RNA–Protein interactions for RNA: ENST00000393758.6

PDZD4-202, Transcript of PDZ domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDZD4, Length 3,763 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD4-202ENST00000393758 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.33■□□□□ 0.68
PDZD4-202ENST00000393758 JAKMIP1Q96N16 626 aaKnown RBP19.32■□□□□ 0.68
PDZD4-202ENST00000393758 STK3Q13188 491 aa19.32■□□□□ 0.68
PDZD4-202ENST00000393758 CNTROBQ8N137 903 aa19.32■□□□□ 0.68
PDZD4-202ENST00000393758 ANXA1P04083 346 aa19.32■□□□□ 0.68
PDZD4-202ENST00000393758 IFIT2P09913 472 aaKnown RBP19.32■□□□□ 0.68
PDZD4-202ENST00000393758 HSP90B1P14625 803 aaKnown RBP19.32■□□□□ 0.68
PDZD4-202ENST00000393758 SLC26A8Q96RN1 970 aa19.32■□□□□ 0.68
PDZD4-202ENST00000393758 CHMLP26374 656 aa19.31■□□□□ 0.68
PDZD4-202ENST00000393758 SHROOM2Q13796 1616 aa19.31■□□□□ 0.68
PDZD4-202ENST00000393758 ZKSCAN1P17029 563 aaPredicted RBP19.31■□□□□ 0.68
PDZD4-202ENST00000393758 BICD2Q8TD16 824 aa19.31■□□□□ 0.68
PDZD4-202ENST00000393758 JARID2Q92833 1246 aaPredicted RBP19.3■□□□□ 0.68
PDZD4-202ENST00000393758 RTL1A6NKG5 1358 aa19.3■□□□□ 0.68
PDZD4-202ENST00000393758 USHBP1Q8N6Y0 703 aa19.3■□□□□ 0.68
PDZD4-202ENST00000393758 CEBPZQ03701 1054 aaKnown RBP19.3■□□□□ 0.68
PDZD4-202ENST00000393758 CCDC183Q5T5S1 534 aa19.3■□□□□ 0.68
PDZD4-202ENST00000393758 NCOA3Q9Y6Q9 1424 aa19.3■□□□□ 0.68
PDZD4-202ENST00000393758 ZNF853P0CG23 659 aa19.29■□□□□ 0.68
PDZD4-202ENST00000393758 HS1BP3Q53T59 392 aa19.29■□□□□ 0.68
PDZD4-202ENST00000393758 PRPF40BQ6NWY9 871 aaKnown RBP19.29■□□□□ 0.68
PDZD4-202ENST00000393758 TCEANC2Q96MN5 208 aa19.29■□□□□ 0.68
PDZD4-202ENST00000393758 MTHFSDQ2M296 383 aaKnown RBP19.29■□□□□ 0.68
PDZD4-202ENST00000393758 OSCARQ8IYS5 282 aa19.29■□□□□ 0.68
PDZD4-202ENST00000393758 CHD1O14646 1710 aa19.29■□□□□ 0.68
PDZD4-202ENST00000393758 QRICH2Q9H0J4 1663 aa19.29■□□□□ 0.68
PDZD4-202ENST00000393758 ZFYVE9O95405 1425 aa19.29■□□□□ 0.68
PDZD4-202ENST00000393758 UNC5CLQ8IV45 518 aa19.29■□□□□ 0.68
PDZD4-202ENST00000393758 AIMP1Q12904 312 aaKnown RBP19.28■□□□□ 0.68
PDZD4-202ENST00000393758 ZRSR1Q15695 479 aaKnown RBP19.28■□□□□ 0.68
PDZD4-202ENST00000393758 EFCAB6Q5THR3 1501 aa19.28■□□□□ 0.68
PDZD4-202ENST00000393758 SPDYE4A6NLX3 237 aa19.28■□□□□ 0.68
PDZD4-202ENST00000393758 CHL1O00533 1208 aa19.28■□□□□ 0.68
PDZD4-202ENST00000393758 DYNC1I1O14576 645 aa19.28■□□□□ 0.68
PDZD4-202ENST00000393758 STX6O43752 255 aa19.28■□□□□ 0.68
PDZD4-202ENST00000393758 BRPF1P55201 1214 aaPredicted RBP19.28■□□□□ 0.68
PDZD4-202ENST00000393758 NOLC1Q14978 699 aaKnown RBP eCLIP19.28■□□□□ 0.68
PDZD4-202ENST00000393758 PPP1R42Q7Z4L9 355 aa19.28■□□□□ 0.68
PDZD4-202ENST00000393758 CKAP2LQ8IYA6 745 aa19.28■□□□□ 0.68
PDZD4-202ENST00000393758 NECAB1Q8N987 351 aa19.28■□□□□ 0.68
PDZD4-202ENST00000393758 GPATCH3Q96I76 525 aa19.28■□□□□ 0.68
PDZD4-202ENST00000393758 SRCIN1Q9C0H9 1055 aa19.28■□□□□ 0.68
PDZD4-202ENST00000393758 RUFY2Q8WXA3 655 aa19.28■□□□□ 0.68
PDZD4-202ENST00000393758 TRIM5Q9C035 493 aa19.28■□□□□ 0.68
PDZD4-202ENST00000393758 TULP4Q9NRJ4 1543 aa19.28■□□□□ 0.68
PDZD4-202ENST00000393758 CLASRPQ8N2M8 674 aaKnown RBP19.27■□□□□ 0.68
PDZD4-202ENST00000393758 BRD1O95696 1058 aa19.27■□□□□ 0.68
PDZD4-202ENST00000393758 MTERF4Q7Z6M4 381 aaKnown RBP19.27■□□□□ 0.68
PDZD4-202ENST00000393758 FAM69CQ0P6D2 419 aa19.27■□□□□ 0.67
PDZD4-202ENST00000393758 TEFQ10587 303 aa19.27■□□□□ 0.67
PDZD4-202ENST00000393758 LARP1BQ659C4 914 aaKnown RBP19.27■□□□□ 0.67
PDZD4-202ENST00000393758 KIF3AQ9Y496 699 aa19.27■□□□□ 0.67
PDZD4-202ENST00000393758 HMGN5P82970 282 aaKnown RBP19.26■□□□□ 0.67
PDZD4-202ENST00000393758 PDRG1Q9NUG6 133 aa19.26■□□□□ 0.67
PDZD4-202ENST00000393758 MCM5P33992 734 aa19.26■□□□□ 0.67
PDZD4-202ENST00000393758 DNM1Q05193 864 aaKnown RBP19.26■□□□□ 0.67
PDZD4-202ENST00000393758 SIL1Q9H173 461 aa19.26■□□□□ 0.67
PDZD4-202ENST00000393758 TFIP11Q9UBB9 837 aaKnown RBP19.26■□□□□ 0.67
PDZD4-202ENST00000393758 FAM184AQ8NB25 1140 aa19.26■□□□□ 0.67
PDZD4-202ENST00000393758 POGZQ7Z3K3 1410 aa19.25■□□□□ 0.67
PDZD4-202ENST00000393758 ACEP12821 1306 aa19.25■□□□□ 0.67
PDZD4-202ENST00000393758 ZNF500O60304 480 aaPredicted RBP19.25■□□□□ 0.67
PDZD4-202ENST00000393758 FAM135BQ49AJ0 1406 aa19.25■□□□□ 0.67
PDZD4-202ENST00000393758 H3BQV1 296 aa19.24■□□□□ 0.67
PDZD4-202ENST00000393758 GJB2P29033 226 aa19.24■□□□□ 0.67
PDZD4-202ENST00000393758 AK2P54819 239 aa19.24■□□□□ 0.67
PDZD4-202ENST00000393758 IFFO2Q5TF58 517 aa19.24■□□□□ 0.67
PDZD4-202ENST00000393758 LIMCH1Q9UPQ0 1083 aa19.24■□□□□ 0.67
PDZD4-202ENST00000393758 CYP46A1Q9Y6A2 500 aa19.24■□□□□ 0.67
PDZD4-202ENST00000393758 TAF7Q15545 349 aaPredicted RBP19.24■□□□□ 0.67
PDZD4-202ENST00000393758 IGSF3O75054 1194 aa19.24■□□□□ 0.67
PDZD4-202ENST00000393758 FAM173BQ6P4H8 233 aa19.24■□□□□ 0.67
PDZD4-202ENST00000393758 ZSCAN22P10073 491 aaPredicted RBP19.23■□□□□ 0.67
PDZD4-202ENST00000393758 PTCH1Q13635 1447 aa19.23■□□□□ 0.67
PDZD4-202ENST00000393758 CCDC192P0DO97 292 aa19.23■□□□□ 0.67
PDZD4-202ENST00000393758 ATP8B2P98198 1209 aa19.23■□□□□ 0.67
PDZD4-202ENST00000393758 NPHP1O15259 732 aa19.23■□□□□ 0.67
PDZD4-202ENST00000393758 SYT1P21579 422 aa19.23■□□□□ 0.67
PDZD4-202ENST00000393758 PHAXQ9H814 394 aaKnown RBP19.22■□□□□ 0.67
PDZD4-202ENST00000393758 PPFIA3O75145 1194 aa19.22■□□□□ 0.67
PDZD4-202ENST00000393758 PPP4R3BQ5MIZ7 849 aa19.22■□□□□ 0.67
PDZD4-202ENST00000393758 LRRC7Q96NW7 1537 aa19.22■□□□□ 0.67
PDZD4-202ENST00000393758 LETM1O95202 739 aaPredicted RBP19.22■□□□□ 0.67
PDZD4-202ENST00000393758 CYP2E1P05181 493 aaPredicted RBP19.22■□□□□ 0.67
PDZD4-202ENST00000393758 GOLGA6L19H0YKK7 550 aa19.21■□□□□ 0.67
PDZD4-202ENST00000393758 RHPN1Q8TCX5 695 aa19.21■□□□□ 0.67
PDZD4-202ENST00000393758 IBTKQ9P2D0 1353 aaPredicted RBP19.21■□□□□ 0.67
PDZD4-202ENST00000393758 FSD1Q9BTV5 496 aa19.21■□□□□ 0.67
PDZD4-202ENST00000393758 TTC21BQ7Z4L5 1316 aa19.21■□□□□ 0.67
PDZD4-202ENST00000393758 GLI2P10070 1586 aa19.21■□□□□ 0.67
PDZD4-202ENST00000393758 GNAT3A8MTJ3 354 aa19.21■□□□□ 0.67
PDZD4-202ENST00000393758 UBE2HP62256 183 aa19.21■□□□□ 0.67
PDZD4-202ENST00000393758 SHPRHQ149N8 1683 aa19.21■□□□□ 0.67
PDZD4-202ENST00000393758 TNMDQ9H2S6 317 aa19.2■□□□□ 0.66
PDZD4-202ENST00000393758 BECN2A8MW95 431 aa19.2■□□□□ 0.66
PDZD4-202ENST00000393758 AACSQ86V21 672 aa19.2■□□□□ 0.66
PDZD4-202ENST00000393758 KIF1BPQ96EK5 621 aa19.2■□□□□ 0.66
PDZD4-202ENST00000393758 C16orf45Q96MC5 204 aaPredicted RBP19.2■□□□□ 0.66
PDZD4-202ENST00000393758 A0A0U1RQG5 324 aaPredicted RBP19.2■□□□□ 0.66
PDZD4-202ENST00000393758 CLEC17AQ6ZS10 378 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms