RNA–Protein interactions for RNA: ENST00000379215.8

ECHDC3-201, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ECHDC3, Length 1,649 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-201ENST00000379215 SSH1Q8WYL5 1049 aa31.53■■■□□ 2.64
ECHDC3-201ENST00000379215 SLC52A2Q9HAB3 445 aa31.53■■■□□ 2.64
ECHDC3-201ENST00000379215 BCL9LQ86UU0 1499 aa31.53■■■□□ 2.64
ECHDC3-201ENST00000379215 CHMP4AQ9BY43 222 aa31.53■■■□□ 2.64
ECHDC3-201ENST00000379215 TNKS1BP1Q9C0C2 1729 aaKnown RBP31.53■■■□□ 2.64
ECHDC3-201ENST00000379215 KDM3BQ7LBC6 1761 aa31.52■■■□□ 2.64
ECHDC3-201ENST00000379215 SHANK3Q9BYB0 1731 aa31.51■■■□□ 2.64
ECHDC3-201ENST00000379215 SIPA1L3O60292 1781 aaPredicted RBP31.51■■■□□ 2.63
ECHDC3-201ENST00000379215 PLIN1O60240 522 aa31.51■■■□□ 2.63
ECHDC3-201ENST00000379215 TNS2Q63HR2 1409 aa31.51■■■□□ 2.63
ECHDC3-201ENST00000379215 MS4A1P11836 297 aa31.5■■■□□ 2.63
ECHDC3-201ENST00000379215 PDE3AQ14432 1141 aa31.5■■■□□ 2.63
ECHDC3-201ENST00000379215 CCDC9Q9Y3X0 531 aaKnown RBP31.5■■■□□ 2.63
ECHDC3-201ENST00000379215 EXOC5O00471 708 aa31.49■■■□□ 2.63
ECHDC3-201ENST00000379215 ERVV-2B6SEH9 535 aa31.49■■■□□ 2.63
ECHDC3-201ENST00000379215 ELL2O00472 640 aaPredicted RBP31.49■■■□□ 2.63
ECHDC3-201ENST00000379215 BCL2L13Q9BXK5 485 aa31.49■■■□□ 2.63
ECHDC3-201ENST00000379215 IPO8O15397 1037 aaKnown RBP31.48■■■□□ 2.63
ECHDC3-201ENST00000379215 HOXB7P09629 217 aa31.48■■■□□ 2.63
ECHDC3-201ENST00000379215 DDX54Q8TDD1 881 aaKnown RBP31.48■■■□□ 2.63
ECHDC3-201ENST00000379215 USP21Q9UK80 565 aa31.48■■■□□ 2.63
ECHDC3-201ENST00000379215 CABP4P57796 275 aa31.46■■■□□ 2.63
ECHDC3-201ENST00000379215 ZKSCAN2Q63HK3 967 aa31.46■■■□□ 2.63
ECHDC3-201ENST00000379215 FRAT1Q92837 279 aaPredicted RBP31.46■■■□□ 2.63
ECHDC3-201ENST00000379215 EIF4A1P60842 406 aaKnown RBP31.45■■■□□ 2.62
ECHDC3-201ENST00000379215 KRT24Q2M2I5 525 aa31.43■■■□□ 2.62
ECHDC3-201ENST00000379215 DDB1Q16531 1140 aa31.42■■■□□ 2.62
ECHDC3-201ENST00000379215 MRPL50Q8N5N7 158 aaKnown RBP31.42■■■□□ 2.62
ECHDC3-201ENST00000379215 NFATC2IPQ8NCF5 419 aa31.42■■■□□ 2.62
ECHDC3-201ENST00000379215 PPP4R2Q9NY27 417 aa31.42■■■□□ 2.62
ECHDC3-201ENST00000379215 ARHGAP45Q92619 1136 aa31.41■■■□□ 2.62
ECHDC3-201ENST00000379215 CCDC30Q5VVM6 783 aa31.4■■■□□ 2.62
ECHDC3-201ENST00000379215 ZNF790Q6PG37 636 aa31.39■■■□□ 2.62
ECHDC3-201ENST00000379215 AFF2P51816 1311 aa31.39■■■□□ 2.61
ECHDC3-201ENST00000379215 ATF7IPQ6VMQ6 1270 aa31.38■■■□□ 2.61
ECHDC3-201ENST00000379215 TTC5Q8N0Z6 440 aa31.38■■■□□ 2.61
ECHDC3-201ENST00000379215 NOB1Q9ULX3 412 aaKnown RBP31.38■■■□□ 2.61
ECHDC3-201ENST00000379215 C20orf194Q5TEA3 1177 aa31.38■■■□□ 2.61
ECHDC3-201ENST00000379215 STK31Q9BXU1 1019 aa31.38■■■□□ 2.61
ECHDC3-201ENST00000379215 FTSJ3Q8IY81 847 aaKnown RBP31.37■■■□□ 2.61
ECHDC3-201ENST00000379215 HEG1Q9ULI3 1381 aa31.36■■■□□ 2.61
ECHDC3-201ENST00000379215 CRBNQ96SW2 442 aa31.36■■■□□ 2.61
ECHDC3-201ENST00000379215 DZIP1LQ8IYY4 767 aaKnown RBP31.35■■■□□ 2.61
ECHDC3-201ENST00000379215 EXOC6Q8TAG9 804 aa31.35■■■□□ 2.61
ECHDC3-201ENST00000379215 TRPC5Q9UL62 973 aaPredicted RBP31.35■■■□□ 2.61
ECHDC3-201ENST00000379215 KCNQ3O43525 872 aa31.34■■■□□ 2.61
ECHDC3-201ENST00000379215 TRIM27P14373 513 aa31.33■■■□□ 2.61
ECHDC3-201ENST00000379215 HDGFL1Q5TGJ6 251 aa31.33■■■□□ 2.61
ECHDC3-201ENST00000379215 API5Q9BZZ5 524 aaKnown RBP31.33■■■□□ 2.61
ECHDC3-201ENST00000379215 TMOD3Q9NYL9 352 aa31.33■■■□□ 2.61
ECHDC3-201ENST00000379215 PTPRCP08575 1304 aa31.33■■■□□ 2.61
ECHDC3-201ENST00000379215 ATRNO75882 1429 aa31.32■■■□□ 2.61
ECHDC3-201ENST00000379215 AAMPQ13685 434 aa31.32■■■□□ 2.6
ECHDC3-201ENST00000379215 GIGYF1O75420 1035 aaPredicted RBP31.31■■■□□ 2.6
ECHDC3-201ENST00000379215 FAM98CQ17RN3 349 aaKnown RBP31.31■■■□□ 2.6
ECHDC3-201ENST00000379215 FMNL2Q96PY5 1086 aa31.31■■■□□ 2.6
ECHDC3-201ENST00000379215 TOGARAM1Q9Y4F4 1720 aa31.3■■■□□ 2.6
ECHDC3-201ENST00000379215 GJD4Q96KN9 370 aaPredicted RBP31.3■■■□□ 2.6
ECHDC3-201ENST00000379215 SLC4A2P04920 1241 aa31.29■■■□□ 2.6
ECHDC3-201ENST00000379215 SLC39A6Q13433 755 aa31.29■■■□□ 2.6
ECHDC3-201ENST00000379215 PANK1Q8TE04 598 aa31.29■■■□□ 2.6
ECHDC3-201ENST00000379215 TCERG1O14776 1098 aaKnown RBP31.28■■■□□ 2.6
ECHDC3-201ENST00000379215 PAPPAQ13219 1627 aa31.28■■■□□ 2.6
ECHDC3-201ENST00000379215 THSD7AQ9UPZ6 1657 aa31.26■■■□□ 2.59
ECHDC3-201ENST00000379215 SNRPA1P09661 255 aaKnown RBP31.25■■■□□ 2.59
ECHDC3-201ENST00000379215 MVPQ14764 893 aaKnown RBP31.25■■■□□ 2.59
ECHDC3-201ENST00000379215 FBXO41Q8TF61 875 aa31.25■■■□□ 2.59
ECHDC3-201ENST00000379215 CLUAP1Q96AJ1 413 aa31.25■■■□□ 2.59
ECHDC3-201ENST00000379215 GLI3P10071 1580 aa31.24■■■□□ 2.59
ECHDC3-201ENST00000379215 ZNF496Q96IT1 587 aaPredicted RBP31.24■■■□□ 2.59
ECHDC3-201ENST00000379215 COG6Q9Y2V7 657 aa31.24■■■□□ 2.59
ECHDC3-201ENST00000379215 CACNA1FO60840 1977 aa31.24■■■□□ 2.59
ECHDC3-201ENST00000379215 RLBP1P12271 317 aa31.24■■■□□ 2.59
ECHDC3-201ENST00000379215 MARCH10Q8NA82 808 aaPredicted RBP31.24■■■□□ 2.59
ECHDC3-201ENST00000379215 EIF2S2P20042 333 aaKnown RBP31.23■■■□□ 2.59
ECHDC3-201ENST00000379215 CHMP4BQ9H444 224 aaKnown RBP31.23■■■□□ 2.59
ECHDC3-201ENST00000379215 ABCC4O15439 1325 aa31.23■■■□□ 2.59
ECHDC3-201ENST00000379215 BCL9O00512 1426 aa31.23■■■□□ 2.59
ECHDC3-201ENST00000379215 DBF4Q9UBU7 674 aaPredicted RBP31.22■■■□□ 2.59
ECHDC3-201ENST00000379215 DDX19BQ9UMR2 479 aa31.22■■■□□ 2.59
ECHDC3-201ENST00000379215 UBR2Q8IWV8 1755 aa31.22■■■□□ 2.59
ECHDC3-201ENST00000379215 A0A0G2JS52 829 aa31.21■■■□□ 2.59
ECHDC3-201ENST00000379215 MYT1Q01538 1121 aa31.21■■■□□ 2.59
ECHDC3-201ENST00000379215 CCDC136Q96JN2 1154 aa31.21■■■□□ 2.59
ECHDC3-201ENST00000379215 ONECUT3O60422 494 aaPredicted RBP31.2■■■□□ 2.58
ECHDC3-201ENST00000379215 PIGBQ92521 554 aa31.2■■■□□ 2.58
ECHDC3-201ENST00000379215 TNNQ9UQP3 1299 aa31.2■■■□□ 2.58
ECHDC3-201ENST00000379215 KCPQ6ZWJ8 1503 aa31.19■■■□□ 2.58
ECHDC3-201ENST00000379215 DOT1LQ8TEK3 1739 aa31.19■■■□□ 2.58
ECHDC3-201ENST00000379215 NECTIN2Q92692 538 aa31.19■■■□□ 2.58
ECHDC3-201ENST00000379215 FLIIQ13045 1269 aa31.18■■■□□ 2.58
ECHDC3-201ENST00000379215 ZNF772Q68DY9 489 aaPredicted RBP31.18■■■□□ 2.58
ECHDC3-201ENST00000379215 ITPRIPQ8IWB1 547 aa31.18■■■□□ 2.58
ECHDC3-201ENST00000379215 QTRT2Q9H974 415 aaKnown RBP31.18■■■□□ 2.58
ECHDC3-201ENST00000379215 ITGB4P16144 1822 aa31.18■■■□□ 2.58
ECHDC3-201ENST00000379215 TMEM57Q8N5G2 664 aa31.17■■■□□ 2.58
ECHDC3-201ENST00000379215 CHPF2Q9P2E5 772 aa31.16■■■□□ 2.58
ECHDC3-201ENST00000379215 VSIG10Q8N0Z9 540 aa31.16■■■□□ 2.58
ECHDC3-201ENST00000379215 HYPKQ9NX55 129 aa31.16■■■□□ 2.58
ECHDC3-201ENST00000379215 ERBB4Q15303 1308 aa31.15■■■□□ 2.58
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms