RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 LGR6Q9HBX8 967 aa17.36■□□□□ 0.37
MSH5-202ENST00000375740 PLEKHM2Q8IWE5 1019 aa17.35■□□□□ 0.37
MSH5-202ENST00000375740 C16orf71Q8IYS4 520 aaPredicted RBP17.35■□□□□ 0.37
MSH5-202ENST00000375740 HSP90AA2PQ14568 343 aaPredicted RBP17.35■□□□□ 0.37
MSH5-202ENST00000375740 FKBP5Q13451 457 aaPredicted RBP17.34■□□□□ 0.37
MSH5-202ENST00000375740 SOS1Q07889 1333 aaPredicted RBP17.34■□□□□ 0.37
MSH5-202ENST00000375740 PHRF1Q9P1Y6 1649 aaKnown RBP17.34■□□□□ 0.37
MSH5-202ENST00000375740 C19orf44Q9H6X5 657 aa17.34■□□□□ 0.37
MSH5-202ENST00000375740 CEMIPQ8WUJ3 1361 aa17.34■□□□□ 0.37
MSH5-202ENST00000375740 SPRYD3Q8NCJ5 442 aa17.34■□□□□ 0.37
MSH5-202ENST00000375740 FAM208AQ9UK61 1670 aaKnown RBP17.33■□□□□ 0.36
MSH5-202ENST00000375740 SLIT3O75094 1523 aa17.32■□□□□ 0.36
MSH5-202ENST00000375740 APBB1O00213 710 aa17.32■□□□□ 0.36
MSH5-202ENST00000375740 RBM25P49756 843 aaKnown RBP17.32■□□□□ 0.36
MSH5-202ENST00000375740 PLEKHO1Q53GL0 409 aaPredicted RBP17.32■□□□□ 0.36
MSH5-202ENST00000375740 TBC1D9Q6ZT07 1266 aa17.32■□□□□ 0.36
MSH5-202ENST00000375740 C1orf167Q5SNV9 1468 aa17.32■□□□□ 0.36
MSH5-202ENST00000375740 SMARCA5O60264 1052 aaPredicted RBP17.32■□□□□ 0.36
MSH5-202ENST00000375740 GSPT1P15170 499 aaKnown RBP17.32■□□□□ 0.36
MSH5-202ENST00000375740 CLCN1P35523 988 aa17.32■□□□□ 0.36
MSH5-202ENST00000375740 ZNF530Q6P9A1 599 aaPredicted RBP17.32■□□□□ 0.36
MSH5-202ENST00000375740 ANKRD24Q8TF21 1146 aa17.32■□□□□ 0.36
MSH5-202ENST00000375740 AKAP4Q5JQC9 854 aa17.31■□□□□ 0.36
MSH5-202ENST00000375740 HDGFL1Q5TGJ6 251 aa17.31■□□□□ 0.36
MSH5-202ENST00000375740 TRPM3Q9HCF6 1732 aaPredicted RBP17.31■□□□□ 0.36
MSH5-202ENST00000375740 CACNA1FO60840 1977 aa17.31■□□□□ 0.36
MSH5-202ENST00000375740 HSP90AA1P07900 732 aaKnown RBP17.31■□□□□ 0.36
MSH5-202ENST00000375740 AXIN2Q9Y2T1 843 aa17.31■□□□□ 0.36
MSH5-202ENST00000375740 GOLGA6L3A6NEY3 463 aa17.3■□□□□ 0.36
MSH5-202ENST00000375740 HMMRO75330 724 aa17.3■□□□□ 0.36
MSH5-202ENST00000375740 GNAI2P04899 355 aa17.3■□□□□ 0.36
MSH5-202ENST00000375740 MPRIPQ6WCQ1 1025 aa17.3■□□□□ 0.36
MSH5-202ENST00000375740 OTUD7AQ8TE49 926 aaPredicted RBP17.3■□□□□ 0.36
MSH5-202ENST00000375740 FSD2A1L4K1 749 aa17.3■□□□□ 0.36
MSH5-202ENST00000375740 EIF4A1P60842 406 aaKnown RBP17.3■□□□□ 0.36
MSH5-202ENST00000375740 TTC22Q5TAA0 569 aa17.29■□□□□ 0.36
MSH5-202ENST00000375740 PHAXQ9H814 394 aaKnown RBP17.29■□□□□ 0.36
MSH5-202ENST00000375740 KCNQ3O43525 872 aa17.29■□□□□ 0.36
MSH5-202ENST00000375740 CDC45O75419 566 aa17.29■□□□□ 0.36
MSH5-202ENST00000375740 AMOTQ4VCS5 1084 aa17.29■□□□□ 0.36
MSH5-202ENST00000375740 EIF2S2P20042 333 aaKnown RBP17.28■□□□□ 0.36
MSH5-202ENST00000375740 TEFQ10587 303 aa17.28■□□□□ 0.36
MSH5-202ENST00000375740 GNAI3P08754 354 aa17.28■□□□□ 0.36
MSH5-202ENST00000375740 MED1Q15648 1581 aaPredicted RBP17.27■□□□□ 0.36
MSH5-202ENST00000375740 LMO7Q8WWI1 1683 aa17.27■□□□□ 0.36
MSH5-202ENST00000375740 KIF1AQ12756 1690 aa17.27■□□□□ 0.36
MSH5-202ENST00000375740 BTBD11A6QL63 1104 aa17.27■□□□□ 0.35
MSH5-202ENST00000375740 ATF3P18847 181 aa17.27■□□□□ 0.35
MSH5-202ENST00000375740 RRP9O43818 475 aaKnown RBP17.26■□□□□ 0.35
MSH5-202ENST00000375740 ZC3H6P61129 1189 aaKnown RBP17.26■□□□□ 0.35
MSH5-202ENST00000375740 C1orf141Q5JVX7 400 aa17.26■□□□□ 0.35
MSH5-202ENST00000375740 NCAPD2Q15021 1401 aa17.26■□□□□ 0.35
MSH5-202ENST00000375740 RNMTO43148 476 aaKnown RBP17.26■□□□□ 0.35
MSH5-202ENST00000375740 DDX17Q92841 729 aaKnown RBP17.25■□□□□ 0.35
MSH5-202ENST00000375740 KDM3BQ7LBC6 1761 aa17.25■□□□□ 0.35
MSH5-202ENST00000375740 TMEM94Q12767 1356 aa17.25■□□□□ 0.35
MSH5-202ENST00000375740 ATP8B2P98198 1209 aa17.25■□□□□ 0.35
MSH5-202ENST00000375740 RGPD5Q99666 1765 aa17.25■□□□□ 0.35
MSH5-202ENST00000375740 KIF2CQ99661 725 aa17.24■□□□□ 0.35
MSH5-202ENST00000375740 USP44Q9H0E7 712 aa17.24■□□□□ 0.35
MSH5-202ENST00000375740 PXDNQ92626 1479 aa17.24■□□□□ 0.35
MSH5-202ENST00000375740 ERBB4Q15303 1308 aa17.24■□□□□ 0.35
MSH5-202ENST00000375740 PNMA6EA0A0J9YXQ4 647 aa17.24■□□□□ 0.35
MSH5-202ENST00000375740 HOXB7P09629 217 aa17.24■□□□□ 0.35
MSH5-202ENST00000375740 HSCBQ8IWL3 235 aa17.24■□□□□ 0.35
MSH5-202ENST00000375740 EXOC6BQ9Y2D4 811 aa17.24■□□□□ 0.35
MSH5-202ENST00000375740 MCM4P33991 863 aa17.24■□□□□ 0.35
MSH5-202ENST00000375740 CHPF2Q9P2E5 772 aa17.24■□□□□ 0.35
MSH5-202ENST00000375740 LRRFIP2Q9Y608 721 aaKnown RBP17.24■□□□□ 0.35
MSH5-202ENST00000375740 MST1RQ04912 1400 aa17.23■□□□□ 0.35
MSH5-202ENST00000375740 SDSP20132 328 aa17.23■□□□□ 0.35
MSH5-202ENST00000375740 SNX21Q969T3 373 aa17.23■□□□□ 0.35
MSH5-202ENST00000375740 PXDNLA1KZ92 1463 aa17.22■□□□□ 0.35
MSH5-202ENST00000375740 STRCP1A6NGW2 1772 aa17.22■□□□□ 0.35
MSH5-202ENST00000375740 ALS2Q96Q42 1657 aa17.22■□□□□ 0.35
MSH5-202ENST00000375740 UBTFL1P0CB47 393 aaPredicted RBP17.21■□□□□ 0.35
MSH5-202ENST00000375740 CHMP4AQ9BY43 222 aa17.21■□□□□ 0.35
MSH5-202ENST00000375740 N4BP2Q86UW6 1770 aaPredicted RBP17.21■□□□□ 0.35
MSH5-202ENST00000375740 ERBB3P21860 1342 aa17.21■□□□□ 0.35
MSH5-202ENST00000375740 ANXA1P04083 346 aa17.21■□□□□ 0.35
MSH5-202ENST00000375740 SRCIN1Q9C0H9 1055 aa17.21■□□□□ 0.35
MSH5-202ENST00000375740 CAMTA1Q9Y6Y1 1673 aa17.2■□□□□ 0.34
MSH5-202ENST00000375740 PDE1AP54750 535 aa17.2■□□□□ 0.34
MSH5-202ENST00000375740 OSBPL3Q9H4L5 887 aa17.2■□□□□ 0.34
MSH5-202ENST00000375740 PI4KAP2A4QPH2 592 aa17.19■□□□□ 0.34
MSH5-202ENST00000375740 TRAK2O60296 914 aa17.19■□□□□ 0.34
MSH5-202ENST00000375740 PI4KAP1Q8N8J0 262 aa17.19■□□□□ 0.34
MSH5-202ENST00000375740 LRRCC1Q9C099 1032 aa17.19■□□□□ 0.34
MSH5-202ENST00000375740 CABLES1Q8TDN4 633 aa17.18■□□□□ 0.34
MSH5-202ENST00000375740 DNAAF4Q8WXU2 420 aa17.18■□□□□ 0.34
MSH5-202ENST00000375740 RBM42Q9BTD8 480 aaKnown RBP17.18■□□□□ 0.34
MSH5-202ENST00000375740 NLRP2Q9NX02 1062 aa17.18■□□□□ 0.34
MSH5-202ENST00000375740 OVOS2A0A0G2JMS6 1433 aa17.18■□□□□ 0.34
MSH5-202ENST00000375740 GIGYF1O75420 1035 aaPredicted RBP17.18■□□□□ 0.34
MSH5-202ENST00000375740 HSPA2P54652 639 aa17.18■□□□□ 0.34
MSH5-202ENST00000375740 BEND3Q5T5X7 828 aa17.17■□□□□ 0.34
MSH5-202ENST00000375740 CHMP5Q9NZZ3 219 aa17.17■□□□□ 0.34
MSH5-202ENST00000375740 IBTKQ9P2D0 1353 aaPredicted RBP17.17■□□□□ 0.34
MSH5-202ENST00000375740 ESPNB1AK53 854 aa17.17■□□□□ 0.34
MSH5-202ENST00000375740 CADPS2Q86UW7 1296 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms