RNA–Protein interactions for RNA: ENST00000380393.7

PTPRA-204, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 1 (best) BASIC

Gene PTPRA, Length 3,636 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-204ENST00000380393 SMTNL1A8MU46 457 aa11.21□□□□□ -0.62
PTPRA-204ENST00000380393 ZKSCAN8Q15776 578 aaPredicted RBP11.21□□□□□ -0.62
PTPRA-204ENST00000380393 GPT2Q8TD30 523 aa11.21□□□□□ -0.62
PTPRA-204ENST00000380393 KIF1BPQ96EK5 621 aa11.21□□□□□ -0.62
PTPRA-204ENST00000380393 ATG3Q9NT62 314 aa11.21□□□□□ -0.62
PTPRA-204ENST00000380393 FAM53CQ9NYF3 392 aa11.21□□□□□ -0.62
PTPRA-204ENST00000380393 E9PCH4 1651 aa11.2□□□□□ -0.62
PTPRA-204ENST00000380393 BMS1Q14692 1282 aaKnown RBP11.2□□□□□ -0.62
PTPRA-204ENST00000380393 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.2□□□□□ -0.62
PTPRA-204ENST00000380393 CCDC112Q8NEF3 446 aa11.2□□□□□ -0.62
PTPRA-204ENST00000380393 BORCS6Q96GS4 357 aa11.2□□□□□ -0.62
PTPRA-204ENST00000380393 PRDM15P57071 1507 aaPredicted RBP11.2□□□□□ -0.62
PTPRA-204ENST00000380393 APAF1O14727 1248 aa11.2□□□□□ -0.62
PTPRA-204ENST00000380393 BCL2L13Q9BXK5 485 aa11.2□□□□□ -0.62
PTPRA-204ENST00000380393 CGNL1Q0VF96 1302 aa11.2□□□□□ -0.62
PTPRA-204ENST00000380393 H0YHG0 523 aa11.2□□□□□ -0.62
PTPRA-204ENST00000380393 SARNPP82979 210 aaKnown RBP11.2□□□□□ -0.62
PTPRA-204ENST00000380393 PYCARDQ9ULZ3 195 aa11.2□□□□□ -0.62
PTPRA-204ENST00000380393 RTF1Q92541 710 aaKnown RBP11.19□□□□□ -0.62
PTPRA-204ENST00000380393 ADCY5O95622 1261 aa11.19□□□□□ -0.62
PTPRA-204ENST00000380393 MCTP2Q6DN12 878 aa11.19□□□□□ -0.62
PTPRA-204ENST00000380393 ESF1Q9H501 851 aaKnown RBP11.19□□□□□ -0.62
PTPRA-204ENST00000380393 KNSTRNQ9Y448 316 aa11.19□□□□□ -0.62
PTPRA-204ENST00000380393 ZMYM3Q14202 1370 aa11.19□□□□□ -0.62
PTPRA-204ENST00000380393 K7ELQ4 463 aaPredicted RBP11.18□□□□□ -0.62
PTPRA-204ENST00000380393 IDI1Q13907 227 aa11.18□□□□□ -0.62
PTPRA-204ENST00000380393 JMYQ8N9B5 988 aa11.18□□□□□ -0.62
PTPRA-204ENST00000380393 PLEKHH1Q9ULM0 1364 aa11.18□□□□□ -0.62
PTPRA-204ENST00000380393 POLR3GO15318 223 aaPredicted RBP11.18□□□□□ -0.62
PTPRA-204ENST00000380393 GPS2Q13227 327 aa11.18□□□□□ -0.62
PTPRA-204ENST00000380393 FBXO38Q6PIJ6 1188 aa11.18□□□□□ -0.62
PTPRA-204ENST00000380393 GAS2L2Q8NHY3 880 aa11.18□□□□□ -0.62
PTPRA-204ENST00000380393 BSDC1Q9NW68 430 aaPredicted RBP11.18□□□□□ -0.62
PTPRA-204ENST00000380393 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.18□□□□□ -0.623e-8■■■■■ 27.9
PTPRA-204ENST00000380393 V9GYY5 206 aaPredicted RBP11.18□□□□□ -0.62
PTPRA-204ENST00000380393 PLCB2Q00722 1185 aa11.17□□□□□ -0.62
PTPRA-204ENST00000380393 ZMYM4Q5VZL5 1548 aa11.17□□□□□ -0.62
PTPRA-204ENST00000380393 DEPDC5O75140 1603 aa11.17□□□□□ -0.62
PTPRA-204ENST00000380393 PMFBP1Q8TBY8 1022 aa11.17□□□□□ -0.62
PTPRA-204ENST00000380393 C16orf45Q96MC5 204 aaPredicted RBP11.17□□□□□ -0.62
PTPRA-204ENST00000380393 ABCC3O15438 1527 aa11.17□□□□□ -0.62
PTPRA-204ENST00000380393 PER1O15534 1290 aaPredicted RBP11.17□□□□□ -0.62
PTPRA-204ENST00000380393 MAP9Q49MG5 647 aa11.17□□□□□ -0.62
PTPRA-204ENST00000380393 SWT1Q5T5J6 900 aaKnown RBP11.17□□□□□ -0.62
PTPRA-204ENST00000380393 ITFG2Q969R8 447 aa11.17□□□□□ -0.62
PTPRA-204ENST00000380393 PARD3Q8TEW0 1356 aa11.16□□□□□ -0.62
PTPRA-204ENST00000380393 KIF3CO14782 793 aa11.16□□□□□ -0.62
PTPRA-204ENST00000380393 MAGEA9P43362 315 aa11.16□□□□□ -0.62
PTPRA-204ENST00000380393 NUCB2P80303 420 aa11.16□□□□□ -0.62
PTPRA-204ENST00000380393 ARHGAP31Q2M1Z3 1444 aa11.16□□□□□ -0.62
PTPRA-204ENST00000380393 KLHL33A6NCF5 533 aa11.16□□□□□ -0.62
PTPRA-204ENST00000380393 CD2BP2O95400 341 aaKnown RBP11.16□□□□□ -0.62
PTPRA-204ENST00000380393 VWDEQ8N2E2 1590 aa11.16□□□□□ -0.62
PTPRA-204ENST00000380393 CT47B1P0C2W7 299 aaPredicted RBP11.15□□□□□ -0.62
PTPRA-204ENST00000380393 LIG1P18858 919 aa11.15□□□□□ -0.62
PTPRA-204ENST00000380393 TPM4P67936 248 aa11.15□□□□□ -0.62
PTPRA-204ENST00000380393 TRDNQ13061 729 aa11.15□□□□□ -0.62
PTPRA-204ENST00000380393 NSFL1CQ9UNZ2 370 aaKnown RBP11.15□□□□□ -0.62
PTPRA-204ENST00000380393 CCDC196A0A1B0GTZ2 297 aa11.15□□□□□ -0.63
PTPRA-204ENST00000380393 SUGP1Q8IWZ8 645 aaKnown RBP11.15□□□□□ -0.63
PTPRA-204ENST00000380393 PIK3R5Q8WYR1 880 aa11.15□□□□□ -0.63
PTPRA-204ENST00000380393 ADGRF5Q8IZF2 1346 aa11.15□□□□□ -0.63
PTPRA-204ENST00000380393 PLEKHG2Q9H7P9 1386 aa11.14□□□□□ -0.63
PTPRA-204ENST00000380393 SLFN5Q08AF3 891 aa11.14□□□□□ -0.63
PTPRA-204ENST00000380393 FAM184AQ8NB25 1140 aa11.14□□□□□ -0.63
PTPRA-204ENST00000380393 SMARCE1Q969G3 411 aa11.14□□□□□ -0.63
PTPRA-204ENST00000380393 HTATSF1O43719 755 aaKnown RBP11.14□□□□□ -0.63
PTPRA-204ENST00000380393 ST5P78524 1137 aa11.14□□□□□ -0.63
PTPRA-204ENST00000380393 TTC19Q6DKK2 380 aaPredicted RBP11.14□□□□□ -0.63
PTPRA-204ENST00000380393 EIF2AK4Q9P2K8 1649 aaKnown RBP11.14□□□□□ -0.63
PTPRA-204ENST00000380393 EFCAB6Q5THR3 1501 aa11.14□□□□□ -0.63
PTPRA-204ENST00000380393 IPO8O15397 1037 aaKnown RBP11.14□□□□□ -0.63
PTPRA-204ENST00000380393 UVSSAQ2YD98 709 aa11.14□□□□□ -0.63
PTPRA-204ENST00000380393 RRP7AQ9Y3A4 280 aaKnown RBP11.14□□□□□ -0.63
PTPRA-204ENST00000380393 CLTCL1P53675 1640 aa11.13□□□□□ -0.63
PTPRA-204ENST00000380393 PPP2R1AP30153 589 aa11.13□□□□□ -0.63
PTPRA-204ENST00000380393 TMF1P82094 1093 aa11.13□□□□□ -0.63
PTPRA-204ENST00000380393 ELF2Q15723 593 aa11.13□□□□□ -0.63
PTPRA-204ENST00000380393 FBXO18Q8NFZ0 1043 aa11.13□□□□□ -0.63
PTPRA-204ENST00000380393 KCNF1Q9H3M0 494 aa11.13□□□□□ -0.63
PTPRA-204ENST00000380393 STAG3Q9UJ98 1225 aa11.13□□□□□ -0.63
PTPRA-204ENST00000380393 PAXBP1Q9Y5B6 917 aa11.13□□□□□ -0.63
PTPRA-204ENST00000380393 TET3O43151 1660 aa11.13□□□□□ -0.63
PTPRA-204ENST00000380393 ZC3H12AQ5D1E8 599 aaKnown RBP11.13□□□□□ -0.63
PTPRA-204ENST00000380393 TTLL5Q6EMB2 1281 aa11.13□□□□□ -0.63
PTPRA-204ENST00000380393 CASC1Q6TDU7 716 aa11.13□□□□□ -0.63
PTPRA-204ENST00000380393 PTPRTO14522 1441 aa11.13□□□□□ -0.63
PTPRA-204ENST00000380393 ARHGEF40Q8TER5 1519 aa11.13□□□□□ -0.63
PTPRA-204ENST00000380393 RNF17Q9BXT8 1623 aaKnown RBP11.13□□□□□ -0.63
PTPRA-204ENST00000380393 NPHP1O15259 732 aa11.13□□□□□ -0.63
PTPRA-204ENST00000380393 MBD3O95983 291 aa11.13□□□□□ -0.63
PTPRA-204ENST00000380393 RBM5P52756 815 aaKnown RBP eCLIP11.13□□□□□ -0.638e-6■■■■□ 20.7
PTPRA-204ENST00000380393 C11orf91Q3C1V1 193 aa11.13□□□□□ -0.63
PTPRA-204ENST00000380393 CFAP70Q5T0N1 1121 aa11.13□□□□□ -0.63
PTPRA-204ENST00000380393 MMS22LQ6ZRQ5 1243 aa11.13□□□□□ -0.63
PTPRA-204ENST00000380393 GOLGA5Q8TBA6 731 aa11.13□□□□□ -0.63
PTPRA-204ENST00000380393 CEP89Q96ST8 783 aa11.13□□□□□ -0.63
PTPRA-204ENST00000380393 TNNQ9UQP3 1299 aa11.13□□□□□ -0.63
PTPRA-204ENST00000380393 TPM3P06753 285 aa11.12□□□□□ -0.63
PTPRA-204ENST00000380393 RABEP1Q15276 862 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms