RNA–Protein interactions for RNA: ENST00000390468.1

TRAV41-201, Transcript of T cell receptor alpha variable 41, humanhuman

APPRIS P1 BASIC

Gene TRAV41, Length 336 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV41-201ENST00000390468 KCTD15Q96SI1 283 aaPredicted RBP3.68□□□□□ -1.82
TRAV41-201ENST00000390468 MAP4K5Q9Y4K4 846 aa3.68□□□□□ -1.82
TRAV41-201ENST00000390468 PREX2Q70Z35 1606 aa3.68□□□□□ -1.82
TRAV41-201ENST00000390468 MAGI3Q5TCQ9 1506 aa3.68□□□□□ -1.82
TRAV41-201ENST00000390468 ABCC2Q92887 1545 aa3.68□□□□□ -1.82
TRAV41-201ENST00000390468 PRG4Q92954 1404 aaPredicted RBP3.68□□□□□ -1.82
TRAV41-201ENST00000390468 NUP153P49790 1475 aaKnown RBP3.67□□□□□ -1.82
TRAV41-201ENST00000390468 TSPOAP1O95153 1857 aa3.67□□□□□ -1.82
TRAV41-201ENST00000390468 MTUS2Q5JR59 1369 aa3.67□□□□□ -1.82
TRAV41-201ENST00000390468 SPINT1O43278 529 aa3.67□□□□□ -1.82
TRAV41-201ENST00000390468 MAP3K10Q02779 954 aa3.67□□□□□ -1.82
TRAV41-201ENST00000390468 CTDSPL2Q05D32 466 aa3.67□□□□□ -1.82
TRAV41-201ENST00000390468 ZBTB33Q86T24 672 aa3.67□□□□□ -1.82
TRAV41-201ENST00000390468 TRMT44Q8IYL2 757 aaKnown RBP3.67□□□□□ -1.82
TRAV41-201ENST00000390468 NCOA2Q15596 1464 aa3.67□□□□□ -1.82
TRAV41-201ENST00000390468 PLB1Q6P1J6 1458 aa3.67□□□□□ -1.82
TRAV41-201ENST00000390468 RIMBP3CA6NJZ7 1639 aa3.66□□□□□ -1.82
TRAV41-201ENST00000390468 RIMBP3BA6NNM3 1639 aa3.66□□□□□ -1.82
TRAV41-201ENST00000390468 RIMBP3Q9UFD9 1639 aa3.66□□□□□ -1.82
TRAV41-201ENST00000390468 ARHGEF11O15085 1522 aa3.66□□□□□ -1.82
TRAV41-201ENST00000390468 SLC35F4A4IF30 521 aa3.66□□□□□ -1.82
TRAV41-201ENST00000390468 LILRB3O75022 631 aa3.66□□□□□ -1.82
TRAV41-201ENST00000390468 ADAMTS2O95450 1211 aa3.66□□□□□ -1.82
TRAV41-201ENST00000390468 CLK2P49760 499 aaKnown RBP3.66□□□□□ -1.82
TRAV41-201ENST00000390468 LRRN4Q8WUT4 740 aa3.66□□□□□ -1.82
TRAV41-201ENST00000390468 AK7Q96M32 723 aa3.66□□□□□ -1.82
TRAV41-201ENST00000390468 TMPRSS4Q9NRS4 437 aa3.66□□□□□ -1.82
TRAV41-201ENST00000390468 RRBP1Q9P2E9 1410 aaKnown RBP3.66□□□□□ -1.82
TRAV41-201ENST00000390468 DNMT1P26358 1616 aaKnown RBP3.66□□□□□ -1.82
TRAV41-201ENST00000390468 TTC37Q6PGP7 1564 aa3.65□□□□□ -1.82
TRAV41-201ENST00000390468 PTPRGP23470 1445 aa3.65□□□□□ -1.83
TRAV41-201ENST00000390468 RHOQP17081 205 aa3.65□□□□□ -1.83
TRAV41-201ENST00000390468 DHX9Q08211 1270 aaKnown RBP3.65□□□□□ -1.83
TRAV41-201ENST00000390468 PDE4DQ08499 809 aa3.65□□□□□ -1.83
TRAV41-201ENST00000390468 NR6A1Q15406 480 aa3.65□□□□□ -1.83
TRAV41-201ENST00000390468 INTS6LQ5JSJ4 861 aaKnown RBP3.65□□□□□ -1.83
TRAV41-201ENST00000390468 KANK4Q5T7N3 995 aaPredicted RBP3.65□□□□□ -1.83
TRAV41-201ENST00000390468 LYPD4Q6UWN0 246 aa3.65□□□□□ -1.83
TRAV41-201ENST00000390468 Q6ZVU0 165 aa3.65□□□□□ -1.83
TRAV41-201ENST00000390468 C14orf37Q86TY3 774 aa3.65□□□□□ -1.83
TRAV41-201ENST00000390468 RNF217Q8TC41 542 aa3.65□□□□□ -1.83
TRAV41-201ENST00000390468 NANOS1Q8WY41 292 aaKnown RBP3.65□□□□□ -1.83
TRAV41-201ENST00000390468 FKBPLQ9UIM3 349 aa3.65□□□□□ -1.83
TRAV41-201ENST00000390468 DNMT3AQ9Y6K1 912 aaPredicted RBP3.65□□□□□ -1.83
TRAV41-201ENST00000390468 KIF13AQ9H1H9 1805 aa3.65□□□□□ -1.83
TRAV41-201ENST00000390468 CCNB3Q8WWL7 1395 aa3.64□□□□□ -1.83
TRAV41-201ENST00000390468 CFAP74Q9C0B2 1584 aa3.64□□□□□ -1.83
TRAV41-201ENST00000390468 MYOM3Q5VTT5 1437 aa3.64□□□□□ -1.83
TRAV41-201ENST00000390468 UACAQ9BZF9 1416 aa3.64□□□□□ -1.83
TRAV41-201ENST00000390468 ARID3CA6NKF2 412 aa3.64□□□□□ -1.83
TRAV41-201ENST00000390468 GPR25O00155 361 aa3.64□□□□□ -1.83
TRAV41-201ENST00000390468 ARHGEF15O94989 841 aa3.64□□□□□ -1.83
TRAV41-201ENST00000390468 PDIA4P13667 645 aaKnown RBP3.64□□□□□ -1.83
TRAV41-201ENST00000390468 PDE4CQ08493 712 aa3.64□□□□□ -1.83
TRAV41-201ENST00000390468 RIPOR1Q6ZS17 1223 aa3.64□□□□□ -1.83
TRAV41-201ENST00000390468 PRICKLE2Q7Z3G6 844 aa3.64□□□□□ -1.83
TRAV41-201ENST00000390468 ZNF784Q8NCA9 323 aaPredicted RBP3.64□□□□□ -1.83
TRAV41-201ENST00000390468 GPKOWQ92917 476 aaPredicted RBP eCLIP3.64□□□□□ -1.83
TRAV41-201ENST00000390468 SCARF2Q96GP6 870 aaPredicted RBP3.64□□□□□ -1.83
TRAV41-201ENST00000390468 CDK11AQ9UQ88 783 aaPredicted RBP3.64□□□□□ -1.83
TRAV41-201ENST00000390468 UHRF1BP1LA0JNW5 1464 aa3.64□□□□□ -1.83
TRAV41-201ENST00000390468 CFAP65Q6ZU64 1925 aaKnown RBP3.64□□□□□ -1.83
TRAV41-201ENST00000390468 PHLDB1Q86UU1 1377 aa3.63□□□□□ -1.83
TRAV41-201ENST00000390468 ABCA9Q8IUA7 1624 aa3.63□□□□□ -1.83
TRAV41-201ENST00000390468 TROQ12816 1431 aaPredicted RBP3.63□□□□□ -1.83
TRAV41-201ENST00000390468 FGD6Q6ZV73 1430 aa3.63□□□□□ -1.83
TRAV41-201ENST00000390468 ATP10BO94823 1461 aa3.63□□□□□ -1.83
TRAV41-201ENST00000390468 SENP3-EIF4A1A0A087X0R7 540 aa3.63□□□□□ -1.83
TRAV41-201ENST00000390468 SLURP2P0DP57 97 aa3.63□□□□□ -1.83
TRAV41-201ENST00000390468 DEKP35659 375 aaKnown RBP3.63□□□□□ -1.83
TRAV41-201ENST00000390468 BRPF1P55201 1214 aaPredicted RBP3.63□□□□□ -1.83
TRAV41-201ENST00000390468 PTK2Q05397 1052 aa3.63□□□□□ -1.83
TRAV41-201ENST00000390468 NEUROD2Q15784 382 aa3.63□□□□□ -1.83
TRAV41-201ENST00000390468 KANK3Q6NY19 840 aa3.63□□□□□ -1.83
TRAV41-201ENST00000390468 PDXDC2PQ6P474 469 aa3.63□□□□□ -1.83
TRAV41-201ENST00000390468 DZIP3Q86Y13 1208 aaKnown RBP3.63□□□□□ -1.83
TRAV41-201ENST00000390468 NEDD1Q8NHV4 660 aa3.63□□□□□ -1.83
TRAV41-201ENST00000390468 ADAM32Q8TC27 787 aa3.63□□□□□ -1.83
TRAV41-201ENST00000390468 SLC24A3Q9HC58 644 aa3.63□□□□□ -1.83
TRAV41-201ENST00000390468 CYLDQ9NQC7 956 aa3.63□□□□□ -1.83
TRAV41-201ENST00000390468 CUEDC1Q9NWM3 386 aaPredicted RBP3.63□□□□□ -1.83
TRAV41-201ENST00000390468 CNTNAP5Q8WYK1 1306 aa3.63□□□□□ -1.83
TRAV41-201ENST00000390468 SAMD9LQ8IVG5 1584 aa3.63□□□□□ -1.83
TRAV41-201ENST00000390468 CAMSAP2Q08AD1 1489 aa3.62□□□□□ -1.83
TRAV41-201ENST00000390468 TCOF1Q13428 1488 aaKnown RBP3.62□□□□□ -1.83
TRAV41-201ENST00000390468 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP3.62□□□□□ -1.83
TRAV41-201ENST00000390468 KDM5BQ9UGL1 1544 aa3.62□□□□□ -1.83
TRAV41-201ENST00000390468 ERVH48-1M5A8F1 160 aa3.62□□□□□ -1.83
TRAV41-201ENST00000390468 MEN1O00255 615 aa3.62□□□□□ -1.83
TRAV41-201ENST00000390468 AP1G2O75843 785 aa3.62□□□□□ -1.83
TRAV41-201ENST00000390468 ADH1AP07327 375 aa3.62□□□□□ -1.83
TRAV41-201ENST00000390468 CELA2BP08218 269 aaPredicted RBP3.62□□□□□ -1.83
TRAV41-201ENST00000390468 NBPF20Q3BBV1 942 aa3.62□□□□□ -1.83
TRAV41-201ENST00000390468 ZNF326Q5BKZ1 582 aaKnown RBP3.62□□□□□ -1.83
TRAV41-201ENST00000390468 FOXD4L5Q5VV16 416 aaPredicted RBP3.62□□□□□ -1.83
TRAV41-201ENST00000390468 LYSMD3Q7Z3D4 306 aa3.62□□□□□ -1.83
TRAV41-201ENST00000390468 HOMEZQ8IX15 550 aa3.62□□□□□ -1.83
TRAV41-201ENST00000390468 GALNT6Q8NCL4 622 aa3.62□□□□□ -1.83
TRAV41-201ENST00000390468 GAS2L1Q99501 681 aaPredicted RBP3.62□□□□□ -1.83
TRAV41-201ENST00000390468 ENAMQ9NRM1 1142 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms