RNA–Protein interactions for RNA: ENST00000389301.7

FANCA-202, Transcript of FA complementation group A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FANCA, Length 5,451 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-202ENST00000389301 GNL3LQ9NVN8 582 aaKnown RBP14.59□□□□□ -0.07
FANCA-202ENST00000389301 LRPPRCP42704 1394 aaKnown RBP14.59□□□□□ -0.07
FANCA-202ENST00000389301 NFE2L2Q16236 605 aa14.59□□□□□ -0.07
FANCA-202ENST00000389301 UBAC1Q9BSL1 405 aa14.59□□□□□ -0.07
FANCA-202ENST00000389301 CEP131Q9UPN4 1083 aa14.59□□□□□ -0.07
FANCA-202ENST00000389301 XRCC6P12956 609 aaKnown RBP eCLIP14.59□□□□□ -0.078e-8■■■■■ 32.2
FANCA-202ENST00000389301 EZRP15311 586 aaKnown RBP14.59□□□□□ -0.07
FANCA-202ENST00000389301 GBP2P32456 591 aaPredicted RBP14.59□□□□□ -0.07
FANCA-202ENST00000389301 TICAM2Q86XR7 235 aa14.59□□□□□ -0.07
FANCA-202ENST00000389301 TBC1D32Q96NH3 1257 aa14.59□□□□□ -0.07
FANCA-202ENST00000389301 CTAGE5O15320 804 aa14.59□□□□□ -0.07
FANCA-202ENST00000389301 LMAN1P49257 510 aa14.59□□□□□ -0.07
FANCA-202ENST00000389301 CEP135Q66GS9 1140 aa14.59□□□□□ -0.07
FANCA-202ENST00000389301 TMC6Q7Z403 805 aa14.59□□□□□ -0.07
FANCA-202ENST00000389301 GSDMDP57764 484 aa14.58□□□□□ -0.07
FANCA-202ENST00000389301 BMS1Q14692 1282 aaKnown RBP14.58□□□□□ -0.07
FANCA-202ENST00000389301 CCDC113Q9H0I3 377 aa14.58□□□□□ -0.07
FANCA-202ENST00000389301 DDX19AQ9NUU7 478 aaKnown RBP14.58□□□□□ -0.07
FANCA-202ENST00000389301 SNW1Q13573 536 aaKnown RBP14.58□□□□□ -0.08
FANCA-202ENST00000389301 LIMCH1Q9UPQ0 1083 aa14.58□□□□□ -0.08
FANCA-202ENST00000389301 UVSSAQ2YD98 709 aa14.58□□□□□ -0.08
FANCA-202ENST00000389301 SMARCC1Q92922 1105 aaPredicted RBP14.58□□□□□ -0.08
FANCA-202ENST00000389301 FAM107BQ9H098 131 aa14.58□□□□□ -0.08
FANCA-202ENST00000389301 BMP2KQ9NSY1 1161 aaPredicted RBP14.58□□□□□ -0.08
FANCA-202ENST00000389301 ARHGAP5Q13017 1502 aa14.58□□□□□ -0.08
FANCA-202ENST00000389301 C11orf95C9JLR9 678 aaPredicted RBP14.58□□□□□ -0.08
FANCA-202ENST00000389301 TDO2P48775 406 aa14.58□□□□□ -0.08
FANCA-202ENST00000389301 ATP2B2Q01814 1243 aa14.58□□□□□ -0.08
FANCA-202ENST00000389301 GUCY1B3Q02153 619 aa14.58□□□□□ -0.08
FANCA-202ENST00000389301 IPO4Q8TEX9 1081 aaKnown RBP14.58□□□□□ -0.08
FANCA-202ENST00000389301 KIF1BPQ96EK5 621 aa14.58□□□□□ -0.08
FANCA-202ENST00000389301 SLC26A8Q96RN1 970 aa14.58□□□□□ -0.08
FANCA-202ENST00000389301 LARP6Q9BRS8 491 aaKnown RBP14.57□□□□□ -0.08
FANCA-202ENST00000389301 RBM42Q9BTD8 480 aaKnown RBP14.57□□□□□ -0.08
FANCA-202ENST00000389301 GLRX3O76003 335 aaKnown RBP14.57□□□□□ -0.08
FANCA-202ENST00000389301 MICALCLQ6ZW33 695 aa14.57□□□□□ -0.08
FANCA-202ENST00000389301 PIBF1Q8WXW3 757 aa14.57□□□□□ -0.08
FANCA-202ENST00000389301 TIGD1Q96MW7 591 aa14.57□□□□□ -0.08
FANCA-202ENST00000389301 THUMPD2Q9BTF0 503 aaKnown RBP14.57□□□□□ -0.08
FANCA-202ENST00000389301 CPLX3Q8WVH0 158 aa14.57□□□□□ -0.08
FANCA-202ENST00000389301 ZNF830Q96NB3 372 aaPredicted RBP14.57□□□□□ -0.08
FANCA-202ENST00000389301 PANK2Q9BZ23 570 aa14.57□□□□□ -0.08
FANCA-202ENST00000389301 NSD3Q9BZ95 1437 aa14.57□□□□□ -0.08
FANCA-202ENST00000389301 TBC1D9Q6ZT07 1266 aa14.57□□□□□ -0.08
FANCA-202ENST00000389301 RAB11FIP3O75154 756 aa14.56□□□□□ -0.08
FANCA-202ENST00000389301 POLA1P09884 1462 aaPredicted RBP14.56□□□□□ -0.08
FANCA-202ENST00000389301 POTEB2H3BUK9 544 aa14.56□□□□□ -0.08
FANCA-202ENST00000389301 ALDH1L2Q3SY69 923 aa14.56□□□□□ -0.08
FANCA-202ENST00000389301 ZNF530Q6P9A1 599 aaPredicted RBP14.56□□□□□ -0.08
FANCA-202ENST00000389301 ZFP91Q96JP5 570 aaPredicted RBP14.56□□□□□ -0.08
FANCA-202ENST00000389301 PAXBP1Q9Y5B6 917 aa14.56□□□□□ -0.08
FANCA-202ENST00000389301 RRS1Q15050 365 aaKnown RBP14.56□□□□□ -0.08
FANCA-202ENST00000389301 LRSAM1Q6UWE0 723 aa14.56□□□□□ -0.08
FANCA-202ENST00000389301 GOLGA6L10A0A0M3HER8 536 aa14.56□□□□□ -0.08
FANCA-202ENST00000389301 STX1AQ16623 288 aa14.56□□□□□ -0.08
FANCA-202ENST00000389301 ERICH3Q5RHP9 1530 aa14.56□□□□□ -0.08
FANCA-202ENST00000389301 IGHDP01880 384 aa14.55□□□□□ -0.08
FANCA-202ENST00000389301 LUZP1Q86V48 1076 aa14.55□□□□□ -0.08
FANCA-202ENST00000389301 FSIP1Q8NA03 581 aa14.55□□□□□ -0.08
FANCA-202ENST00000389301 GPRASP1Q5JY77 1395 aa14.55□□□□□ -0.08
FANCA-202ENST00000389301 KRT222Q8N1A0 295 aa14.55□□□□□ -0.08
FANCA-202ENST00000389301 GJB2P29033 226 aa14.55□□□□□ -0.08
FANCA-202ENST00000389301 C9orf84Q5VXU9 1444 aa14.55□□□□□ -0.08
FANCA-202ENST00000389301 C8orf76Q96K31 380 aa14.55□□□□□ -0.08
FANCA-202ENST00000389301 NUP88Q99567 741 aaPredicted RBP14.55□□□□□ -0.08
FANCA-202ENST00000389301 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.55□□□□□ -0.082e-6■■■■■ 27.2
FANCA-202ENST00000389301 BCCIPQ9P287 314 aaKnown RBP eCLIP14.55□□□□□ -0.08
FANCA-202ENST00000389301 STX6O43752 255 aa14.55□□□□□ -0.08
FANCA-202ENST00000389301 IFFO1Q0D2I5 559 aa14.55□□□□□ -0.08
FANCA-202ENST00000389301 CTR9Q6PD62 1173 aa14.55□□□□□ -0.08
FANCA-202ENST00000389301 TFIP11Q9UBB9 837 aaKnown RBP14.55□□□□□ -0.08
FANCA-202ENST00000389301 HCLS1P14317 486 aaPredicted RBP14.54□□□□□ -0.08
FANCA-202ENST00000389301 DNA2P51530 1060 aa14.54□□□□□ -0.08
FANCA-202ENST00000389301 AFAP1Q8N556 730 aa14.54□□□□□ -0.08
FANCA-202ENST00000389301 CEP126Q9P2H0 1117 aa14.54□□□□□ -0.08
FANCA-202ENST00000389301 U3KPZ7 1027 aaPredicted RBP14.54□□□□□ -0.08
FANCA-202ENST00000389301 FKBP15Q5T1M5 1219 aa14.54□□□□□ -0.08
FANCA-202ENST00000389301 MIS18AQ9NYP9 233 aa14.54□□□□□ -0.08
FANCA-202ENST00000389301 EHBP1L1Q8N3D4 1523 aa14.54□□□□□ -0.08
FANCA-202ENST00000389301 BIN1O00499 593 aa14.54□□□□□ -0.08
FANCA-202ENST00000389301 ZNF165P49910 485 aa14.54□□□□□ -0.08
FANCA-202ENST00000389301 CCDC178Q5BJE1 867 aa14.54□□□□□ -0.08
FANCA-202ENST00000389301 TXNDC2Q86VQ3 553 aa14.54□□□□□ -0.08
FANCA-202ENST00000389301 NOLC1Q14978 699 aaKnown RBP eCLIP14.54□□□□□ -0.08
FANCA-202ENST00000389301 SPINK5Q9NQ38 1064 aaPredicted RBP14.54□□□□□ -0.08
FANCA-202ENST00000389301 BOLA2Q9H3K6 86 aa14.53□□□□□ -0.08
FANCA-202ENST00000389301 DUSP27Q5VZP5 1158 aa14.53□□□□□ -0.08
FANCA-202ENST00000389301 TATP17735 454 aaPredicted RBP14.53□□□□□ -0.08
FANCA-202ENST00000389301 UBE2HP62256 183 aa14.53□□□□□ -0.08
FANCA-202ENST00000389301 PAFAH1B1P43034 410 aa14.53□□□□□ -0.08
FANCA-202ENST00000389301 BTBD11A6QL63 1104 aa14.52□□□□□ -0.08
FANCA-202ENST00000389301 BMP2KLQ5H9B9 411 aa14.52□□□□□ -0.08
FANCA-202ENST00000389301 CNNM3Q8NE01 707 aa14.52□□□□□ -0.08
FANCA-202ENST00000389301 ZNF692Q9BU19 519 aaPredicted RBP14.52□□□□□ -0.08
FANCA-202ENST00000389301 GOPCQ9HD26 462 aa14.52□□□□□ -0.08
FANCA-202ENST00000389301 YEATS4O95619 227 aa14.52□□□□□ -0.08
FANCA-202ENST00000389301 TRIM27P14373 513 aa14.52□□□□□ -0.08
FANCA-202ENST00000389301 CABP4P57796 275 aa14.52□□□□□ -0.08
FANCA-202ENST00000389301 IDH1O75874 414 aaKnown RBP14.52□□□□□ -0.09
FANCA-202ENST00000389301 GIMAP6Q6P9H5 292 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 142 ms