEMP1-202ENST00000394555 WASLO00401 505 aaPredicted RBP19.73■□□□□ 0.75
EFEMP1-202ENST00000394555 CPA1P15085 419 aa19.73■□□□□ 0.75
EFEMP1-202ENST00000394555 NUDT16Q96DE0 195 aaKnown RBP19.73■□□□□ 0.75
EFEMP1-202ENST00000394555 KIAA0232Q92628 1395 aa19.73■□□□□ 0.75
EFEMP1-202ENST00000394555 AP5Z1O43299 807 aa19.73■□□□□ 0.75
EFEMP1-202ENST00000394555 GTF2F1P35269 517 aaKnown RBP eCLIP19.73■□□□□ 0.75
EFEMP1-202ENST00000394555 LETM1O95202 739 aaPredicted RBP19.72■□□□□ 0.75
EFEMP1-202ENST00000394555 TXNDC2Q86VQ3 553 aa19.72■□□□□ 0.75
EFEMP1-202ENST00000394555 SPTLC3Q9NUV7 552 aa19.72■□□□□ 0.75
EFEMP1-202ENST00000394555 ALKQ9UM73 1620 aa19.72■□□□□ 0.75
EFEMP1-202ENST00000394555 AATKQ6ZMQ8 1374 aa19.72■□□□□ 0.75
EFEMP1-202ENST00000394555 CHAF1AQ13111 956 aaPredicted RBP19.72■□□□□ 0.75
EFEMP1-202ENST00000394555 HSP90AB2PQ58FF8 381 aa19.72■□□□□ 0.75
EFEMP1-202ENST00000394555 PDCL2Q8N4E4 241 aa19.72■□□□□ 0.75
EFEMP1-202ENST00000394555 STK31Q9BXU1 1019 aa19.72■□□□□ 0.75
EFEMP1-202ENST00000394555 SMC3Q9UQE7 1217 aa19.72■□□□□ 0.75
EFEMP1-202ENST00000394555 LRRFIP2Q9Y608 721 aaKnown RBP19.72■□□□□ 0.75
EFEMP1-202ENST00000394555 HSPA4P34932 840 aa19.71■□□□□ 0.75
EFEMP1-202ENST00000394555 AK2P54819 239 aa19.71■□□□□ 0.75
EFEMP1-202ENST00000394555 RIOK3O14730 519 aaKnown RBP19.71■□□□□ 0.75
EFEMP1-202ENST00000394555 RTF1Q92541 710 aaKnown RBP19.71■□□□□ 0.75
EFEMP1-202ENST00000394555 PODXL2Q9NZ53 605 aa19.71■□□□□ 0.75
EFEMP1-202ENST00000394555 KCNF1Q9H3M0 494 aa19.7■□□□□ 0.74
EFEMP1-202ENST00000394555 IGSF3O75054 1194 aa19.7■□□□□ 0.74
EFEMP1-202ENST00000394555 ATP8B2P98198 1209 aa19.7■□□□□ 0.74
EFEMP1-202ENST00000394555 DNM1Q05193 864 aaKnown RBP19.7■□□□□ 0.74
EFEMP1-202ENST00000394555 TMEM87AQ8NBN3 555 aa19.7■□□□□ 0.74
EFEMP1-202ENST00000394555 NUTM2FA1L443 756 aa19.7■□□□□ 0.74
EFEMP1-202ENST00000394555 F13A1P00488 732 aa19.7■□□□□ 0.74
EFEMP1-202ENST00000394555 A0A0U1RQG5 324 aaPredicted RBP19.69■□□□□ 0.74
EFEMP1-202ENST00000394555 RASEFQ8IZ41 740 aa19.69■□□□□ 0.74
EFEMP1-202ENST00000394555 KIAA1524Q8TCG1 905 aa19.69■□□□□ 0.74
EFEMP1-202ENST00000394555 SNX14Q9Y5W7 946 aa19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms