RNA–Protein interactions for RNA: ENST00000376230.7

ZNF550-203, Transcript of zinc finger protein 550, humanhuman

TSL 1 (best)

Gene ZNF550, Length 3,719 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550-203ENST00000376230 SBNO2Q9Y2G9 1366 aa12.23□□□□□ -0.45
ZNF550-203ENST00000376230 ERC2O15083 957 aa12.22□□□□□ -0.45
ZNF550-203ENST00000376230 NBPF7P0C2Y1 421 aaPredicted RBP12.22□□□□□ -0.45
ZNF550-203ENST00000376230 PKP1Q13835 747 aa12.22□□□□□ -0.45
ZNF550-203ENST00000376230 NEXNQ0ZGT2 675 aa12.22□□□□□ -0.45
ZNF550-203ENST00000376230 TTC22Q5TAA0 569 aa12.22□□□□□ -0.45
ZNF550-203ENST00000376230 TOM1L2Q6ZVM7 507 aa12.22□□□□□ -0.45
ZNF550-203ENST00000376230 CLASP1Q7Z460 1538 aa12.22□□□□□ -0.45
ZNF550-203ENST00000376230 FERMT3Q86UX7 667 aa12.22□□□□□ -0.45
ZNF550-203ENST00000376230 CLASRPQ8N2M8 674 aaKnown RBP12.22□□□□□ -0.45
ZNF550-203ENST00000376230 ANKRD24Q8TF21 1146 aa12.22□□□□□ -0.45
ZNF550-203ENST00000376230 MAP3K2Q9Y2U5 619 aa12.22□□□□□ -0.45
ZNF550-203ENST00000376230 SETD1BQ9UPS6 1966 aaKnown RBP12.22□□□□□ -0.45
ZNF550-203ENST00000376230 KRT28Q7Z3Y7 464 aa12.22□□□□□ -0.45
ZNF550-203ENST00000376230 ANKRD44Q8N8A2 993 aa12.22□□□□□ -0.45
ZNF550-203ENST00000376230 SPHKAPQ2M3C7 1700 aa12.21□□□□□ -0.45
ZNF550-203ENST00000376230 PPRC1Q5VV67 1664 aaKnown RBP12.21□□□□□ -0.45
ZNF550-203ENST00000376230 CHL1O00533 1208 aa12.21□□□□□ -0.45
ZNF550-203ENST00000376230 FIBPO43427 364 aa12.21□□□□□ -0.45
ZNF550-203ENST00000376230 CEBPZQ03701 1054 aaKnown RBP12.21□□□□□ -0.45
ZNF550-203ENST00000376230 MYOM2P54296 1465 aa12.21□□□□□ -0.46
ZNF550-203ENST00000376230 TET3O43151 1660 aa12.21□□□□□ -0.46
ZNF550-203ENST00000376230 GOLGA6L4A6NEF3 574 aa12.21□□□□□ -0.46
ZNF550-203ENST00000376230 FSD1Q9BTV5 496 aa12.21□□□□□ -0.46
ZNF550-203ENST00000376230 PDE1AP54750 535 aa12.2□□□□□ -0.46
ZNF550-203ENST00000376230 MYD88Q99836 296 aa12.2□□□□□ -0.46
ZNF550-203ENST00000376230 PRDM11Q9NQV5 511 aa12.2□□□□□ -0.46
ZNF550-203ENST00000376230 NFATC2IPQ8NCF5 419 aa12.2□□□□□ -0.46
ZNF550-203ENST00000376230 GCP02774 474 aa12.2□□□□□ -0.46
ZNF550-203ENST00000376230 ZBTB3Q9H5J0 574 aa12.2□□□□□ -0.46
ZNF550-203ENST00000376230 TMEM2Q9UHN6 1383 aa12.19□□□□□ -0.46
ZNF550-203ENST00000376230 TULP4Q9NRJ4 1543 aa12.19□□□□□ -0.46
ZNF550-203ENST00000376230 FSD2A1L4K1 749 aa12.19□□□□□ -0.46
ZNF550-203ENST00000376230 NPHP1O15259 732 aa12.19□□□□□ -0.46
ZNF550-203ENST00000376230 PHF23Q9BUL5 403 aaPredicted RBP12.19□□□□□ -0.46
ZNF550-203ENST00000376230 DCTPP1Q9H773 170 aa12.19□□□□□ -0.46
ZNF550-203ENST00000376230 KIF1BO60333 1816 aa12.19□□□□□ -0.46
ZNF550-203ENST00000376230 DNAAF4Q8WXU2 420 aa12.19□□□□□ -0.46
ZNF550-203ENST00000376230 SKOR2Q2VWA4 1001 aaPredicted RBP12.19□□□□□ -0.46
ZNF550-203ENST00000376230 UNC5CLQ8IV45 518 aa12.18□□□□□ -0.46
ZNF550-203ENST00000376230 RABEP1Q15276 862 aa12.18□□□□□ -0.46
ZNF550-203ENST00000376230 PROSER3Q2NL68 480 aa12.18□□□□□ -0.46
ZNF550-203ENST00000376230 PRPF40BQ6NWY9 871 aaKnown RBP12.18□□□□□ -0.46
ZNF550-203ENST00000376230 PUS7Q96PZ0 661 aaKnown RBP12.18□□□□□ -0.46
ZNF550-203ENST00000376230 TOMM22Q9NS69 142 aa12.18□□□□□ -0.46
ZNF550-203ENST00000376230 CABP4P57796 275 aa12.17□□□□□ -0.46
ZNF550-203ENST00000376230 EDC3Q96F86 508 aaKnown RBP12.17□□□□□ -0.46
ZNF550-203ENST00000376230 TATP17735 454 aaPredicted RBP12.17□□□□□ -0.46
ZNF550-203ENST00000376230 EDC4Q6P2E9 1401 aaKnown RBP12.17□□□□□ -0.46
ZNF550-203ENST00000376230 KIDINS220Q9ULH0 1771 aa12.17□□□□□ -0.46
ZNF550-203ENST00000376230 UBE3BQ7Z3V4 1068 aa12.16□□□□□ -0.46
ZNF550-203ENST00000376230 RAB11FIP4Q86YS3 637 aa12.16□□□□□ -0.46
ZNF550-203ENST00000376230 GPATCH3Q96I76 525 aa12.16□□□□□ -0.46
ZNF550-203ENST00000376230 SNRKQ9NRH2 765 aa12.16□□□□□ -0.46
ZNF550-203ENST00000376230 HECW2Q9P2P5 1572 aa12.16□□□□□ -0.46
ZNF550-203ENST00000376230 JAKMIP1Q96N16 626 aaKnown RBP12.16□□□□□ -0.46
ZNF550-203ENST00000376230 LRRC2Q9BYS8 371 aa12.16□□□□□ -0.46
ZNF550-203ENST00000376230 RRP9O43818 475 aaKnown RBP12.16□□□□□ -0.46
ZNF550-203ENST00000376230 DDX58O95786 925 aaKnown RBP12.16□□□□□ -0.46
ZNF550-203ENST00000376230 COPS6Q7L5N1 327 aa12.16□□□□□ -0.46
ZNF550-203ENST00000376230 ARHGAP45Q92619 1136 aa12.16□□□□□ -0.46
ZNF550-203ENST00000376230 NEO1Q92859 1461 aa12.16□□□□□ -0.46
ZNF550-203ENST00000376230 BAG4O95429 457 aaKnown RBP12.15□□□□□ -0.46
ZNF550-203ENST00000376230 NECAB1Q8N987 351 aa12.15□□□□□ -0.46
ZNF550-203ENST00000376230 GLI2P10070 1586 aa12.15□□□□□ -0.46
ZNF550-203ENST00000376230 SYCE3A1L190 88 aa12.15□□□□□ -0.46
ZNF550-203ENST00000376230 NUTM2BA6NNL0 878 aaPredicted RBP12.15□□□□□ -0.46
ZNF550-203ENST00000376230 NUTM2EB1AL46 878 aaPredicted RBP12.15□□□□□ -0.46
ZNF550-203ENST00000376230 CASTP20810 708 aaKnown RBP12.15□□□□□ -0.46
ZNF550-203ENST00000376230 NUTM2AQ8IVF1 878 aaPredicted RBP12.15□□□□□ -0.46
ZNF550-203ENST00000376230 CCDC83Q8IWF9 413 aa12.15□□□□□ -0.46
ZNF550-203ENST00000376230 FLT4P35916 1363 aa12.15□□□□□ -0.46
ZNF550-203ENST00000376230 RHPN1Q8TCX5 695 aa12.15□□□□□ -0.46
ZNF550-203ENST00000376230 DDX11Q96FC9 970 aa12.15□□□□□ -0.46
ZNF550-203ENST00000376230 PALD1Q9ULE6 856 aa12.15□□□□□ -0.46
ZNF550-203ENST00000376230 SMC3Q9UQE7 1217 aa12.15□□□□□ -0.46
ZNF550-203ENST00000376230 GPTP24298 496 aa12.14□□□□□ -0.47
ZNF550-203ENST00000376230 CNTROBQ8N137 903 aa12.14□□□□□ -0.47
ZNF550-203ENST00000376230 XAGE3Q8WTP9 111 aa12.14□□□□□ -0.47
ZNF550-203ENST00000376230 RAB3GAP1Q15042 981 aa12.14□□□□□ -0.47
ZNF550-203ENST00000376230 HSP90AB3PQ58FF7 597 aa12.14□□□□□ -0.47
ZNF550-203ENST00000376230 APPP05067 770 aa12.13□□□□□ -0.47
ZNF550-203ENST00000376230 FKBP4Q02790 459 aaKnown RBP eCLIP12.13□□□□□ -0.47
ZNF550-203ENST00000376230 CCDC173Q0VFZ6 552 aa12.13□□□□□ -0.47
ZNF550-203ENST00000376230 TBX22Q9Y458 520 aa12.13□□□□□ -0.47
ZNF550-203ENST00000376230 SHROOM2Q13796 1616 aa12.13□□□□□ -0.47
ZNF550-203ENST00000376230 WASHC4Q2M389 1173 aa12.13□□□□□ -0.47
ZNF550-203ENST00000376230 ZSCAN30Q86W11 494 aa12.13□□□□□ -0.47
ZNF550-203ENST00000376230 A2ML1A8K2U0 1454 aa12.13□□□□□ -0.47
ZNF550-203ENST00000376230 DRC7Q8IY82 874 aa12.13□□□□□ -0.47
ZNF550-203ENST00000376230 USP44Q9H0E7 712 aa12.13□□□□□ -0.47
ZNF550-203ENST00000376230 PPP6R1Q9UPN7 881 aa12.13□□□□□ -0.47
ZNF550-203ENST00000376230 PTPRCP08575 1304 aa12.12□□□□□ -0.47
ZNF550-203ENST00000376230 PLEKHG3A1L390 1219 aa12.12□□□□□ -0.47
ZNF550-203ENST00000376230 ZKSCAN1P17029 563 aaPredicted RBP12.12□□□□□ -0.47
ZNF550-203ENST00000376230 ADGRB3O60242 1522 aa12.12□□□□□ -0.47
ZNF550-203ENST00000376230 A0A087WZG4 1122 aa12.12□□□□□ -0.47
ZNF550-203ENST00000376230 ZNF853P0CG23 659 aa12.12□□□□□ -0.47
ZNF550-203ENST00000376230 TMX3Q96JJ7 454 aa12.12□□□□□ -0.47
ZNF550-203ENST00000376230 USP26Q9BXU7 913 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 729.6 ms