RNA–Protein interactions for RNA: ENST00000394105.6

GAPVD1-207, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene GAPVD1, Length 5,207 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-207ENST00000394105 FLT4P35916 1363 aa9.81□□□□□ -0.84
GAPVD1-207ENST00000394105 KIF24Q5T7B8 1368 aa9.81□□□□□ -0.84
GAPVD1-207ENST00000394105 AFDNP55196 1824 aaKnown RBP9.81□□□□□ -0.84
GAPVD1-207ENST00000394105 NSFL1CQ9UNZ2 370 aaKnown RBP9.8□□□□□ -0.84
GAPVD1-207ENST00000394105 RTL5Q5HYW3 569 aaPredicted RBP9.8□□□□□ -0.84
GAPVD1-207ENST00000394105 LGR6Q9HBX8 967 aa9.8□□□□□ -0.84
GAPVD1-207ENST00000394105 DDRGK1Q96HY6 314 aa9.8□□□□□ -0.84
GAPVD1-207ENST00000394105 IL17RAQ96F46 866 aa9.8□□□□□ -0.84
GAPVD1-207ENST00000394105 MEGF6O75095 1541 aa9.79□□□□□ -0.84
GAPVD1-207ENST00000394105 SMARCA5O60264 1052 aaPredicted RBP9.79□□□□□ -0.84
GAPVD1-207ENST00000394105 PDIA6Q15084 440 aa9.79□□□□□ -0.84
GAPVD1-207ENST00000394105 BMP2KLQ5H9B9 411 aa9.79□□□□□ -0.84
GAPVD1-207ENST00000394105 ITPRIPQ8IWB1 547 aa9.79□□□□□ -0.84
GAPVD1-207ENST00000394105 CFAP53Q96M91 514 aa9.79□□□□□ -0.84
GAPVD1-207ENST00000394105 PXDNLA1KZ92 1463 aa9.79□□□□□ -0.84
GAPVD1-207ENST00000394105 MYH15Q9Y2K3 1946 aa9.78□□□□□ -0.84
GAPVD1-207ENST00000394105 TSHZ3Q63HK5 1081 aa9.78□□□□□ -0.84
GAPVD1-207ENST00000394105 GAS2L2Q8NHY3 880 aa9.78□□□□□ -0.84
GAPVD1-207ENST00000394105 DDX19BQ9UMR2 479 aa9.78□□□□□ -0.84
GAPVD1-207ENST00000394105 USHBP1Q8N6Y0 703 aa9.78□□□□□ -0.84
GAPVD1-207ENST00000394105 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.78□□□□□ -0.84
GAPVD1-207ENST00000394105 COL15A1P39059 1388 aa9.78□□□□□ -0.84
GAPVD1-207ENST00000394105 ITGB4P16144 1822 aa9.78□□□□□ -0.84
GAPVD1-207ENST00000394105 AAMPQ13685 434 aa9.78□□□□□ -0.84
GAPVD1-207ENST00000394105 ORAI2Q96SN7 254 aa9.78□□□□□ -0.84
GAPVD1-207ENST00000394105 WNK3Q9BYP7 1800 aa9.77□□□□□ -0.84
GAPVD1-207ENST00000394105 ANKRD44Q8N8A2 993 aa9.77□□□□□ -0.84
GAPVD1-207ENST00000394105 USP44Q9H0E7 712 aa9.77□□□□□ -0.84
GAPVD1-207ENST00000394105 PHAXQ9H814 394 aaKnown RBP9.77□□□□□ -0.84
GAPVD1-207ENST00000394105 NUTM2GQ5VZR2 741 aa9.77□□□□□ -0.85
GAPVD1-207ENST00000394105 KIF16BQ96L93 1317 aa9.77□□□□□ -0.85
GAPVD1-207ENST00000394105 PROSER3Q2NL68 480 aa9.77□□□□□ -0.85
GAPVD1-207ENST00000394105 TNPO1Q92973 898 aaKnown RBP9.77□□□□□ -0.85
GAPVD1-207ENST00000394105 COG3Q96JB2 828 aa9.76□□□□□ -0.85
GAPVD1-207ENST00000394105 A0A1B0GUL6 1792 aa9.76□□□□□ -0.85
GAPVD1-207ENST00000394105 KCPQ6ZWJ8 1503 aa9.76□□□□□ -0.85
GAPVD1-207ENST00000394105 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.76□□□□□ -0.85
GAPVD1-207ENST00000394105 PALD1Q9ULE6 856 aa9.76□□□□□ -0.85
GAPVD1-207ENST00000394105 AKAP11Q9UKA4 1901 aa9.76□□□□□ -0.85
GAPVD1-207ENST00000394105 C22orf23Q9BZE7 217 aa9.75□□□□□ -0.85
GAPVD1-207ENST00000394105 GZF1Q9H116 711 aaPredicted RBP9.75□□□□□ -0.85
GAPVD1-207ENST00000394105 ABCC6O95255 1503 aa9.75□□□□□ -0.85
GAPVD1-207ENST00000394105 TTC21AQ8NDW8 1320 aa9.75□□□□□ -0.85
GAPVD1-207ENST00000394105 LRRC59Q96AG4 307 aaKnown RBP9.75□□□□□ -0.85
GAPVD1-207ENST00000394105 ST3GAL1Q11201 340 aa9.75□□□□□ -0.85
GAPVD1-207ENST00000394105 DDX17Q92841 729 aaKnown RBP9.75□□□□□ -0.85
GAPVD1-207ENST00000394105 ECM29Q5VYK3 1845 aa9.74□□□□□ -0.85
GAPVD1-207ENST00000394105 CLEC17AQ6ZS10 378 aa9.74□□□□□ -0.85
GAPVD1-207ENST00000394105 JARID2Q92833 1246 aaPredicted RBP9.74□□□□□ -0.85
GAPVD1-207ENST00000394105 ZNF428Q96B54 188 aa9.74□□□□□ -0.85
GAPVD1-207ENST00000394105 RAB3GAP1Q15042 981 aa9.74□□□□□ -0.85
GAPVD1-207ENST00000394105 USP26Q9BXU7 913 aa9.74□□□□□ -0.85
GAPVD1-207ENST00000394105 OSBPL3Q9H4L5 887 aa9.74□□□□□ -0.85
GAPVD1-207ENST00000394105 C1orf167Q5SNV9 1468 aa9.74□□□□□ -0.85
GAPVD1-207ENST00000394105 GNAI1P63096 354 aa9.73□□□□□ -0.85
GAPVD1-207ENST00000394105 SDSP20132 328 aa9.73□□□□□ -0.85
GAPVD1-207ENST00000394105 COL16A1Q07092 1604 aaPredicted RBP9.73□□□□□ -0.85
GAPVD1-207ENST00000394105 CHGBP05060 677 aa9.73□□□□□ -0.85
GAPVD1-207ENST00000394105 SNX21Q969T3 373 aa9.73□□□□□ -0.85
GAPVD1-207ENST00000394105 IBTKQ9P2D0 1353 aaPredicted RBP9.73□□□□□ -0.85
GAPVD1-207ENST00000394105 TRAK2O60296 914 aa9.72□□□□□ -0.85
GAPVD1-207ENST00000394105 PI4K2BQ8TCG2 481 aa9.72□□□□□ -0.85
GAPVD1-207ENST00000394105 TAF6LQ9Y6J9 622 aa9.72□□□□□ -0.85
GAPVD1-207ENST00000394105 NBPF7P0C2Y1 421 aaPredicted RBP9.72□□□□□ -0.85
GAPVD1-207ENST00000394105 CLCN1P35523 988 aa9.72□□□□□ -0.85
GAPVD1-207ENST00000394105 TTC22Q5TAA0 569 aa9.72□□□□□ -0.85
GAPVD1-207ENST00000394105 RWDD1Q9H446 243 aaPredicted RBP9.72□□□□□ -0.85
GAPVD1-207ENST00000394105 MFAP1P55081 439 aaKnown RBP9.72□□□□□ -0.85
GAPVD1-207ENST00000394105 POLA2Q14181 598 aa9.71□□□□□ -0.85
GAPVD1-207ENST00000394105 ARHGEF25Q86VW2 580 aa9.71□□□□□ -0.85
GAPVD1-207ENST00000394105 SSFA2P28290 1259 aa9.71□□□□□ -0.85
GAPVD1-207ENST00000394105 EIF4A1P60842 406 aaKnown RBP9.71□□□□□ -0.85
GAPVD1-207ENST00000394105 DTNBO60941 627 aa9.71□□□□□ -0.86
GAPVD1-207ENST00000394105 SOS1Q07889 1333 aaPredicted RBP9.71□□□□□ -0.86
GAPVD1-207ENST00000394105 SOX12O15370 315 aa9.71□□□□□ -0.86
GAPVD1-207ENST00000394105 GPT2Q8TD30 523 aa9.71□□□□□ -0.86
GAPVD1-207ENST00000394105 MAP3K5Q99683 1374 aa9.7□□□□□ -0.86
GAPVD1-207ENST00000394105 ANXA1P04083 346 aa9.7□□□□□ -0.86
GAPVD1-207ENST00000394105 SLC4A2P04920 1241 aa9.7□□□□□ -0.86
GAPVD1-207ENST00000394105 ZGPATQ8N5A5 531 aaKnown RBP9.69□□□□□ -0.86
GAPVD1-207ENST00000394105 ARXQ96QS3 562 aa9.69□□□□□ -0.86
GAPVD1-207ENST00000394105 BEND3Q5T5X7 828 aa9.69□□□□□ -0.86
GAPVD1-207ENST00000394105 OVOS2A0A0G2JMS6 1433 aa9.69□□□□□ -0.86
GAPVD1-207ENST00000394105 NPHP4O75161 1426 aaPredicted RBP9.69□□□□□ -0.86
GAPVD1-207ENST00000394105 ANKRD45Q5TZF3 282 aa9.68□□□□□ -0.86
GAPVD1-207ENST00000394105 FTSJ3Q8IY81 847 aaKnown RBP9.68□□□□□ -0.86
GAPVD1-207ENST00000394105 MYH14Q7Z406 1995 aaKnown RBP9.68□□□□□ -0.86
GAPVD1-207ENST00000394105 SPEF2Q9C093 1822 aa9.68□□□□□ -0.86
GAPVD1-207ENST00000394105 STAG3Q9UJ98 1225 aa9.68□□□□□ -0.86
GAPVD1-207ENST00000394105 TAF1P21675 1872 aa9.68□□□□□ -0.86
GAPVD1-207ENST00000394105 NKX2-3Q8TAU0 364 aa9.68□□□□□ -0.86
GAPVD1-207ENST00000394105 IP6K1Q92551 441 aa9.68□□□□□ -0.86
GAPVD1-207ENST00000394105 PTPRCP08575 1304 aa9.67□□□□□ -0.86
GAPVD1-207ENST00000394105 RREB1Q92766 1687 aa9.67□□□□□ -0.86
GAPVD1-207ENST00000394105 JCADQ9P266 1359 aa9.67□□□□□ -0.86
GAPVD1-207ENST00000394105 XPCQ01831 940 aaPredicted RBP9.67□□□□□ -0.86
GAPVD1-207ENST00000394105 LMBRD1Q9NUN5 540 aa9.67□□□□□ -0.86
GAPVD1-207ENST00000394105 GCC1Q96CN9 775 aa9.67□□□□□ -0.86
GAPVD1-207ENST00000394105 GRPEL1Q9HAV7 217 aa9.67□□□□□ -0.86
GAPVD1-207ENST00000394105 FLIIQ13045 1269 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms