RNA–Protein interactions for RNA: ENST00000393559.1

LAMB1-202, Transcript of laminin subunit beta 1, humanhuman

TSL 2

Gene LAMB1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMB1-202ENST00000393559 SALL2Q9Y467 1007 aaPredicted RBP18.12■□□□□ 0.49
LAMB1-202ENST00000393559 IGSF1Q8N6C5 1336 aa18.12■□□□□ 0.49
LAMB1-202ENST00000393559 SULT6B1Q6IMI4 303 aa18.11■□□□□ 0.49
LAMB1-202ENST00000393559 PLEKHF1Q96S99 279 aa18.11■□□□□ 0.49
LAMB1-202ENST00000393559 MAPK8IP3Q9UPT6 1336 aa18.11■□□□□ 0.49
LAMB1-202ENST00000393559 GIGYF1O75420 1035 aaPredicted RBP18.1■□□□□ 0.49
LAMB1-202ENST00000393559 YBX3P16989 372 aaKnown RBP eCLIP18.09■□□□□ 0.49
LAMB1-202ENST00000393559 FAM208AQ9UK61 1670 aaKnown RBP18.09■□□□□ 0.49
LAMB1-202ENST00000393559 KDRP35968 1356 aa18.08■□□□□ 0.49
LAMB1-202ENST00000393559 PCDH11XQ9BZA7 1347 aa18.08■□□□□ 0.49
LAMB1-202ENST00000393559 PCDH11YQ9BZA8 1340 aa18.08■□□□□ 0.49
LAMB1-202ENST00000393559 GRIN3BO60391 1043 aa18.08■□□□□ 0.48
LAMB1-202ENST00000393559 NEFMP07197 916 aa18.08■□□□□ 0.48
LAMB1-202ENST00000393559 DOT1LQ8TEK3 1739 aa18.08■□□□□ 0.48
LAMB1-202ENST00000393559 RRP7AQ9Y3A4 280 aaKnown RBP18.07■□□□□ 0.48
LAMB1-202ENST00000393559 PALLDQ8WX93 1383 aa18.06■□□□□ 0.48
LAMB1-202ENST00000393559 CYP27B1O15528 508 aa18.05■□□□□ 0.48
LAMB1-202ENST00000393559 NGEFQ8N5V2 710 aa18.05■□□□□ 0.48
LAMB1-202ENST00000393559 FLAD1Q8NFF5 587 aa18.05■□□□□ 0.48
LAMB1-202ENST00000393559 PHACTR3Q96KR7 559 aa18.05■□□□□ 0.48
LAMB1-202ENST00000393559 RGPD2P0DJD1 1756 aa18.04■□□□□ 0.48
LAMB1-202ENST00000393559 PHF14O94880 888 aa18.04■□□□□ 0.48
LAMB1-202ENST00000393559 TMPOP42166 694 aaKnown RBP18.04■□□□□ 0.48
LAMB1-202ENST00000393559 NEUROD2Q15784 382 aa18.04■□□□□ 0.48
LAMB1-202ENST00000393559 SMIM5Q71RC9 77 aa18.04■□□□□ 0.48
LAMB1-202ENST00000393559 AK7Q96M32 723 aa18.04■□□□□ 0.48
LAMB1-202ENST00000393559 NCAPD2Q15021 1401 aa18.04■□□□□ 0.48
LAMB1-202ENST00000393559 HMGB2P26583 209 aaKnown RBP18.03■□□□□ 0.48
LAMB1-202ENST00000393559 SMARCC1Q92922 1105 aaPredicted RBP18.03■□□□□ 0.48
LAMB1-202ENST00000393559 CHD4Q14839 1912 aa18.03■□□□□ 0.48
LAMB1-202ENST00000393559 NFE2L2Q16236 605 aa18.02■□□□□ 0.48
LAMB1-202ENST00000393559 PIGBQ92521 554 aa18.02■□□□□ 0.48
LAMB1-202ENST00000393559 ZNF521Q96K83 1311 aa18.01■□□□□ 0.47
LAMB1-202ENST00000393559 LY75O60449 1722 aa18.01■□□□□ 0.47
LAMB1-202ENST00000393559 QSER1Q2KHR3 1735 aa18.01■□□□□ 0.47
LAMB1-202ENST00000393559 NCBP3Q53F19 620 aaKnown RBP18.01■□□□□ 0.47
LAMB1-202ENST00000393559 WWC3Q9ULE0 1092 aa18.01■□□□□ 0.47
LAMB1-202ENST00000393559 CD2APQ9Y5K6 639 aa18.01■□□□□ 0.47
LAMB1-202ENST00000393559 SHANK3Q9BYB0 1731 aa18.01■□□□□ 0.47
LAMB1-202ENST00000393559 RIPK4P57078 832 aa18■□□□□ 0.47
LAMB1-202ENST00000393559 SPG7Q9UQ90 795 aa18■□□□□ 0.47
LAMB1-202ENST00000393559 TUBGCP6Q96RT7 1819 aa18■□□□□ 0.47
LAMB1-202ENST00000393559 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.99■□□□□ 0.47
LAMB1-202ENST00000393559 CCDC27Q2M243 656 aa17.99■□□□□ 0.47
LAMB1-202ENST00000393559 AMIGO3Q86WK7 504 aa17.99■□□□□ 0.47
LAMB1-202ENST00000393559 CEP350Q5VT06 3117 aa17.99■□□□□ 0.47
LAMB1-202ENST00000393559 WWC1Q8IX03 1113 aa17.98■□□□□ 0.47
LAMB1-202ENST00000393559 ZNF526Q8TF50 670 aaPredicted RBP17.98■□□□□ 0.47
LAMB1-202ENST00000393559 TMOD3Q9NYL9 352 aa17.97■□□□□ 0.47
LAMB1-202ENST00000393559 TRIM35Q9UPQ4 493 aa17.97■□□□□ 0.47
LAMB1-202ENST00000393559 COL24A1Q17RW2 1714 aa17.96■□□□□ 0.47
LAMB1-202ENST00000393559 LOC102724428A0A0B4J2F2 783 aa17.96■□□□□ 0.47
LAMB1-202ENST00000393559 SIK1P57059 783 aa17.96■□□□□ 0.47
LAMB1-202ENST00000393559 GOLGA2Q08379 1002 aa17.96■□□□□ 0.47
LAMB1-202ENST00000393559 MTHFSDQ2M296 383 aaKnown RBP17.96■□□□□ 0.47
LAMB1-202ENST00000393559 GAS2L2Q8NHY3 880 aa17.96■□□□□ 0.47
LAMB1-202ENST00000393559 CDCA7LQ96GN5 454 aa17.96■□□□□ 0.47
LAMB1-202ENST00000393559 NKX1-1Q15270 411 aaPredicted RBP17.95■□□□□ 0.46
LAMB1-202ENST00000393559 LINC00116Q8NCU8 138 aa17.95■□□□□ 0.46
LAMB1-202ENST00000393559 GPBP1L1Q9HC44 474 aaPredicted RBP17.95■□□□□ 0.46
LAMB1-202ENST00000393559 ASAP1Q9ULH1 1129 aa17.95■□□□□ 0.46
LAMB1-202ENST00000393559 ATP10DQ9P241 1426 aa17.95■□□□□ 0.46
LAMB1-202ENST00000393559 GNPATO15228 680 aa17.94■□□□□ 0.46
LAMB1-202ENST00000393559 ATP6V1AP38606 617 aa17.94■□□□□ 0.46
LAMB1-202ENST00000393559 LMOD3Q0VAK6 560 aa17.94■□□□□ 0.46
LAMB1-202ENST00000393559 WDR63Q8IWG1 891 aa17.94■□□□□ 0.46
LAMB1-202ENST00000393559 C5P01031 1676 aa17.93■□□□□ 0.46
LAMB1-202ENST00000393559 SSFA2P28290 1259 aa17.93■□□□□ 0.46
LAMB1-202ENST00000393559 PLEKHO1Q53GL0 409 aaPredicted RBP17.93■□□□□ 0.46
LAMB1-202ENST00000393559 IFNL2Q8IZJ0 200 aa17.93■□□□□ 0.46
LAMB1-202ENST00000393559 PHKG2P15735 406 aa17.92■□□□□ 0.46
LAMB1-202ENST00000393559 ITPK1Q13572 414 aa17.92■□□□□ 0.46
LAMB1-202ENST00000393559 AMOTQ4VCS5 1084 aa17.92■□□□□ 0.46
LAMB1-202ENST00000393559 DLG5Q8TDM6 1919 aa17.92■□□□□ 0.46
LAMB1-202ENST00000393559 SLFN5Q08AF3 891 aa17.91■□□□□ 0.46
LAMB1-202ENST00000393559 SPINK5Q9NQ38 1064 aaPredicted RBP17.91■□□□□ 0.46
LAMB1-202ENST00000393559 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.91■□□□□ 0.46
LAMB1-202ENST00000393559 PLEKHG2Q9H7P9 1386 aa17.91■□□□□ 0.46
LAMB1-202ENST00000393559 E9PSI1 815 aa17.9■□□□□ 0.46
LAMB1-202ENST00000393559 ZNF530Q6P9A1 599 aaPredicted RBP17.9■□□□□ 0.46
LAMB1-202ENST00000393559 ATG3Q9NT62 314 aa17.9■□□□□ 0.46
LAMB1-202ENST00000393559 C4BP0C0L5 1744 aa17.89■□□□□ 0.46
LAMB1-202ENST00000393559 DCTN1Q14203 1278 aa17.89■□□□□ 0.45
LAMB1-202ENST00000393559 THUMPD2Q9BTF0 503 aaKnown RBP17.89■□□□□ 0.45
LAMB1-202ENST00000393559 GNAT3A8MTJ3 354 aa17.88■□□□□ 0.45
LAMB1-202ENST00000393559 MMP10P09238 476 aa17.88■□□□□ 0.45
LAMB1-202ENST00000393559 RTF1Q92541 710 aaKnown RBP17.88■□□□□ 0.45
LAMB1-202ENST00000393559 RBM42Q9BTD8 480 aaKnown RBP17.88■□□□□ 0.45
LAMB1-202ENST00000393559 IL16Q14005 1332 aa17.88■□□□□ 0.45
LAMB1-202ENST00000393559 TOGARAM1Q9Y4F4 1720 aa17.87■□□□□ 0.45
LAMB1-202ENST00000393559 HTATSF1O43719 755 aaKnown RBP17.87■□□□□ 0.45
LAMB1-202ENST00000393559 CALD1Q05682 793 aaKnown RBP17.87■□□□□ 0.45
LAMB1-202ENST00000393559 TRAPPC3LQ5T215 181 aa17.87■□□□□ 0.45
LAMB1-202ENST00000393559 DUSP27Q5VZP5 1158 aa17.87■□□□□ 0.45
LAMB1-202ENST00000393559 MCM10Q7L590 875 aa17.87■□□□□ 0.45
LAMB1-202ENST00000393559 AKAP4Q5JQC9 854 aa17.86■□□□□ 0.45
LAMB1-202ENST00000393559 C1orf141Q5JVX7 400 aa17.86■□□□□ 0.45
LAMB1-202ENST00000393559 TRMT2AQ8IZ69 625 aaKnown RBP17.86■□□□□ 0.45
LAMB1-202ENST00000393559 RTCBQ9Y3I0 505 aaKnown RBP17.86■□□□□ 0.45
LAMB1-202ENST00000393559 PKD1L3Q7Z443 1732 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms