RNA–Protein interactions for RNA: ENST00000378752.7

OPTN-204, Transcript of optineurin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene OPTN, Length 3,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OPTN-204ENST00000378752 PPP4R3BQ5MIZ7 849 aa11.06□□□□□ -0.64
OPTN-204ENST00000378752 JAKMIP1Q96N16 626 aaKnown RBP11.06□□□□□ -0.64
OPTN-204ENST00000378752 SRCIN1Q9C0H9 1055 aa11.06□□□□□ -0.64
OPTN-204ENST00000378752 SHPRHQ149N8 1683 aa11.06□□□□□ -0.64
OPTN-204ENST00000378752 NCOA3Q9Y6Q9 1424 aa11.06□□□□□ -0.64
OPTN-204ENST00000378752 DNM1Q05193 864 aaKnown RBP11.05□□□□□ -0.64
OPTN-204ENST00000378752 NOLC1Q14978 699 aaKnown RBP eCLIP11.05□□□□□ -0.64
OPTN-204ENST00000378752 ZCCHC11Q5TAX3 1644 aaKnown RBP11.05□□□□□ -0.64
OPTN-204ENST00000378752 PRPF40BQ6NWY9 871 aaKnown RBP11.05□□□□□ -0.64
OPTN-204ENST00000378752 SIL1Q9H173 461 aa11.05□□□□□ -0.64
OPTN-204ENST00000378752 SLC52A1Q9NWF4 448 aa11.05□□□□□ -0.64
OPTN-204ENST00000378752 CHMLP26374 656 aa11.05□□□□□ -0.64
OPTN-204ENST00000378752 FLIIQ13045 1269 aa11.05□□□□□ -0.64
OPTN-204ENST00000378752 MAPK8IP2Q13387 824 aaPredicted RBP11.05□□□□□ -0.64
OPTN-204ENST00000378752 SLC26A8Q96RN1 970 aa11.05□□□□□ -0.64
OPTN-204ENST00000378752 RIMS2Q9UQ26 1411 aa11.05□□□□□ -0.64
OPTN-204ENST00000378752 AIMP1Q12904 312 aaKnown RBP11.04□□□□□ -0.64
OPTN-204ENST00000378752 BICD2Q8TD16 824 aa11.04□□□□□ -0.64
OPTN-204ENST00000378752 C16orf45Q96MC5 204 aaPredicted RBP11.04□□□□□ -0.64
OPTN-204ENST00000378752 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.04□□□□□ -0.64
OPTN-204ENST00000378752 CCDC61Q9Y6R9 512 aa11.04□□□□□ -0.64
OPTN-204ENST00000378752 RTL1A6NKG5 1358 aa11.04□□□□□ -0.64
OPTN-204ENST00000378752 MYOM2P54296 1465 aa11.04□□□□□ -0.64
OPTN-204ENST00000378752 TET3O43151 1660 aa11.04□□□□□ -0.64
OPTN-204ENST00000378752 WASLO00401 505 aaPredicted RBP11.04□□□□□ -0.64
OPTN-204ENST00000378752 HSP90B1P14625 803 aaKnown RBP11.04□□□□□ -0.64
OPTN-204ENST00000378752 HDGFL1Q5TGJ6 251 aa11.04□□□□□ -0.64
OPTN-204ENST00000378752 MAP7D2Q96T17 732 aa11.04□□□□□ -0.64
OPTN-204ENST00000378752 TRIM5Q9C035 493 aa11.04□□□□□ -0.64
OPTN-204ENST00000378752 YTHDC2Q9H6S0 1430 aaKnown RBP11.04□□□□□ -0.64
OPTN-204ENST00000378752 TULP4Q9NRJ4 1543 aa11.04□□□□□ -0.64
OPTN-204ENST00000378752 ASXL2Q76L83 1435 aa11.04□□□□□ -0.64
OPTN-204ENST00000378752 CCT4P50991 539 aaKnown RBP11.04□□□□□ -0.64
OPTN-204ENST00000378752 DYNC1I1O14576 645 aa11.03□□□□□ -0.64
OPTN-204ENST00000378752 GNAI3P08754 354 aa11.03□□□□□ -0.64
OPTN-204ENST00000378752 KIF3AQ9Y496 699 aa11.03□□□□□ -0.64
OPTN-204ENST00000378752 STX6O43752 255 aa11.03□□□□□ -0.64
OPTN-204ENST00000378752 BRD1O95696 1058 aa11.03□□□□□ -0.64
OPTN-204ENST00000378752 MCM2P49736 904 aa11.03□□□□□ -0.64
OPTN-204ENST00000378752 AK2P54819 239 aa11.03□□□□□ -0.64
OPTN-204ENST00000378752 MTHFSDQ2M296 383 aaKnown RBP11.03□□□□□ -0.64
OPTN-204ENST00000378752 PHAXQ9H814 394 aaKnown RBP11.03□□□□□ -0.64
OPTN-204ENST00000378752 GJB2P29033 226 aa11.03□□□□□ -0.64
OPTN-204ENST00000378752 NCBP3Q53F19 620 aaKnown RBP11.03□□□□□ -0.64
OPTN-204ENST00000378752 PPP1R42Q7Z4L9 355 aa11.03□□□□□ -0.64
OPTN-204ENST00000378752 LRRC7Q96NW7 1537 aa11.02□□□□□ -0.64
OPTN-204ENST00000378752 NLRP6P59044 892 aa11.02□□□□□ -0.65
OPTN-204ENST00000378752 CCDC183Q5T5S1 534 aa11.02□□□□□ -0.65
OPTN-204ENST00000378752 CYB5RLQ6IPT4 315 aa11.02□□□□□ -0.65
OPTN-204ENST00000378752 ZNF771Q7L3S4 317 aaPredicted RBP11.02□□□□□ -0.65
OPTN-204ENST00000378752 RBM33Q96EV2 1170 aaKnown RBP11.02□□□□□ -0.65
OPTN-204ENST00000378752 IL25Q9H293 177 aa11.02□□□□□ -0.65
OPTN-204ENST00000378752 C9orf78Q9NZ63 289 aaPredicted RBP11.02□□□□□ -0.65
OPTN-204ENST00000378752 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.02□□□□□ -0.65
OPTN-204ENST00000378752 V9GYY5 206 aaPredicted RBP11.02□□□□□ -0.65
OPTN-204ENST00000378752 MROH2AA6NES4 1674 aa11.02□□□□□ -0.65
OPTN-204ENST00000378752 ZNF500O60304 480 aaPredicted RBP11.02□□□□□ -0.65
OPTN-204ENST00000378752 KDM4AO75164 1064 aa11.02□□□□□ -0.65
OPTN-204ENST00000378752 SYT1P21579 422 aa11.02□□□□□ -0.65
OPTN-204ENST00000378752 CYP2E1P05181 493 aaPredicted RBP11.01□□□□□ -0.65
OPTN-204ENST00000378752 LARP1BQ659C4 914 aaKnown RBP11.01□□□□□ -0.65
OPTN-204ENST00000378752 ZBTB9Q96C00 473 aa11.01□□□□□ -0.65
OPTN-204ENST00000378752 DDX11Q96FC9 970 aa11.01□□□□□ -0.65
OPTN-204ENST00000378752 IFIT2P09913 472 aaKnown RBP11.01□□□□□ -0.65
OPTN-204ENST00000378752 CCDC30Q5VVM6 783 aa11.01□□□□□ -0.65
OPTN-204ENST00000378752 PDCL2Q8N4E4 241 aa11.01□□□□□ -0.65
OPTN-204ENST00000378752 ZNF853P0CG23 659 aa11.01□□□□□ -0.65
OPTN-204ENST00000378752 CNTROBQ8N137 903 aa11.01□□□□□ -0.65
OPTN-204ENST00000378752 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.01□□□□□ -0.65
OPTN-204ENST00000378752 GOLGA6L6A8MZA4 724 aa11□□□□□ -0.65
OPTN-204ENST00000378752 TAF7Q15545 349 aaPredicted RBP11□□□□□ -0.65
OPTN-204ENST00000378752 PDRG1Q9NUG6 133 aa11□□□□□ -0.65
OPTN-204ENST00000378752 PA2G4Q9UQ80 394 aaKnown RBP11□□□□□ -0.65
OPTN-204ENST00000378752 ATP6V1DQ9Y5K8 247 aa11□□□□□ -0.65
OPTN-204ENST00000378752 ZSCAN22P10073 491 aaPredicted RBP11□□□□□ -0.65
OPTN-204ENST00000378752 PTGS1P23219 599 aa11□□□□□ -0.65
OPTN-204ENST00000378752 LUZP1Q86V48 1076 aa11□□□□□ -0.65
OPTN-204ENST00000378752 RASEFQ8IZ41 740 aa11□□□□□ -0.65
OPTN-204ENST00000378752 PDLIM2Q96JY6 352 aa11□□□□□ -0.65
OPTN-204ENST00000378752 U2AF2P26368 475 aaKnown RBP eCLIP11□□□□□ -0.651e-6■■■■■ 28.8
OPTN-204ENST00000378752 CCDC8Q9H0W5 538 aaPredicted RBP11□□□□□ -0.65
OPTN-204ENST00000378752 CHL1O00533 1208 aa10.99□□□□□ -0.65
OPTN-204ENST00000378752 FILIP1Q7Z7B0 1213 aa10.99□□□□□ -0.65
OPTN-204ENST00000378752 FMNL2Q96PY5 1086 aa10.99□□□□□ -0.65
OPTN-204ENST00000378752 FAM135BQ49AJ0 1406 aa10.99□□□□□ -0.65
OPTN-204ENST00000378752 GLI2P10070 1586 aa10.99□□□□□ -0.65
OPTN-204ENST00000378752 H3BQV1 296 aa10.99□□□□□ -0.65
OPTN-204ENST00000378752 LARGE1O95461 756 aa10.99□□□□□ -0.65
OPTN-204ENST00000378752 ZKSCAN1P17029 563 aaPredicted RBP10.99□□□□□ -0.65
OPTN-204ENST00000378752 HS1BP3Q53T59 392 aa10.99□□□□□ -0.65
OPTN-204ENST00000378752 IFFO2Q5TF58 517 aa10.99□□□□□ -0.65
OPTN-204ENST00000378752 PYCARDQ9ULZ3 195 aa10.99□□□□□ -0.65
OPTN-204ENST00000378752 PTPRCP08575 1304 aa10.99□□□□□ -0.65
OPTN-204ENST00000378752 A0A087WWV3 80 aa10.99□□□□□ -0.65
OPTN-204ENST00000378752 TPD52L1Q16890 204 aaPredicted RBP10.99□□□□□ -0.65
OPTN-204ENST00000378752 LIMCH1Q9UPQ0 1083 aa10.99□□□□□ -0.65
OPTN-204ENST00000378752 EFCAB6Q5THR3 1501 aa10.99□□□□□ -0.65
OPTN-204ENST00000378752 POGZQ7Z3K3 1410 aa10.98□□□□□ -0.65
OPTN-204ENST00000378752 CFAP74Q9C0B2 1584 aa10.98□□□□□ -0.65
OPTN-204ENST00000378752 ACEP12821 1306 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 220.3 ms