RNA–Protein interactions for RNA: ENST00000380996.9

TSSC4-203, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TSSC4, Length 1,544 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-203ENST00000380996 SHANK3Q9BYB0 1731 aa26.39■■□□□ 1.82
TSSC4-203ENST00000380996 NFATC2IPQ8NCF5 419 aa26.39■■□□□ 1.81
TSSC4-203ENST00000380996 SUPT16HQ9Y5B9 1047 aaKnown RBP26.39■■□□□ 1.81
TSSC4-203ENST00000380996 ZNF428Q96B54 188 aa26.38■■□□□ 1.81
TSSC4-203ENST00000380996 GLI3P10071 1580 aa26.38■■□□□ 1.81
TSSC4-203ENST00000380996 MRC1P22897 1456 aa26.37■■□□□ 1.81
TSSC4-203ENST00000380996 SCN11AQ9UI33 1791 aa26.37■■□□□ 1.81
TSSC4-203ENST00000380996 TWISTNBQ3B726 338 aaPredicted RBP26.35■■□□□ 1.81
TSSC4-203ENST00000380996 MARCH10Q8NA82 808 aaPredicted RBP26.35■■□□□ 1.81
TSSC4-203ENST00000380996 C8orf58Q8NAV2 365 aa26.34■■□□□ 1.81
TSSC4-203ENST00000380996 SOS1Q07889 1333 aaPredicted RBP26.33■■□□□ 1.81
TSSC4-203ENST00000380996 RBM6P78332 1123 aaKnown RBP26.33■■□□□ 1.81
TSSC4-203ENST00000380996 TMOD3Q9NYL9 352 aa26.33■■□□□ 1.81
TSSC4-203ENST00000380996 THSD7AQ9UPZ6 1657 aa26.32■■□□□ 1.8
TSSC4-203ENST00000380996 ELL2O00472 640 aaPredicted RBP26.32■■□□□ 1.8
TSSC4-203ENST00000380996 VAMP4O75379 141 aa26.32■■□□□ 1.8
TSSC4-203ENST00000380996 RARSP54136 660 aaKnown RBP26.32■■□□□ 1.8
TSSC4-203ENST00000380996 SEPT12Q8IYM1 358 aa26.32■■□□□ 1.8
TSSC4-203ENST00000380996 TSPYL6Q8N831 410 aa26.32■■□□□ 1.8
TSSC4-203ENST00000380996 EIF4A1P60842 406 aaKnown RBP26.31■■□□□ 1.8
TSSC4-203ENST00000380996 ZNF790Q6PG37 636 aa26.31■■□□□ 1.8
TSSC4-203ENST00000380996 TTC5Q8N0Z6 440 aa26.3■■□□□ 1.8
TSSC4-203ENST00000380996 VIRMAQ69YN4 1812 aaKnown RBP26.3■■□□□ 1.8
TSSC4-203ENST00000380996 ALDH1L2Q3SY69 923 aa26.29■■□□□ 1.8
TSSC4-203ENST00000380996 CHMP4AQ9BY43 222 aa26.29■■□□□ 1.8
TSSC4-203ENST00000380996 SIPA1L3O60292 1781 aaPredicted RBP26.29■■□□□ 1.8
TSSC4-203ENST00000380996 KRT24Q2M2I5 525 aa26.29■■□□□ 1.8
TSSC4-203ENST00000380996 POTEAQ6S8J7 498 aa26.29■■□□□ 1.8
TSSC4-203ENST00000380996 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.29■■□□□ 1.8
TSSC4-203ENST00000380996 RNF123Q5XPI4 1314 aa26.28■■□□□ 1.8
TSSC4-203ENST00000380996 KCNQ3O43525 872 aa26.28■■□□□ 1.8
TSSC4-203ENST00000380996 SLC39A6Q13433 755 aa26.28■■□□□ 1.8
TSSC4-203ENST00000380996 NEFLP07196 543 aa26.27■■□□□ 1.8
TSSC4-203ENST00000380996 HOXB7P09629 217 aa26.27■■□□□ 1.8
TSSC4-203ENST00000380996 RRP1P56182 461 aaKnown RBP26.26■■□□□ 1.79
TSSC4-203ENST00000380996 KDM3BQ7LBC6 1761 aa26.26■■□□□ 1.79
TSSC4-203ENST00000380996 BCAR3O75815 825 aa26.25■■□□□ 1.79
TSSC4-203ENST00000380996 RXRBP28702 533 aa26.25■■□□□ 1.79
TSSC4-203ENST00000380996 PRIM1P49642 420 aaKnown RBP26.25■■□□□ 1.79
TSSC4-203ENST00000380996 PIGBQ92521 554 aa26.25■■□□□ 1.79
TSSC4-203ENST00000380996 SYTL4Q96C24 671 aaPredicted RBP26.25■■□□□ 1.79
TSSC4-203ENST00000380996 SMC4Q9NTJ3 1288 aa26.25■■□□□ 1.79
TSSC4-203ENST00000380996 SSH1Q8WYL5 1049 aa26.24■■□□□ 1.79
TSSC4-203ENST00000380996 FMNL2Q96PY5 1086 aa26.24■■□□□ 1.79
TSSC4-203ENST00000380996 BCL9O00512 1426 aa26.23■■□□□ 1.79
TSSC4-203ENST00000380996 TOGARAM1Q9Y4F4 1720 aa26.23■■□□□ 1.79
TSSC4-203ENST00000380996 HEG1Q9ULI3 1381 aa26.22■■□□□ 1.79
TSSC4-203ENST00000380996 BCL2L13Q9BXK5 485 aa26.22■■□□□ 1.79
TSSC4-203ENST00000380996 GIGYF1O75420 1035 aaPredicted RBP26.21■■□□□ 1.79
TSSC4-203ENST00000380996 CCDC30Q5VVM6 783 aa26.21■■□□□ 1.79
TSSC4-203ENST00000380996 ACSBG1Q96GR2 724 aa26.21■■□□□ 1.79
TSSC4-203ENST00000380996 ZNF496Q96IT1 587 aaPredicted RBP26.21■■□□□ 1.79
TSSC4-203ENST00000380996 BRPF1P55201 1214 aaPredicted RBP26.2■■□□□ 1.79
TSSC4-203ENST00000380996 CANXP27824 592 aaKnown RBP26.19■■□□□ 1.78
TSSC4-203ENST00000380996 KIF16BQ96L93 1317 aa26.19■■□□□ 1.78
TSSC4-203ENST00000380996 SNRPA1P09661 255 aaKnown RBP26.19■■□□□ 1.78
TSSC4-203ENST00000380996 HDGFL1Q5TGJ6 251 aa26.19■■□□□ 1.78
TSSC4-203ENST00000380996 KRT27Q7Z3Y8 459 aa26.19■■□□□ 1.78
TSSC4-203ENST00000380996 STK31Q9BXU1 1019 aa26.19■■□□□ 1.78
TSSC4-203ENST00000380996 ATG3Q9NT62 314 aa26.18■■□□□ 1.78
TSSC4-203ENST00000380996 SOCS7O14512 581 aa26.17■■□□□ 1.78
TSSC4-203ENST00000380996 MRPL50Q8N5N7 158 aaKnown RBP26.17■■□□□ 1.78
TSSC4-203ENST00000380996 FRAT1Q92837 279 aaPredicted RBP26.17■■□□□ 1.78
TSSC4-203ENST00000380996 ASAP1Q9ULH1 1129 aa26.17■■□□□ 1.78
TSSC4-203ENST00000380996 IPO8O15397 1037 aaKnown RBP26.16■■□□□ 1.78
TSSC4-203ENST00000380996 PLIN1O60240 522 aa26.16■■□□□ 1.78
TSSC4-203ENST00000380996 DOT1LQ8TEK3 1739 aa26.16■■□□□ 1.78
TSSC4-203ENST00000380996 EIF2S2P20042 333 aaKnown RBP26.15■■□□□ 1.78
TSSC4-203ENST00000380996 TCERG1O14776 1098 aaKnown RBP26.14■■□□□ 1.78
TSSC4-203ENST00000380996 PTCD1O75127 700 aaKnown RBP26.14■■□□□ 1.78
TSSC4-203ENST00000380996 ITGB4P16144 1822 aa26.14■■□□□ 1.77
TSSC4-203ENST00000380996 ZKSCAN2Q63HK3 967 aa26.14■■□□□ 1.77
TSSC4-203ENST00000380996 FAM196AQ6ZSG2 479 aa26.14■■□□□ 1.77
TSSC4-203ENST00000380996 SMARCC1Q92922 1105 aaPredicted RBP26.14■■□□□ 1.77
TSSC4-203ENST00000380996 PAPPAQ13219 1627 aa26.13■■□□□ 1.77
TSSC4-203ENST00000380996 SLC4A2P04920 1241 aa26.13■■□□□ 1.77
TSSC4-203ENST00000380996 FAM182BQ5T319 152 aa26.13■■□□□ 1.77
TSSC4-203ENST00000380996 VSIG10Q8N0Z9 540 aa26.13■■□□□ 1.77
TSSC4-203ENST00000380996 KCNQ2O43526 872 aa26.12■■□□□ 1.77
TSSC4-203ENST00000380996 MS4A1P11836 297 aa26.12■■□□□ 1.77
TSSC4-203ENST00000380996 NECTIN2Q92692 538 aa26.12■■□□□ 1.77
TSSC4-203ENST00000380996 NOB1Q9ULX3 412 aaKnown RBP26.12■■□□□ 1.77
TSSC4-203ENST00000380996 ARHGAP45Q92619 1136 aa26.11■■□□□ 1.77
TSSC4-203ENST00000380996 TEX13AQ9BXU3 409 aaPredicted RBP26.11■■□□□ 1.77
TSSC4-203ENST00000380996 KCPQ6ZWJ8 1503 aa26.11■■□□□ 1.77
TSSC4-203ENST00000380996 FKBP8Q14318 412 aa26.1■■□□□ 1.77
TSSC4-203ENST00000380996 RBM42Q9BTD8 480 aaKnown RBP26.1■■□□□ 1.77
TSSC4-203ENST00000380996 KAT6BQ8WYB5 2073 aa26.1■■□□□ 1.77
TSSC4-203ENST00000380996 PRAMEF22A3QJZ6 481 aa26.09■■□□□ 1.77
TSSC4-203ENST00000380996 PDE3AQ14432 1141 aa26.09■■□□□ 1.77
TSSC4-203ENST00000380996 DBF4Q9UBU7 674 aaPredicted RBP26.09■■□□□ 1.77
TSSC4-203ENST00000380996 GTF3C3Q9Y5Q9 886 aa26.09■■□□□ 1.77
TSSC4-203ENST00000380996 IRX6P78412 446 aaPredicted RBP26.09■■□□□ 1.77
TSSC4-203ENST00000380996 ATF7IPQ6VMQ6 1270 aa26.09■■□□□ 1.77
TSSC4-203ENST00000380996 USP16Q9Y5T5 823 aa26.08■■□□□ 1.77
TSSC4-203ENST00000380996 UBR2Q8IWV8 1755 aa26.08■■□□□ 1.76
TSSC4-203ENST00000380996 CHPF2Q9P2E5 772 aa26.07■■□□□ 1.76
TSSC4-203ENST00000380996 PTPRCP08575 1304 aa26.07■■□□□ 1.76
TSSC4-203ENST00000380996 API5Q9BZZ5 524 aaKnown RBP26.06■■□□□ 1.76
TSSC4-203ENST00000380996 BCL11BQ9C0K0 894 aaPredicted RBP26.06■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms