RNA–Protein interactions for RNA: ENST00000394104.6

GAPVD1-206, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2 BASIC

Gene GAPVD1, Length 6,737 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-206ENST00000394104 FERP16591 822 aa6.61□□□□□ -1.35
GAPVD1-206ENST00000394104 MRPS9P82933 396 aaKnown RBP6.61□□□□□ -1.35
GAPVD1-206ENST00000394104 PRPF4BQ13523 1007 aaKnown RBP6.61□□□□□ -1.35
GAPVD1-206ENST00000394104 SPTY2D1Q68D10 685 aaPredicted RBP6.61□□□□□ -1.35
GAPVD1-206ENST00000394104 CYB5RLQ6IPT4 315 aa6.61□□□□□ -1.35
GAPVD1-206ENST00000394104 TRMT1LQ7Z2T5 733 aaKnown RBP6.61□□□□□ -1.35
GAPVD1-206ENST00000394104 APBB1IPQ7Z5R6 666 aaPredicted RBP6.61□□□□□ -1.35
GAPVD1-206ENST00000394104 BTBD11A6QL63 1104 aa6.6□□□□□ -1.35
GAPVD1-206ENST00000394104 ZSCAN12O43309 604 aa6.6□□□□□ -1.35
GAPVD1-206ENST00000394104 TDRD12Q587J7 1177 aaKnown RBP6.6□□□□□ -1.35
GAPVD1-206ENST00000394104 SPATA24Q86W54 205 aa6.6□□□□□ -1.35
GAPVD1-206ENST00000394104 AIDAQ96BJ3 306 aa6.6□□□□□ -1.35
GAPVD1-206ENST00000394104 CCDC7Q96M83 1385 aa6.6□□□□□ -1.35
GAPVD1-206ENST00000394104 ATP2C2O75185 946 aa6.6□□□□□ -1.35
GAPVD1-206ENST00000394104 TOP1P11387 765 aaKnown RBP6.6□□□□□ -1.35
GAPVD1-206ENST00000394104 MCM3P25205 808 aa6.6□□□□□ -1.35
GAPVD1-206ENST00000394104 CA8P35219 290 aa6.6□□□□□ -1.35
GAPVD1-206ENST00000394104 HLTFQ14527 1009 aaKnown RBP eCLIP6.6□□□□□ -1.35
GAPVD1-206ENST00000394104 CTR9Q6PD62 1173 aa6.6□□□□□ -1.35
GAPVD1-206ENST00000394104 ABCF2Q9UG63 623 aa6.6□□□□□ -1.35
GAPVD1-206ENST00000394104 RAPGEF2Q9Y4G8 1499 aa6.6□□□□□ -1.35
GAPVD1-206ENST00000394104 WDR78Q5VTH9 848 aa6.6□□□□□ -1.35
GAPVD1-206ENST00000394104 MAATS1Q7Z4T9 603 aa6.6□□□□□ -1.35
GAPVD1-206ENST00000394104 CRACR2BQ8N4Y2 399 aaPredicted RBP6.6□□□□□ -1.35
GAPVD1-206ENST00000394104 ZSCAN31Q96LW9 406 aaPredicted RBP6.6□□□□□ -1.35
GAPVD1-206ENST00000394104 CTNNA3Q9UI47 895 aa6.6□□□□□ -1.35
GAPVD1-206ENST00000394104 CCDC175P0C221 793 aa6.6□□□□□ -1.35
GAPVD1-206ENST00000394104 PRKCSHP14314 528 aaPredicted RBP6.6□□□□□ -1.35
GAPVD1-206ENST00000394104 TERF1P54274 439 aa6.6□□□□□ -1.35
GAPVD1-206ENST00000394104 MMRN2Q9H8L6 949 aa6.6□□□□□ -1.35
GAPVD1-206ENST00000394104 PUF60Q9UHX1 559 aaKnown RBP6.6□□□□□ -1.35
GAPVD1-206ENST00000394104 PABPN1LA6NDY0 278 aaKnown RBP6.6□□□□□ -1.35
GAPVD1-206ENST00000394104 SRGAP3O43295 1099 aa6.6□□□□□ -1.35
GAPVD1-206ENST00000394104 CCDC96Q2M329 555 aa6.6□□□□□ -1.35
GAPVD1-206ENST00000394104 SPECC1Q5M775 1068 aa6.6□□□□□ -1.35
GAPVD1-206ENST00000394104 GIGYF2Q6Y7W6 1299 aaKnown RBP6.6□□□□□ -1.35
GAPVD1-206ENST00000394104 PAXIP1Q6ZW49 1069 aaPredicted RBP6.6□□□□□ -1.35
GAPVD1-206ENST00000394104 CLIP2Q9UDT6 1046 aa6.6□□□□□ -1.35
GAPVD1-206ENST00000394104 PPP6R1Q9UPN7 881 aa6.6□□□□□ -1.35
GAPVD1-206ENST00000394104 GTF2F1P35269 517 aaKnown RBP eCLIP6.59□□□□□ -1.35
GAPVD1-206ENST00000394104 IGHMBP2P38935 993 aaKnown RBP6.59□□□□□ -1.35
GAPVD1-206ENST00000394104 BMS1Q14692 1282 aaKnown RBP6.59□□□□□ -1.35
GAPVD1-206ENST00000394104 SULT6B1Q6IMI4 303 aa6.59□□□□□ -1.35
GAPVD1-206ENST00000394104 MKNK2Q9HBH9 465 aa6.59□□□□□ -1.35
GAPVD1-206ENST00000394104 TTLL12Q14166 644 aaPredicted RBP6.59□□□□□ -1.35
GAPVD1-206ENST00000394104 VPS36Q86VN1 386 aa6.59□□□□□ -1.35
GAPVD1-206ENST00000394104 SRCIN1Q9C0H9 1055 aa6.59□□□□□ -1.35
GAPVD1-206ENST00000394104 SPG7Q9UQ90 795 aa6.59□□□□□ -1.35
GAPVD1-206ENST00000394104 RRBP1Q9P2E9 1410 aaKnown RBP6.59□□□□□ -1.35
GAPVD1-206ENST00000394104 CCDC82Q8N4S0 544 aa6.59□□□□□ -1.35
GAPVD1-206ENST00000394104 JPH4Q96JJ6 628 aa6.59□□□□□ -1.35
GAPVD1-206ENST00000394104 TSNARE1Q96NA8 513 aa6.59□□□□□ -1.35
GAPVD1-206ENST00000394104 PAIP2Q9BPZ3 127 aaKnown RBP6.59□□□□□ -1.35
GAPVD1-206ENST00000394104 CGNQ9P2M7 1197 aaKnown RBP6.59□□□□□ -1.35
GAPVD1-206ENST00000394104 RRP9O43818 475 aaKnown RBP6.59□□□□□ -1.35
GAPVD1-206ENST00000394104 SFPQP23246 707 aaKnown RBP eCLIP6.59□□□□□ -1.35
GAPVD1-206ENST00000394104 FERMT3Q86UX7 667 aa6.59□□□□□ -1.35
GAPVD1-206ENST00000394104 ATAD2BQ9ULI0 1458 aa6.59□□□□□ -1.36
GAPVD1-206ENST00000394104 ZNF354CQ86Y25 554 aa6.59□□□□□ -1.36
GAPVD1-206ENST00000394104 AKNAQ7Z591 1439 aa6.59□□□□□ -1.36
GAPVD1-206ENST00000394104 USO1O60763 962 aaKnown RBP6.58□□□□□ -1.36
GAPVD1-206ENST00000394104 ZWINTO95229 277 aa6.58□□□□□ -1.36
GAPVD1-206ENST00000394104 PPP2R1AP30153 589 aa6.58□□□□□ -1.36
GAPVD1-206ENST00000394104 SLC4A8Q2Y0W8 1093 aa6.58□□□□□ -1.36
GAPVD1-206ENST00000394104 CUL5Q93034 780 aa6.58□□□□□ -1.36
GAPVD1-206ENST00000394104 CFAP57Q96MR6 1250 aa6.58□□□□□ -1.36
GAPVD1-206ENST00000394104 FAM107BQ9H098 131 aa6.58□□□□□ -1.36
GAPVD1-206ENST00000394104 TMOD2Q9NZR1 351 aa6.58□□□□□ -1.36
GAPVD1-206ENST00000394104 CCDC160A6NGH7 325 aa6.58□□□□□ -1.36
GAPVD1-206ENST00000394104 ARL1P40616 181 aaPredicted RBP6.58□□□□□ -1.36
GAPVD1-206ENST00000394104 PAFAH1B1P43034 410 aa6.58□□□□□ -1.36
GAPVD1-206ENST00000394104 METTL24Q5JXM2 366 aa6.58□□□□□ -1.36
GAPVD1-206ENST00000394104 ISM2Q6H9L7 571 aa6.58□□□□□ -1.36
GAPVD1-206ENST00000394104 KIF18AQ8NI77 898 aa6.58□□□□□ -1.36
GAPVD1-206ENST00000394104 PPP1R14CQ8TAE6 165 aa6.58□□□□□ -1.36
GAPVD1-206ENST00000394104 TAOK3Q9H2K8 898 aa6.58□□□□□ -1.36
GAPVD1-206ENST00000394104 RAD54L2Q9Y4B4 1467 aa6.58□□□□□ -1.36
GAPVD1-206ENST00000394104 SMARCA5O60264 1052 aaPredicted RBP6.58□□□□□ -1.36
GAPVD1-206ENST00000394104 NOP2P46087 812 aaKnown RBP6.58□□□□□ -1.36
GAPVD1-206ENST00000394104 PIP4K2BP78356 416 aa6.58□□□□□ -1.36
GAPVD1-206ENST00000394104 ZNF530Q6P9A1 599 aaPredicted RBP6.58□□□□□ -1.36
GAPVD1-206ENST00000394104 TOP2AP11388 1531 aaKnown RBP6.58□□□□□ -1.36
GAPVD1-206ENST00000394104 PRC1O43663 620 aa6.58□□□□□ -1.36
GAPVD1-206ENST00000394104 FGFR1OPO95684 399 aaKnown RBP6.58□□□□□ -1.36
GAPVD1-206ENST00000394104 KRT32Q14532 448 aa6.58□□□□□ -1.36
GAPVD1-206ENST00000394104 ANO10Q9NW15 660 aa6.58□□□□□ -1.36
GAPVD1-206ENST00000394104 ESPNB1AK53 854 aa6.58□□□□□ -1.36
GAPVD1-206ENST00000394104 SSRP1Q08945 709 aaKnown RBP6.58□□□□□ -1.36
GAPVD1-206ENST00000394104 A0A1W2PRG0 241 aa6.58□□□□□ -1.36
GAPVD1-206ENST00000394104 FSD2A1L4K1 749 aa6.58□□□□□ -1.36
GAPVD1-206ENST00000394104 MXRA7P84157 204 aa6.58□□□□□ -1.36
GAPVD1-206ENST00000394104 CCDC144CPQ8IYA2 1237 aa6.58□□□□□ -1.36
GAPVD1-206ENST00000394104 LARP6Q9BRS8 491 aaKnown RBP6.58□□□□□ -1.36
GAPVD1-206ENST00000394104 CEP126Q9P2H0 1117 aa6.58□□□□□ -1.36
GAPVD1-206ENST00000394104 SSX2IPQ9Y2D8 614 aa6.58□□□□□ -1.36
GAPVD1-206ENST00000394104 BRD4O60885 1362 aaPredicted RBP6.57□□□□□ -1.36
GAPVD1-206ENST00000394104 YEATS4O95619 227 aa6.57□□□□□ -1.36
GAPVD1-206ENST00000394104 XPCQ01831 940 aaPredicted RBP6.57□□□□□ -1.36
GAPVD1-206ENST00000394104 CCDC183Q5T5S1 534 aa6.57□□□□□ -1.36
GAPVD1-206ENST00000394104 C6orf163Q5TEZ5 329 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms