RNA–Protein interactions for RNA: ENST00000394157.7

PSEN1-203, Transcript of presenilin 1, humanhuman

TSL 2 BASIC

Gene PSEN1, Length 1,249 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-203ENST00000394157 SBF2Q86WG5 1849 aa25.29■■□□□ 1.64
PSEN1-203ENST00000394157 PRIM1P49642 420 aaKnown RBP25.29■■□□□ 1.64
PSEN1-203ENST00000394157 BABAM1Q9NWV8 329 aa25.29■■□□□ 1.64
PSEN1-203ENST00000394157 BCL11BQ9C0K0 894 aaPredicted RBP25.28■■□□□ 1.64
PSEN1-203ENST00000394157 SALL2Q9Y467 1007 aaPredicted RBP25.28■■□□□ 1.64
PSEN1-203ENST00000394157 IL16Q14005 1332 aa25.28■■□□□ 1.64
PSEN1-203ENST00000394157 ZNF521Q96K83 1311 aa25.28■■□□□ 1.64
PSEN1-203ENST00000394157 TAF7Q15545 349 aaPredicted RBP25.27■■□□□ 1.64
PSEN1-203ENST00000394157 NFATC2IPQ8NCF5 419 aa25.27■■□□□ 1.64
PSEN1-203ENST00000394157 ITGB4P16144 1822 aa25.27■■□□□ 1.64
PSEN1-203ENST00000394157 SIPA1L3O60292 1781 aaPredicted RBP25.26■■□□□ 1.63
PSEN1-203ENST00000394157 SYTL4Q96C24 671 aaPredicted RBP25.26■■□□□ 1.63
PSEN1-203ENST00000394157 ACSBG1Q96GR2 724 aa25.26■■□□□ 1.63
PSEN1-203ENST00000394157 THUMPD2Q9BTF0 503 aaKnown RBP25.26■■□□□ 1.63
PSEN1-203ENST00000394157 ZBED9Q6R2W3 1325 aa25.26■■□□□ 1.63
PSEN1-203ENST00000394157 SENP3-EIF4A1A0A087X0R7 540 aa25.24■■□□□ 1.63
PSEN1-203ENST00000394157 GNAI1P63096 354 aa25.24■■□□□ 1.63
PSEN1-203ENST00000394157 PIGBQ92521 554 aa25.24■■□□□ 1.63
PSEN1-203ENST00000394157 IFT57Q9NWB7 429 aa25.24■■□□□ 1.63
PSEN1-203ENST00000394157 KAT6BQ8WYB5 2073 aa25.24■■□□□ 1.63
PSEN1-203ENST00000394157 KCNQ2O43526 872 aa25.23■■□□□ 1.63
PSEN1-203ENST00000394157 CFAP44Q96MT7 982 aa25.23■■□□□ 1.63
PSEN1-203ENST00000394157 BTBD11A6QL63 1104 aa25.21■■□□□ 1.63
PSEN1-203ENST00000394157 TRIM37O94972 964 aa25.21■■□□□ 1.63
PSEN1-203ENST00000394157 GOLGA2Q08379 1002 aa25.21■■□□□ 1.63
PSEN1-203ENST00000394157 CHL1O00533 1208 aa25.2■■□□□ 1.62
PSEN1-203ENST00000394157 ZNF853P0CG23 659 aa25.2■■□□□ 1.62
PSEN1-203ENST00000394157 CCDC125Q86Z20 511 aa25.2■■□□□ 1.62
PSEN1-203ENST00000394157 SMARCC1Q92922 1105 aaPredicted RBP25.2■■□□□ 1.62
PSEN1-203ENST00000394157 EP400Q96L91 3159 aa25.19■■□□□ 1.62
PSEN1-203ENST00000394157 BTAF1O14981 1849 aa25.18■■□□□ 1.62
PSEN1-203ENST00000394157 PAPPAQ13219 1627 aa25.18■■□□□ 1.62
PSEN1-203ENST00000394157 E9PSI1 815 aa25.17■■□□□ 1.62
PSEN1-203ENST00000394157 ZNF790Q6PG37 636 aa25.17■■□□□ 1.62
PSEN1-203ENST00000394157 TTC5Q8N0Z6 440 aa25.17■■□□□ 1.62
PSEN1-203ENST00000394157 MYH16Q9H6N6 1097 aa25.17■■□□□ 1.62
PSEN1-203ENST00000394157 TSPYL4Q9UJ04 414 aa25.17■■□□□ 1.62
PSEN1-203ENST00000394157 KDM3BQ7LBC6 1761 aa25.16■■□□□ 1.62
PSEN1-203ENST00000394157 ATG3Q9NT62 314 aa25.15■■□□□ 1.62
PSEN1-203ENST00000394157 LAS1LQ9Y4W2 734 aaKnown RBP25.15■■□□□ 1.62
PSEN1-203ENST00000394157 SF3B2Q13435 895 aaKnown RBP25.14■■□□□ 1.62
PSEN1-203ENST00000394157 PTF1AQ7RTS3 328 aa25.14■■□□□ 1.62
PSEN1-203ENST00000394157 ASAP1Q9ULH1 1129 aa25.14■■□□□ 1.62
PSEN1-203ENST00000394157 TNS1Q9HBL0 1735 aaKnown RBP25.14■■□□□ 1.61
PSEN1-203ENST00000394157 PLSCR1O15162 318 aa25.13■■□□□ 1.61
PSEN1-203ENST00000394157 MBIPQ9NS73 344 aa25.13■■□□□ 1.61
PSEN1-203ENST00000394157 SLFN5Q08AF3 891 aa25.12■■□□□ 1.61
PSEN1-203ENST00000394157 YTHDC1Q96MU7 727 aaKnown RBP25.12■■□□□ 1.61
PSEN1-203ENST00000394157 MIS18AQ9NYP9 233 aa25.12■■□□□ 1.61
PSEN1-203ENST00000394157 PALLDQ8WX93 1383 aa25.12■■□□□ 1.61
PSEN1-203ENST00000394157 UBR2Q8IWV8 1755 aa25.12■■□□□ 1.61
PSEN1-203ENST00000394157 HMGB2P26583 209 aaKnown RBP25.11■■□□□ 1.61
PSEN1-203ENST00000394157 SLC39A6Q13433 755 aa25.11■■□□□ 1.61
PSEN1-203ENST00000394157 FMNL2Q96PY5 1086 aa25.11■■□□□ 1.61
PSEN1-203ENST00000394157 APBA3O96018 575 aa25.1■■□□□ 1.61
PSEN1-203ENST00000394157 VSIG10Q8N0Z9 540 aa25.1■■□□□ 1.61
PSEN1-203ENST00000394157 RGPD3A6NKT7 1758 aaPredicted RBP25.1■■□□□ 1.61
PSEN1-203ENST00000394157 RGPD4Q7Z3J3 1758 aa25.1■■□□□ 1.61
PSEN1-203ENST00000394157 KCPQ6ZWJ8 1503 aa25.09■■□□□ 1.61
PSEN1-203ENST00000394157 EIF4A1P60842 406 aaKnown RBP25.09■■□□□ 1.61
PSEN1-203ENST00000394157 TRMT2AQ8IZ69 625 aaKnown RBP25.09■■□□□ 1.61
PSEN1-203ENST00000394157 SPINK5Q9NQ38 1064 aaPredicted RBP25.09■■□□□ 1.61
PSEN1-203ENST00000394157 ZNF831Q5JPB2 1677 aa25.09■■□□□ 1.61
PSEN1-203ENST00000394157 FANCIQ9NVI1 1328 aa25.09■■□□□ 1.61
PSEN1-203ENST00000394157 LY75O60449 1722 aa25.08■■□□□ 1.61
PSEN1-203ENST00000394157 KCNQ3O43525 872 aa25.07■■□□□ 1.6
PSEN1-203ENST00000394157 BAG6P46379 1132 aa25.07■■□□□ 1.6
PSEN1-203ENST00000394157 ZNF496Q96IT1 587 aaPredicted RBP25.07■■□□□ 1.6
PSEN1-203ENST00000394157 SOS1Q07889 1333 aaPredicted RBP25.07■■□□□ 1.6
PSEN1-203ENST00000394157 HEG1Q9ULI3 1381 aa25.06■■□□□ 1.6
PSEN1-203ENST00000394157 LOC102724428A0A0B4J2F2 783 aa25.06■■□□□ 1.6
PSEN1-203ENST00000394157 SIK1P57059 783 aa25.06■■□□□ 1.6
PSEN1-203ENST00000394157 TSR2Q969E8 191 aaKnown RBP25.06■■□□□ 1.6
PSEN1-203ENST00000394157 CDCA7LQ96GN5 454 aa25.06■■□□□ 1.6
PSEN1-203ENST00000394157 CICQ96RK0 1608 aaPredicted RBP25.05■■□□□ 1.6
PSEN1-203ENST00000394157 PTCD1O75127 700 aaKnown RBP25.05■■□□□ 1.6
PSEN1-203ENST00000394157 HOXB7P09629 217 aa25.05■■□□□ 1.6
PSEN1-203ENST00000394157 SLC27A3Q5K4L6 730 aa25.05■■□□□ 1.6
PSEN1-203ENST00000394157 RBM42Q9BTD8 480 aaKnown RBP25.05■■□□□ 1.6
PSEN1-203ENST00000394157 TEX13AQ9BXU3 409 aaPredicted RBP25.05■■□□□ 1.6
PSEN1-203ENST00000394157 SNRPA1P09661 255 aaKnown RBP25.04■■□□□ 1.6
PSEN1-203ENST00000394157 UPF1Q92900 1129 aaKnown RBP eCLIP25.04■■□□□ 1.6
PSEN1-203ENST00000394157 CHMP4AQ9BY43 222 aa25.04■■□□□ 1.6
PSEN1-203ENST00000394157 DUSP27Q5VZP5 1158 aa25.03■■□□□ 1.6
PSEN1-203ENST00000394157 GIGYF1O75420 1035 aaPredicted RBP25.01■■□□□ 1.59
PSEN1-203ENST00000394157 ATP6V1AP38606 617 aa25.01■■□□□ 1.59
PSEN1-203ENST00000394157 CCNL1Q9UK58 526 aaPredicted RBP25.01■■□□□ 1.59
PSEN1-203ENST00000394157 TXNRD1Q16881 649 aa25■■□□□ 1.59
PSEN1-203ENST00000394157 CAMKK2Q96RR4 588 aa25■■□□□ 1.59
PSEN1-203ENST00000394157 CT47B1P0C2W7 299 aaPredicted RBP24.99■■□□□ 1.59
PSEN1-203ENST00000394157 EXOSC9Q06265 439 aaKnown RBP24.99■■□□□ 1.59
PSEN1-203ENST00000394157 SLC4A9Q96Q91 983 aa24.99■■□□□ 1.59
PSEN1-203ENST00000394157 STARD3NLO95772 234 aa24.97■■□□□ 1.59
PSEN1-203ENST00000394157 C8orf58Q8NAV2 365 aa24.97■■□□□ 1.59
PSEN1-203ENST00000394157 TJP1Q07157 1748 aa24.97■■□□□ 1.59
PSEN1-203ENST00000394157 EN1Q05925 392 aaPredicted RBP24.96■■□□□ 1.59
PSEN1-203ENST00000394157 TWISTNBQ3B726 338 aaPredicted RBP24.96■■□□□ 1.59
PSEN1-203ENST00000394157 PROM2Q8N271 834 aa24.96■■□□□ 1.59
PSEN1-203ENST00000394157 ZNF428Q96B54 188 aa24.96■■□□□ 1.59
PSEN1-203ENST00000394157 LAMB4A4D0S4 1761 aa24.95■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms