RNA–Protein interactions for RNA: ENST00000380243.8

CCDC85C-201, Transcript of coiled-coil domain containing 85C, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CCDC85C, Length 16,393 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85C-201ENST00000380243 CTAGE8P0CG41 777 aa12.16□□□□□ -0.46
CCDC85C-201ENST00000380243 CTAGE6Q86UF2 777 aa12.16□□□□□ -0.46
CCDC85C-201ENST00000380243 CTAGE4Q8IX94 777 aa12.16□□□□□ -0.46
CCDC85C-201ENST00000380243 SMC5Q8IY18 1101 aa12.16□□□□□ -0.46
CCDC85C-201ENST00000380243 NEUROD6Q96NK8 337 aa12.16□□□□□ -0.46
CCDC85C-201ENST00000380243 GTF2E1P29083 439 aaPredicted RBP12.16□□□□□ -0.46
CCDC85C-201ENST00000380243 BMP2KLQ5H9B9 411 aa12.16□□□□□ -0.46
CCDC85C-201ENST00000380243 CCDC50Q8IVM0 306 aa12.16□□□□□ -0.46
CCDC85C-201ENST00000380243 NGDNQ8NEJ9 315 aaKnown RBP12.16□□□□□ -0.46
CCDC85C-201ENST00000380243 PAFAH1B1P43034 410 aa12.16□□□□□ -0.46
CCDC85C-201ENST00000380243 GGT6Q6P531 493 aa12.16□□□□□ -0.46
CCDC85C-201ENST00000380243 CCAR1Q8IX12 1150 aaKnown RBP12.16□□□□□ -0.46
CCDC85C-201ENST00000380243 TBC1D9Q6ZT07 1266 aa12.16□□□□□ -0.46
CCDC85C-201ENST00000380243 MX1P20591 662 aa12.16□□□□□ -0.46
CCDC85C-201ENST00000380243 DNAI1Q9UI46 699 aa12.16□□□□□ -0.46
CCDC85C-201ENST00000380243 GTF3C6Q969F1 213 aa12.16□□□□□ -0.46
CCDC85C-201ENST00000380243 NAA15Q9BXJ9 866 aaKnown RBP12.16□□□□□ -0.46
CCDC85C-201ENST00000380243 ATP2C2O75185 946 aa12.15□□□□□ -0.46
CCDC85C-201ENST00000380243 NBPF11Q86T75 865 aa12.15□□□□□ -0.46
CCDC85C-201ENST00000380243 HYPKQ9NX55 129 aa12.15□□□□□ -0.46
CCDC85C-201ENST00000380243 TMCO5BA8MYB1 307 aa12.15□□□□□ -0.46
CCDC85C-201ENST00000380243 STX6O43752 255 aa12.15□□□□□ -0.46
CCDC85C-201ENST00000380243 GCOM1H8Y6P7 765 aaPredicted RBP12.15□□□□□ -0.46
CCDC85C-201ENST00000380243 MYZAPP0CAP1 466 aa12.15□□□□□ -0.46
CCDC85C-201ENST00000380243 CCDC186Q7Z3E2 898 aa12.15□□□□□ -0.46
CCDC85C-201ENST00000380243 CDK5RAP3Q96JB5 506 aa12.15□□□□□ -0.46
CCDC85C-201ENST00000380243 BAZ1AQ9NRL2 1556 aaPredicted RBP12.15□□□□□ -0.46
CCDC85C-201ENST00000380243 VPS18Q9P253 973 aa12.15□□□□□ -0.46
CCDC85C-201ENST00000380243 UTP14CQ5TAP6 766 aaKnown RBP12.15□□□□□ -0.46
CCDC85C-201ENST00000380243 ERO1AQ96HE7 468 aa12.15□□□□□ -0.46
CCDC85C-201ENST00000380243 TEFQ10587 303 aa12.15□□□□□ -0.47
CCDC85C-201ENST00000380243 ZNF428Q96B54 188 aa12.15□□□□□ -0.47
CCDC85C-201ENST00000380243 GDPD2Q9HCC8 539 aa12.15□□□□□ -0.47
CCDC85C-201ENST00000380243 HMOX1P09601 288 aa12.15□□□□□ -0.47
CCDC85C-201ENST00000380243 CCDC30Q5VVM6 783 aa12.15□□□□□ -0.47
CCDC85C-201ENST00000380243 TMEM57Q8N5G2 664 aa12.15□□□□□ -0.47
CCDC85C-201ENST00000380243 HNRNPMP52272 730 aaKnown RBP eCLIP12.14□□□□□ -0.478e-7■■■■□ 23
CCDC85C-201ENST00000380243 DNAJC21Q5F1R6 531 aaKnown RBP12.14□□□□□ -0.47
CCDC85C-201ENST00000380243 CTCFLQ8NI51 663 aaPredicted RBP12.14□□□□□ -0.47
CCDC85C-201ENST00000380243 GIMAP6Q6P9H5 292 aa12.14□□□□□ -0.47
CCDC85C-201ENST00000380243 CWC27Q6UX04 472 aaKnown RBP12.14□□□□□ -0.47
CCDC85C-201ENST00000380243 LRCH2Q5VUJ6 765 aa12.14□□□□□ -0.47
CCDC85C-201ENST00000380243 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.14□□□□□ -0.47
CCDC85C-201ENST00000380243 POTEDQ86YR6 584 aa12.14□□□□□ -0.47
CCDC85C-201ENST00000380243 RARSP54136 660 aaKnown RBP12.14□□□□□ -0.47
CCDC85C-201ENST00000380243 PIP4K2BP78356 416 aa12.14□□□□□ -0.47
CCDC85C-201ENST00000380243 CKAP4Q07065 602 aaKnown RBP12.14□□□□□ -0.47
CCDC85C-201ENST00000380243 NUP88Q99567 741 aaPredicted RBP12.14□□□□□ -0.47
CCDC85C-201ENST00000380243 EFCAB2Q5VUJ9 269 aa12.14□□□□□ -0.47
CCDC85C-201ENST00000380243 CCDC113Q9H0I3 377 aa12.14□□□□□ -0.47
CCDC85C-201ENST00000380243 MKRN1Q9UHC7 482 aaKnown RBP12.14□□□□□ -0.47
CCDC85C-201ENST00000380243 C8orf34Q49A92 452 aa12.14□□□□□ -0.47
CCDC85C-201ENST00000380243 USP48Q86UV5 1035 aa12.14□□□□□ -0.47
CCDC85C-201ENST00000380243 TWISTNBQ3B726 338 aaPredicted RBP12.14□□□□□ -0.47
CCDC85C-201ENST00000380243 USO1O60763 962 aaKnown RBP12.13□□□□□ -0.47
CCDC85C-201ENST00000380243 CCDC114Q96M63 670 aa12.13□□□□□ -0.47
CCDC85C-201ENST00000380243 WDR97A6NE52 1622 aa12.13□□□□□ -0.47
CCDC85C-201ENST00000380243 SLC3A2P08195 630 aaKnown RBP12.13□□□□□ -0.47
CCDC85C-201ENST00000380243 UBE4AQ14139 1066 aa12.13□□□□□ -0.47
CCDC85C-201ENST00000380243 FAM76AQ8TAV0 307 aa12.13□□□□□ -0.47
CCDC85C-201ENST00000380243 SWAP70Q9UH65 585 aa12.13□□□□□ -0.47
CCDC85C-201ENST00000380243 FSIP1Q8NA03 581 aa12.13□□□□□ -0.47
CCDC85C-201ENST00000380243 CCDC12Q8WUD4 166 aaPredicted RBP12.13□□□□□ -0.47
CCDC85C-201ENST00000380243 ATRIPQ8WXE1 791 aa12.13□□□□□ -0.47
CCDC85C-201ENST00000380243 CTNNA3Q9UI47 895 aa12.13□□□□□ -0.47
CCDC85C-201ENST00000380243 CCDC43Q96MW1 224 aaKnown RBP12.13□□□□□ -0.47
CCDC85C-201ENST00000380243 TFIP11Q9UBB9 837 aaKnown RBP12.13□□□□□ -0.47
CCDC85C-201ENST00000380243 CECR2Q9BXF3 1484 aa12.13□□□□□ -0.47
CCDC85C-201ENST00000380243 CTAGE9A4FU28 777 aa12.13□□□□□ -0.47
CCDC85C-201ENST00000380243 KIF3BO15066 747 aa12.13□□□□□ -0.47
CCDC85C-201ENST00000380243 SPECC1Q5M775 1068 aa12.12□□□□□ -0.47
CCDC85C-201ENST00000380243 LRPPRCP42704 1394 aaKnown RBP12.12□□□□□ -0.47
CCDC85C-201ENST00000380243 TANGO6Q9C0B7 1094 aa12.12□□□□□ -0.47
CCDC85C-201ENST00000380243 NUP133Q8WUM0 1156 aa12.12□□□□□ -0.47
CCDC85C-201ENST00000380243 PTGS1P23219 599 aa12.12□□□□□ -0.47
CCDC85C-201ENST00000380243 NBPF8Q3BBV2 869 aa12.12□□□□□ -0.47
CCDC85C-201ENST00000380243 TBC1D2BQ9UPU7 963 aa12.12□□□□□ -0.47
CCDC85C-201ENST00000380243 AACSQ86V21 672 aa12.12□□□□□ -0.47
CCDC85C-201ENST00000380243 DHX29Q7Z478 1369 aaKnown RBP12.12□□□□□ -0.47
CCDC85C-201ENST00000380243 WASF1Q92558 559 aa12.11□□□□□ -0.47
CCDC85C-201ENST00000380243 HLTFQ14527 1009 aaKnown RBP eCLIP12.11□□□□□ -0.47
CCDC85C-201ENST00000380243 DAAM2Q86T65 1068 aa12.11□□□□□ -0.47
CCDC85C-201ENST00000380243 PRPF40BQ6NWY9 871 aaKnown RBP12.11□□□□□ -0.47
CCDC85C-201ENST00000380243 CEP131Q9UPN4 1083 aa12.11□□□□□ -0.47
CCDC85C-201ENST00000380243 SYCP1Q15431 976 aa12.11□□□□□ -0.47
CCDC85C-201ENST00000380243 VGFO15240 615 aaPredicted RBP12.11□□□□□ -0.47
CCDC85C-201ENST00000380243 KIF5BP33176 963 aa12.11□□□□□ -0.47
CCDC85C-201ENST00000380243 RIC3Q7Z5B4 369 aa12.11□□□□□ -0.47
CCDC85C-201ENST00000380243 SLC4A2P04920 1241 aa12.11□□□□□ -0.47
CCDC85C-201ENST00000380243 KLHL10Q6JEL2 608 aa12.11□□□□□ -0.47
CCDC85C-201ENST00000380243 NSRP1Q9H0G5 558 aaKnown RBP12.11□□□□□ -0.47
CCDC85C-201ENST00000380243 SYT1P21579 422 aa12.11□□□□□ -0.47
CCDC85C-201ENST00000380243 SEPT6Q14141 434 aa12.11□□□□□ -0.47
CCDC85C-201ENST00000380243 TYRO3Q06418 890 aa12.1□□□□□ -0.47
CCDC85C-201ENST00000380243 PIBF1Q8WXW3 757 aa12.1□□□□□ -0.47
CCDC85C-201ENST00000380243 FGD6Q6ZV73 1430 aa12.1□□□□□ -0.47
CCDC85C-201ENST00000380243 INPP5BP32019 993 aa12.1□□□□□ -0.47
CCDC85C-201ENST00000380243 FMNL3Q8IVF7 1028 aa12.1□□□□□ -0.47
CCDC85C-201ENST00000380243 IGHDP01880 384 aa12.1□□□□□ -0.47
CCDC85C-201ENST00000380243 VPS36Q86VN1 386 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 320.8 ms