RNA–Protein interactions for RNA: ENST00000394092.6

SMAD1-202, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,658 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-202ENST00000394092 FOXO3O43524 673 aa8.95□□□□□ -0.98
SMAD1-202ENST00000394092 RBM25P49756 843 aaKnown RBP8.95□□□□□ -0.98
SMAD1-202ENST00000394092 PSME1Q06323 249 aa8.95□□□□□ -0.98
SMAD1-202ENST00000394092 KRT24Q2M2I5 525 aa8.95□□□□□ -0.98
SMAD1-202ENST00000394092 HSCBQ8IWL3 235 aa8.95□□□□□ -0.98
SMAD1-202ENST00000394092 SIRT2Q8IXJ6 389 aa8.95□□□□□ -0.98
SMAD1-202ENST00000394092 CLEC11AQ9Y240 323 aa8.95□□□□□ -0.98
SMAD1-202ENST00000394092 RGPD2P0DJD1 1756 aa8.95□□□□□ -0.98
SMAD1-202ENST00000394092 OVOS2A0A0G2JMS6 1433 aa8.95□□□□□ -0.98
SMAD1-202ENST00000394092 SPDYE2BA6NHP3 402 aa8.94□□□□□ -0.98
SMAD1-202ENST00000394092 CDC45O75419 566 aa8.94□□□□□ -0.98
SMAD1-202ENST00000394092 SPDYE6P0CI01 402 aa8.94□□□□□ -0.98
SMAD1-202ENST00000394092 SPDYE2Q495Y8 402 aa8.94□□□□□ -0.98
SMAD1-202ENST00000394092 ESCO1Q5FWF5 840 aa8.94□□□□□ -0.98
SMAD1-202ENST00000394092 NUTM2GQ5VZR2 741 aa8.94□□□□□ -0.98
SMAD1-202ENST00000394092 CEP85Q6P2H3 762 aa8.94□□□□□ -0.98
SMAD1-202ENST00000394092 TBC1D2Q9BYX2 928 aa8.94□□□□□ -0.98
SMAD1-202ENST00000394092 LMTK3Q96Q04 1460 aa8.94□□□□□ -0.98
SMAD1-202ENST00000394092 TAF7Q15545 349 aaPredicted RBP8.94□□□□□ -0.98
SMAD1-202ENST00000394092 SPDYE1Q8NFV5 336 aaPredicted RBP8.94□□□□□ -0.98
SMAD1-202ENST00000394092 GNAI3P08754 354 aa8.93□□□□□ -0.98
SMAD1-202ENST00000394092 HOXB7P09629 217 aa8.93□□□□□ -0.98
SMAD1-202ENST00000394092 CASC1Q6TDU7 716 aa8.93□□□□□ -0.98
SMAD1-202ENST00000394092 CEMIPQ8WUJ3 1361 aa8.93□□□□□ -0.98
SMAD1-202ENST00000394092 LTV1Q96GA3 475 aaPredicted RBP8.93□□□□□ -0.98
SMAD1-202ENST00000394092 MST1RQ04912 1400 aa8.92□□□□□ -0.98
SMAD1-202ENST00000394092 GNAI2P04899 355 aa8.92□□□□□ -0.98
SMAD1-202ENST00000394092 FLIIQ13045 1269 aa8.92□□□□□ -0.98
SMAD1-202ENST00000394092 AMOTQ4VCS5 1084 aa8.92□□□□□ -0.98
SMAD1-202ENST00000394092 SNX21Q969T3 373 aa8.92□□□□□ -0.98
SMAD1-202ENST00000394092 MEIS3Q99687 375 aa8.92□□□□□ -0.98
SMAD1-202ENST00000394092 SLKQ9H2G2 1235 aaPredicted RBP8.92□□□□□ -0.98
SMAD1-202ENST00000394092 MIS18AQ9NYP9 233 aa8.92□□□□□ -0.98
SMAD1-202ENST00000394092 ALS2Q96Q42 1657 aa8.92□□□□□ -0.98
SMAD1-202ENST00000394092 DCCP43146 1447 aa8.92□□□□□ -0.98
SMAD1-202ENST00000394092 FKBP5Q13451 457 aaPredicted RBP8.91□□□□□ -0.98
SMAD1-202ENST00000394092 TTC22Q5TAA0 569 aa8.91□□□□□ -0.98
SMAD1-202ENST00000394092 SLC4A10Q6U841 1118 aa8.91□□□□□ -0.98
SMAD1-202ENST00000394092 TBC1D9Q6ZT07 1266 aa8.91□□□□□ -0.98
SMAD1-202ENST00000394092 PLEKHM2Q8IWE5 1019 aa8.91□□□□□ -0.98
SMAD1-202ENST00000394092 ABCC6O95255 1503 aa8.91□□□□□ -0.98
SMAD1-202ENST00000394092 TUBGCP6Q96RT7 1819 aa8.91□□□□□ -0.98
SMAD1-202ENST00000394092 SIPA1L3O60292 1781 aaPredicted RBP8.91□□□□□ -0.98
SMAD1-202ENST00000394092 GSE1Q14687 1217 aa8.91□□□□□ -0.98
SMAD1-202ENST00000394092 PLEKHO1Q53GL0 409 aaPredicted RBP8.91□□□□□ -0.98
SMAD1-202ENST00000394092 AKAP4Q5JQC9 854 aa8.91□□□□□ -0.98
SMAD1-202ENST00000394092 IL17REQ8NFR9 667 aa8.91□□□□□ -0.98
SMAD1-202ENST00000394092 ANTXR1Q9H6X2 564 aa8.91□□□□□ -0.98
SMAD1-202ENST00000394092 CHMP5Q9NZZ3 219 aa8.91□□□□□ -0.98
SMAD1-202ENST00000394092 NCOA3Q9Y6Q9 1424 aa8.9□□□□□ -0.98
SMAD1-202ENST00000394092 PLEKHG2Q9H7P9 1386 aa8.9□□□□□ -0.98
SMAD1-202ENST00000394092 ADAMTS7Q9UKP4 1686 aa8.9□□□□□ -0.98
SMAD1-202ENST00000394092 FRAT2O75474 233 aaPredicted RBP8.9□□□□□ -0.98
SMAD1-202ENST00000394092 HDGFL1Q5TGJ6 251 aa8.9□□□□□ -0.98
SMAD1-202ENST00000394092 RGPD5Q99666 1765 aa8.9□□□□□ -0.99
SMAD1-202ENST00000394092 C1orf167Q5SNV9 1468 aa8.9□□□□□ -0.99
SMAD1-202ENST00000394092 TEFQ10587 303 aa8.89□□□□□ -0.99
SMAD1-202ENST00000394092 C1orf141Q5JVX7 400 aa8.89□□□□□ -0.99
SMAD1-202ENST00000394092 G2E3Q7L622 706 aa8.89□□□□□ -0.99
SMAD1-202ENST00000394092 USHBP1Q8N6Y0 703 aa8.89□□□□□ -0.99
SMAD1-202ENST00000394092 FOXD4L1Q9NU39 408 aa8.89□□□□□ -0.99
SMAD1-202ENST00000394092 AK9Q5TCS8 1911 aa8.89□□□□□ -0.99
SMAD1-202ENST00000394092 ZBTB7CA1YPR0 619 aa8.88□□□□□ -0.99
SMAD1-202ENST00000394092 F6X3S4 739 aa8.88□□□□□ -0.99
SMAD1-202ENST00000394092 GCP02774 474 aa8.88□□□□□ -0.99
SMAD1-202ENST00000394092 GSPT1P15170 499 aaKnown RBP8.88□□□□□ -0.99
SMAD1-202ENST00000394092 NBPF6Q5VWK0 638 aa8.88□□□□□ -0.99
SMAD1-202ENST00000394092 ZNF530Q6P9A1 599 aaPredicted RBP8.88□□□□□ -0.99
SMAD1-202ENST00000394092 ARHGEF25Q86VW2 580 aa8.88□□□□□ -0.99
SMAD1-202ENST00000394092 PROSER2Q86WR7 435 aaPredicted RBP8.88□□□□□ -0.99
SMAD1-202ENST00000394092 NBPF4Q96M43 638 aa8.88□□□□□ -0.99
SMAD1-202ENST00000394092 CIZ1Q9ULV3 898 aaPredicted RBP8.88□□□□□ -0.99
SMAD1-202ENST00000394092 HSP90AB1P08238 724 aaKnown RBP8.88□□□□□ -0.99
SMAD1-202ENST00000394092 OSBPL3Q9H4L5 887 aa8.88□□□□□ -0.99
SMAD1-202ENST00000394092 C19orf44Q9H6X5 657 aa8.88□□□□□ -0.99
SMAD1-202ENST00000394092 SCN11AQ9UI33 1791 aa8.87□□□□□ -0.99
SMAD1-202ENST00000394092 CRYBG1Q9Y4K1 1723 aa8.87□□□□□ -0.99
SMAD1-202ENST00000394092 REC8O95072 547 aa8.87□□□□□ -0.99
SMAD1-202ENST00000394092 UBTFL1P0CB47 393 aaPredicted RBP8.87□□□□□ -0.99
SMAD1-202ENST00000394092 EIF4A1P60842 406 aaKnown RBP8.87□□□□□ -0.99
SMAD1-202ENST00000394092 KRT28Q7Z3Y7 464 aa8.87□□□□□ -0.99
SMAD1-202ENST00000394092 ANKRD24Q8TF21 1146 aa8.87□□□□□ -0.99
SMAD1-202ENST00000394092 ORAI2Q96SN7 254 aa8.87□□□□□ -0.99
SMAD1-202ENST00000394092 LRRCC1Q9C099 1032 aa8.87□□□□□ -0.99
SMAD1-202ENST00000394092 SRCIN1Q9C0H9 1055 aa8.87□□□□□ -0.99
SMAD1-202ENST00000394092 PTMSP20962 102 aa8.86□□□□□ -0.99
SMAD1-202ENST00000394092 ATP8B2P98198 1209 aa8.86□□□□□ -0.99
SMAD1-202ENST00000394092 RABEP1Q15276 862 aa8.86□□□□□ -0.99
SMAD1-202ENST00000394092 RBM33Q96EV2 1170 aaKnown RBP8.86□□□□□ -0.99
SMAD1-202ENST00000394092 HDAC5Q9UQL6 1122 aa8.86□□□□□ -0.99
SMAD1-202ENST00000394092 IBTKQ9P2D0 1353 aaPredicted RBP8.86□□□□□ -0.99
SMAD1-202ENST00000394092 PXDNQ92626 1479 aa8.86□□□□□ -0.99
SMAD1-202ENST00000394092 AOX1Q06278 1338 aa8.86□□□□□ -0.99
SMAD1-202ENST00000394092 BTBD11A6QL63 1104 aa8.85□□□□□ -0.99
SMAD1-202ENST00000394092 DDX11L8A8MPP1 907 aa8.85□□□□□ -0.99
SMAD1-202ENST00000394092 K7ELQ4 463 aaPredicted RBP8.85□□□□□ -0.99
SMAD1-202ENST00000394092 RNMTO43148 476 aaKnown RBP8.85□□□□□ -0.99
SMAD1-202ENST00000394092 HSP90AA1P07900 732 aaKnown RBP8.85□□□□□ -0.99
SMAD1-202ENST00000394092 ATF3P18847 181 aa8.85□□□□□ -0.99
SMAD1-202ENST00000394092 LMOD2Q6P5Q4 547 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms