RNA–Protein interactions for RNA: ENST00000393164.6

ATP2B1-203, Transcript of ATPase plasma membrane Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2B1, Length 3,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B1-203ENST00000393164 THUMPD2Q9BTF0 503 aaKnown RBP4.56□□□□□ -1.68
ATP2B1-203ENST00000393164 LGR6Q9HBX8 967 aa4.56□□□□□ -1.68
ATP2B1-203ENST00000393164 GLI3P10071 1580 aa4.56□□□□□ -1.68
ATP2B1-203ENST00000393164 HOXB7P09629 217 aa4.56□□□□□ -1.68
ATP2B1-203ENST00000393164 FMNL2Q96PY5 1086 aa4.56□□□□□ -1.68
ATP2B1-203ENST00000393164 TEX13AQ9BXU3 409 aaPredicted RBP4.56□□□□□ -1.68
ATP2B1-203ENST00000393164 FANCIQ9NVI1 1328 aa4.55□□□□□ -1.68
ATP2B1-203ENST00000393164 ZNF853P0CG23 659 aa4.55□□□□□ -1.68
ATP2B1-203ENST00000393164 PRIM1P49642 420 aaKnown RBP4.55□□□□□ -1.68
ATP2B1-203ENST00000393164 SF3B2Q13435 895 aaKnown RBP4.55□□□□□ -1.68
ATP2B1-203ENST00000393164 ZNF790Q6PG37 636 aa4.55□□□□□ -1.68
ATP2B1-203ENST00000393164 POTEAQ6S8J7 498 aa4.55□□□□□ -1.68
ATP2B1-203ENST00000393164 NPM2Q86SE8 214 aaKnown RBP4.55□□□□□ -1.68
ATP2B1-203ENST00000393164 MBIPQ9NS73 344 aa4.55□□□□□ -1.68
ATP2B1-203ENST00000393164 THSD7AQ9UPZ6 1657 aa4.55□□□□□ -1.68
ATP2B1-203ENST00000393164 KDM6AO15550 1401 aaPredicted RBP4.55□□□□□ -1.68
ATP2B1-203ENST00000393164 LRRC37A3O60309 1634 aa4.55□□□□□ -1.68
ATP2B1-203ENST00000393164 WNK3Q9BYP7 1800 aa4.55□□□□□ -1.68
ATP2B1-203ENST00000393164 GOLGA6L2Q8N9W4 650 aaPredicted RBP4.55□□□□□ -1.68
ATP2B1-203ENST00000393164 RGS17Q9UGC6 210 aaPredicted RBP4.55□□□□□ -1.68
ATP2B1-203ENST00000393164 SNRPA1P09661 255 aaKnown RBP4.55□□□□□ -1.68
ATP2B1-203ENST00000393164 DUSP27Q5VZP5 1158 aa4.55□□□□□ -1.68
ATP2B1-203ENST00000393164 STK31Q9BXU1 1019 aa4.55□□□□□ -1.68
ATP2B1-203ENST00000393164 BCL11BQ9C0K0 894 aaPredicted RBP4.55□□□□□ -1.68
ATP2B1-203ENST00000393164 MRC1P22897 1456 aa4.54□□□□□ -1.68
ATP2B1-203ENST00000393164 TWISTNBQ3B726 338 aaPredicted RBP4.54□□□□□ -1.68
ATP2B1-203ENST00000393164 TRMT2AQ8IZ69 625 aaKnown RBP4.54□□□□□ -1.68
ATP2B1-203ENST00000393164 VSIG10Q8N0Z9 540 aa4.54□□□□□ -1.68
ATP2B1-203ENST00000393164 TSR2Q969E8 191 aaKnown RBP4.54□□□□□ -1.68
ATP2B1-203ENST00000393164 CDCA7LQ96GN5 454 aa4.54□□□□□ -1.68
ATP2B1-203ENST00000393164 ACSBG1Q96GR2 724 aa4.54□□□□□ -1.68
ATP2B1-203ENST00000393164 RGS12O14924 1447 aa4.54□□□□□ -1.68
ATP2B1-203ENST00000393164 STARD3NLO95772 234 aa4.54□□□□□ -1.68
ATP2B1-203ENST00000393164 EXOSC9Q06265 439 aaKnown RBP4.54□□□□□ -1.68
ATP2B1-203ENST00000393164 CCDC30Q5VVM6 783 aa4.54□□□□□ -1.68
ATP2B1-203ENST00000393164 PIGBQ92521 554 aa4.54□□□□□ -1.68
ATP2B1-203ENST00000393164 MS4A1P11836 297 aa4.53□□□□□ -1.68
ATP2B1-203ENST00000393164 CANXP27824 592 aaKnown RBP4.53□□□□□ -1.68
ATP2B1-203ENST00000393164 EIF4A1P60842 406 aaKnown RBP4.53□□□□□ -1.68
ATP2B1-203ENST00000393164 ALDH1L2Q3SY69 923 aa4.53□□□□□ -1.68
ATP2B1-203ENST00000393164 CCDC125Q86Z20 511 aa4.53□□□□□ -1.68
ATP2B1-203ENST00000393164 RBM42Q9BTD8 480 aaKnown RBP4.53□□□□□ -1.68
ATP2B1-203ENST00000393164 MIS18AQ9NYP9 233 aa4.53□□□□□ -1.68
ATP2B1-203ENST00000393164 DLG5Q8TDM6 1919 aa4.53□□□□□ -1.68
ATP2B1-203ENST00000393164 IPO8O15397 1037 aaKnown RBP4.53□□□□□ -1.68
ATP2B1-203ENST00000393164 PTCD1O75127 700 aaKnown RBP4.53□□□□□ -1.68
ATP2B1-203ENST00000393164 SLC39A6Q13433 755 aa4.53□□□□□ -1.68
ATP2B1-203ENST00000393164 HDGFL1Q5TGJ6 251 aa4.53□□□□□ -1.68
ATP2B1-203ENST00000393164 RCAN3Q9UKA8 241 aa4.53□□□□□ -1.68
ATP2B1-203ENST00000393164 ADAMTS7Q9UKP4 1686 aa4.53□□□□□ -1.68
ATP2B1-203ENST00000393164 SCN11AQ9UI33 1791 aa4.53□□□□□ -1.68
ATP2B1-203ENST00000393164 ERBB4Q15303 1308 aa4.53□□□□□ -1.68
ATP2B1-203ENST00000393164 KIF16BQ96L93 1317 aa4.53□□□□□ -1.68
ATP2B1-203ENST00000393164 KAT6BQ8WYB5 2073 aa4.53□□□□□ -1.69
ATP2B1-203ENST00000393164 PALLDQ8WX93 1383 aa4.52□□□□□ -1.69
ATP2B1-203ENST00000393164 HEG1Q9ULI3 1381 aa4.52□□□□□ -1.69
ATP2B1-203ENST00000393164 ZNF496Q96IT1 587 aaPredicted RBP4.52□□□□□ -1.69
ATP2B1-203ENST00000393164 SPINK5Q9NQ38 1064 aaPredicted RBP4.52□□□□□ -1.69
ATP2B1-203ENST00000393164 ATG3Q9NT62 314 aa4.52□□□□□ -1.69
ATP2B1-203ENST00000393164 LOC102724428A0A0B4J2F2 783 aa4.52□□□□□ -1.69
ATP2B1-203ENST00000393164 ELL2O00472 640 aaPredicted RBP4.52□□□□□ -1.69
ATP2B1-203ENST00000393164 GIGYF1O75420 1035 aaPredicted RBP4.52□□□□□ -1.69
ATP2B1-203ENST00000393164 TRIM37O94972 964 aa4.52□□□□□ -1.69
ATP2B1-203ENST00000393164 NEFLP07196 543 aa4.52□□□□□ -1.69
ATP2B1-203ENST00000393164 ATP6V1AP38606 617 aa4.52□□□□□ -1.69
ATP2B1-203ENST00000393164 BAG6P46379 1132 aa4.52□□□□□ -1.69
ATP2B1-203ENST00000393164 SIK1P57059 783 aa4.52□□□□□ -1.69
ATP2B1-203ENST00000393164 SLC27A3Q5K4L6 730 aa4.52□□□□□ -1.69
ATP2B1-203ENST00000393164 SMC4Q9NTJ3 1288 aa4.52□□□□□ -1.69
ATP2B1-203ENST00000393164 DBF4Q9UBU7 674 aaPredicted RBP4.52□□□□□ -1.69
ATP2B1-203ENST00000393164 ASAP1Q9ULH1 1129 aa4.52□□□□□ -1.69
ATP2B1-203ENST00000393164 SHANK3Q9BYB0 1731 aa4.52□□□□□ -1.69
ATP2B1-203ENST00000393164 DDX58O95786 925 aaKnown RBP4.52□□□□□ -1.69
ATP2B1-203ENST00000393164 EIF2S2P20042 333 aaKnown RBP4.52□□□□□ -1.69
ATP2B1-203ENST00000393164 FAM182BQ5T319 152 aa4.52□□□□□ -1.69
ATP2B1-203ENST00000393164 C8orf58Q8NAV2 365 aa4.52□□□□□ -1.69
ATP2B1-203ENST00000393164 PLSCR1O15162 318 aa4.51□□□□□ -1.69
ATP2B1-203ENST00000393164 KCNQ2O43526 872 aa4.51□□□□□ -1.69
ATP2B1-203ENST00000393164 VAMP4O75379 141 aa4.51□□□□□ -1.69
ATP2B1-203ENST00000393164 APBA3O96018 575 aa4.51□□□□□ -1.69
ATP2B1-203ENST00000393164 HYPKQ9NX55 129 aa4.51□□□□□ -1.69
ATP2B1-203ENST00000393164 CCNL1Q9UK58 526 aaPredicted RBP4.51□□□□□ -1.69
ATP2B1-203ENST00000393164 RARSP54136 660 aaKnown RBP4.51□□□□□ -1.69
ATP2B1-203ENST00000393164 CHMP4BQ9H444 224 aaKnown RBP4.51□□□□□ -1.69
ATP2B1-203ENST00000393164 DOT1LQ8TEK3 1739 aa4.51□□□□□ -1.69
ATP2B1-203ENST00000393164 KCNQ3O43525 872 aa4.5□□□□□ -1.69
ATP2B1-203ENST00000393164 BRPF1P55201 1214 aaPredicted RBP4.5□□□□□ -1.69
ATP2B1-203ENST00000393164 API5Q9BZZ5 524 aaKnown RBP4.5□□□□□ -1.69
ATP2B1-203ENST00000393164 DDX21Q9NR30 783 aaKnown RBP eCLIP4.5□□□□□ -1.69
ATP2B1-203ENST00000393164 NHSQ6T4R5 1651 aa4.5□□□□□ -1.69
ATP2B1-203ENST00000393164 PTPRCP08575 1304 aa4.5□□□□□ -1.69
ATP2B1-203ENST00000393164 A0A087WZG4 1122 aa4.5□□□□□ -1.69
ATP2B1-203ENST00000393164 SLC4A2P04920 1241 aa4.5□□□□□ -1.69
ATP2B1-203ENST00000393164 IFFO2Q5TF58 517 aa4.5□□□□□ -1.69
ATP2B1-203ENST00000393164 ZKSCAN2Q63HK3 967 aa4.5□□□□□ -1.69
ATP2B1-203ENST00000393164 FTSJ3Q8IY81 847 aaKnown RBP4.5□□□□□ -1.69
ATP2B1-203ENST00000393164 TSPYL6Q8N831 410 aa4.5□□□□□ -1.69
ATP2B1-203ENST00000393164 ARHGAP45Q92619 1136 aa4.5□□□□□ -1.69
ATP2B1-203ENST00000393164 RC3H1Q5TC82 1133 aaKnown RBP4.5□□□□□ -1.69
ATP2B1-203ENST00000393164 KIF6Q6ZMV9 814 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms