RNA–Protein interactions for RNA: ENST00000389048.7

ALK-201, Transcript of ALK receptor tyrosine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ALK, Length 6,220 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALK-201ENST00000389048 BIN1O00499 593 aa18.13■□□□□ 0.49
ALK-201ENST00000389048 CCDC184Q52MB2 194 aa18.13■□□□□ 0.49
ALK-201ENST00000389048 CDK19Q9BWU1 502 aa18.13■□□□□ 0.49
ALK-201ENST00000389048 CCDC91Q7Z6B0 441 aa18.12■□□□□ 0.49
ALK-201ENST00000389048 TXLNBQ8N3L3 684 aa18.12■□□□□ 0.49
ALK-201ENST00000389048 CEP63Q96MT8 703 aa18.12■□□□□ 0.49
ALK-201ENST00000389048 SLC26A8Q96RN1 970 aa18.12■□□□□ 0.49
ALK-201ENST00000389048 THUMPD2Q9BTF0 503 aaKnown RBP18.12■□□□□ 0.49
ALK-201ENST00000389048 TERF1P54274 439 aa18.12■□□□□ 0.49
ALK-201ENST00000389048 AIDAQ96BJ3 306 aa18.12■□□□□ 0.49
ALK-201ENST00000389048 CLIP2Q9UDT6 1046 aa18.12■□□□□ 0.49
ALK-201ENST00000389048 CACNA2D4Q7Z3S7 1137 aa18.12■□□□□ 0.49
ALK-201ENST00000389048 CDKL5O76039 1030 aa18.12■□□□□ 0.49
ALK-201ENST00000389048 NUP88Q99567 741 aaPredicted RBP18.12■□□□□ 0.49
ALK-201ENST00000389048 ATF7IPQ6VMQ6 1270 aa18.11■□□□□ 0.49
ALK-201ENST00000389048 ZSWIM4Q9H7M6 989 aa18.11■□□□□ 0.49
ALK-201ENST00000389048 LUZP1Q86V48 1076 aa18.11■□□□□ 0.49
ALK-201ENST00000389048 BOLA2Q9H3K6 86 aa18.11■□□□□ 0.49
ALK-201ENST00000389048 TMEM57Q8N5G2 664 aa18.11■□□□□ 0.49
ALK-201ENST00000389048 FAM107BQ9H098 131 aa18.11■□□□□ 0.49
ALK-201ENST00000389048 ZNF526Q8TF50 670 aaPredicted RBP18.1■□□□□ 0.49
ALK-201ENST00000389048 PTPRGP23470 1445 aa18.1■□□□□ 0.49
ALK-201ENST00000389048 CCT2P78371 535 aaKnown RBP18.1■□□□□ 0.49
ALK-201ENST00000389048 AAMPQ13685 434 aa18.1■□□□□ 0.49
ALK-201ENST00000389048 IMMTQ16891 758 aaKnown RBP18.1■□□□□ 0.49
ALK-201ENST00000389048 PANK2Q9BZ23 570 aa18.1■□□□□ 0.49
ALK-201ENST00000389048 MMRN2Q9H8L6 949 aa18.1■□□□□ 0.49
ALK-201ENST00000389048 ZNF219Q9P2Y4 722 aaPredicted RBP18.1■□□□□ 0.49
ALK-201ENST00000389048 ZSCAN25Q6NSZ9 544 aa18.09■□□□□ 0.49
ALK-201ENST00000389048 USP25Q9UHP3 1055 aa18.09■□□□□ 0.49
ALK-201ENST00000389048 KIF5CO60282 957 aa18.09■□□□□ 0.49
ALK-201ENST00000389048 USP8P40818 1118 aa18.09■□□□□ 0.49
ALK-201ENST00000389048 SSFA2P28290 1259 aa18.09■□□□□ 0.49
ALK-201ENST00000389048 PIP4K2BP78356 416 aa18.09■□□□□ 0.49
ALK-201ENST00000389048 RBM27Q9P2N5 1060 aaKnown RBP18.09■□□□□ 0.49
ALK-201ENST00000389048 SFPQP23246 707 aaKnown RBP eCLIP18.08■□□□□ 0.49
ALK-201ENST00000389048 PRPF4BQ13523 1007 aaKnown RBP18.08■□□□□ 0.49
ALK-201ENST00000389048 TDRD12Q587J7 1177 aaKnown RBP18.08■□□□□ 0.49
ALK-201ENST00000389048 PPP6R1Q9UPN7 881 aa18.08■□□□□ 0.49
ALK-201ENST00000389048 TOP1P11387 765 aaKnown RBP18.08■□□□□ 0.49
ALK-201ENST00000389048 TMCO5BA8MYB1 307 aa18.08■□□□□ 0.48
ALK-201ENST00000389048 DESP17661 470 aa18.08■□□□□ 0.48
ALK-201ENST00000389048 PROSER2Q86WR7 435 aaPredicted RBP18.08■□□□□ 0.48
ALK-201ENST00000389048 POLR3DP05423 398 aaPredicted RBP18.07■□□□□ 0.48
ALK-201ENST00000389048 PDE3AQ14432 1141 aa18.07■□□□□ 0.48
ALK-201ENST00000389048 PPP4R3BQ5MIZ7 849 aa18.07■□□□□ 0.48
ALK-201ENST00000389048 METTL24Q5JXM2 366 aa18.07■□□□□ 0.48
ALK-201ENST00000389048 MCM10Q7L590 875 aa18.07■□□□□ 0.48
ALK-201ENST00000389048 RNF216Q9NWF9 866 aaPredicted RBP18.07■□□□□ 0.48
ALK-201ENST00000389048 SEC63Q9UGP8 760 aaKnown RBP18.07■□□□□ 0.48
ALK-201ENST00000389048 CCDC96Q2M329 555 aa18.06■□□□□ 0.48
ALK-201ENST00000389048 CEP126Q9P2H0 1117 aa18.06■□□□□ 0.48
ALK-201ENST00000389048 HLTFQ14527 1009 aaKnown RBP eCLIP18.06■□□□□ 0.48
ALK-201ENST00000389048 LARP1Q6PKG0 1096 aaKnown RBP18.06■□□□□ 0.48
ALK-201ENST00000389048 USHBP1Q8N6Y0 703 aa18.06■□□□□ 0.48
ALK-201ENST00000389048 ZSCAN31Q96LW9 406 aaPredicted RBP18.06■□□□□ 0.48
ALK-201ENST00000389048 ZSCAN30Q86W11 494 aa18.05■□□□□ 0.48
ALK-201ENST00000389048 CCDC8Q9H0W5 538 aaPredicted RBP18.05■□□□□ 0.48
ALK-201ENST00000389048 FKBP15Q5T1M5 1219 aa18.05■□□□□ 0.48
ALK-201ENST00000389048 TMC6Q7Z403 805 aa18.05■□□□□ 0.48
ALK-201ENST00000389048 RANBP6O60518 1105 aaKnown RBP18.05■□□□□ 0.48
ALK-201ENST00000389048 ZNF830Q96NB3 372 aaPredicted RBP18.05■□□□□ 0.48
ALK-201ENST00000389048 CEP131Q9UPN4 1083 aa18.05■□□□□ 0.48
ALK-201ENST00000389048 HSP90AA4PQ58FG1 418 aa18.04■□□□□ 0.48
ALK-201ENST00000389048 WDR78Q5VTH9 848 aa18.04■□□□□ 0.48
ALK-201ENST00000389048 DRC1Q96MC2 740 aa18.04■□□□□ 0.48
ALK-201ENST00000389048 TFIP11Q9UBB9 837 aaKnown RBP18.04■□□□□ 0.48
ALK-201ENST00000389048 MKNK2Q9HBH9 465 aa18.04■□□□□ 0.48
ALK-201ENST00000389048 COMMD10Q9Y6G5 202 aa18.04■□□□□ 0.48
ALK-201ENST00000389048 DCAF8L1A6NGE4 600 aa18.04■□□□□ 0.48
ALK-201ENST00000389048 POTEJP0CG39 1038 aa18.04■□□□□ 0.48
ALK-201ENST00000389048 PTCD1O75127 700 aaKnown RBP18.04■□□□□ 0.48
ALK-201ENST00000389048 SMC1AQ14683 1233 aaKnown RBP18.04■□□□□ 0.48
ALK-201ENST00000389048 MAATS1Q7Z4T9 603 aa18.04■□□□□ 0.48
ALK-201ENST00000389048 TSG101Q99816 390 aa18.04■□□□□ 0.48
ALK-201ENST00000389048 MYD88Q99836 296 aa18.04■□□□□ 0.48
ALK-201ENST00000389048 CTNNA3Q9UI47 895 aa18.03■□□□□ 0.48
ALK-201ENST00000389048 C20orf194Q5TEA3 1177 aa18.03■□□□□ 0.48
ALK-201ENST00000389048 SPECC1Q5M775 1068 aa18.03■□□□□ 0.48
ALK-201ENST00000389048 CRACR2BQ8N4Y2 399 aaPredicted RBP18.03■□□□□ 0.48
ALK-201ENST00000389048 KIF18AQ8NI77 898 aa18.03■□□□□ 0.48
ALK-201ENST00000389048 CTNNA2P26232 953 aa18.03■□□□□ 0.48
ALK-201ENST00000389048 IGHMBP2P38935 993 aaKnown RBP18.03■□□□□ 0.48
ALK-201ENST00000389048 VAT1LQ9HCJ6 419 aa18.03■□□□□ 0.48
ALK-201ENST00000389048 SPG7Q9UQ90 795 aa18.03■□□□□ 0.48
ALK-201ENST00000389048 ZC3H6P61129 1189 aaKnown RBP18.02■□□□□ 0.48
ALK-201ENST00000389048 CCDC183Q5T5S1 534 aa18.02■□□□□ 0.48
ALK-201ENST00000389048 TSHZ3Q63HK5 1081 aa18.02■□□□□ 0.48
ALK-201ENST00000389048 WASF1Q92558 559 aa18.02■□□□□ 0.48
ALK-201ENST00000389048 LMAN1P49257 510 aa18.02■□□□□ 0.48
ALK-201ENST00000389048 F6X3S4 739 aa18.02■□□□□ 0.47
ALK-201ENST00000389048 ZSCAN12O43309 604 aa18.02■□□□□ 0.47
ALK-201ENST00000389048 CTR9Q6PD62 1173 aa18.02■□□□□ 0.47
ALK-201ENST00000389048 SMARCA2P51531 1590 aa18.01■□□□□ 0.47
ALK-201ENST00000389048 PPP1R12BO60237 982 aaPredicted RBP18.01■□□□□ 0.47
ALK-201ENST00000389048 ZMYND15Q9H091 742 aa18.01■□□□□ 0.47
ALK-201ENST00000389048 PUF60Q9UHX1 559 aaKnown RBP18.01■□□□□ 0.47
ALK-201ENST00000389048 RAD54L2Q9Y4B4 1467 aa18.01■□□□□ 0.47
ALK-201ENST00000389048 CNNM3Q8NE01 707 aa18.01■□□□□ 0.47
ALK-201ENST00000389048 SF3B2Q13435 895 aaKnown RBP18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 171.3 ms