RNA–Protein interactions for RNA: ENST00000375608.7

MCF2L-204, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5 BASIC

Gene MCF2L, Length 3,648 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-204ENST00000375608 PNMA6EA0A0J9YXQ4 647 aa16.47■□□□□ 0.23
MCF2L-204ENST00000375608 STX6O43752 255 aa16.47■□□□□ 0.23
MCF2L-204ENST00000375608 PRPF40BQ6NWY9 871 aaKnown RBP16.47■□□□□ 0.23
MCF2L-204ENST00000375608 TRPM2O94759 1503 aa16.47■□□□□ 0.23
MCF2L-204ENST00000375608 UNC5CLQ8IV45 518 aa16.47■□□□□ 0.23
MCF2L-204ENST00000375608 SBNO2Q9Y2G9 1366 aa16.47■□□□□ 0.23
MCF2L-204ENST00000375608 CHMLP26374 656 aa16.46■□□□□ 0.23
MCF2L-204ENST00000375608 IL13P35225 146 aa16.46■□□□□ 0.23
MCF2L-204ENST00000375608 LARP1BQ659C4 914 aaKnown RBP16.46■□□□□ 0.23
MCF2L-204ENST00000375608 BRD1O95696 1058 aa16.46■□□□□ 0.23
MCF2L-204ENST00000375608 UNC13BO14795 1591 aa16.46■□□□□ 0.23
MCF2L-204ENST00000375608 ZKSCAN1P17029 563 aaPredicted RBP16.46■□□□□ 0.23
MCF2L-204ENST00000375608 TPD52L1Q16890 204 aaPredicted RBP16.46■□□□□ 0.23
MCF2L-204ENST00000375608 FAM184AQ8NB25 1140 aa16.46■□□□□ 0.23
MCF2L-204ENST00000375608 CDK11BP21127 795 aaKnown RBP16.45■□□□□ 0.22
MCF2L-204ENST00000375608 SLC52A1Q9NWF4 448 aa16.45■□□□□ 0.22
MCF2L-204ENST00000375608 GOLGA6L19H0YKK7 550 aa16.45■□□□□ 0.22
MCF2L-204ENST00000375608 IFIT2P09913 472 aaKnown RBP16.45■□□□□ 0.22
MCF2L-204ENST00000375608 CCDC192P0DO97 292 aa16.45■□□□□ 0.22
MCF2L-204ENST00000375608 FLIIQ13045 1269 aa16.45■□□□□ 0.22
MCF2L-204ENST00000375608 C9orf78Q9NZ63 289 aaPredicted RBP16.45■□□□□ 0.22
MCF2L-204ENST00000375608 BECN2A8MW95 431 aa16.44■□□□□ 0.22
MCF2L-204ENST00000375608 GJB2P29033 226 aa16.44■□□□□ 0.22
MCF2L-204ENST00000375608 HDGFL1Q5TGJ6 251 aa16.44■□□□□ 0.22
MCF2L-204ENST00000375608 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.44■□□□□ 0.22
MCF2L-204ENST00000375608 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.44■□□□□ 0.224e-7■■□□□ 14
MCF2L-204ENST00000375608 NCOA3Q9Y6Q9 1424 aa16.44■□□□□ 0.22
MCF2L-204ENST00000375608 V9GYY5 206 aaPredicted RBP16.44■□□□□ 0.22
MCF2L-204ENST00000375608 H3BQV1 296 aa16.44■□□□□ 0.22
MCF2L-204ENST00000375608 IFFO2Q5TF58 517 aa16.44■□□□□ 0.22
MCF2L-204ENST00000375608 CNTROBQ8N137 903 aa16.44■□□□□ 0.22
MCF2L-204ENST00000375608 SYT1P21579 422 aa16.44■□□□□ 0.22
MCF2L-204ENST00000375608 EIF4A2Q14240 407 aaKnown RBP16.44■□□□□ 0.22
MCF2L-204ENST00000375608 FILIP1Q7Z7B0 1213 aa16.44■□□□□ 0.22
MCF2L-204ENST00000375608 PDLIM2Q96JY6 352 aa16.44■□□□□ 0.22
MCF2L-204ENST00000375608 CCDC94Q9BW85 323 aaPredicted RBP16.44■□□□□ 0.22
MCF2L-204ENST00000375608 CCDC61Q9Y6R9 512 aa16.44■□□□□ 0.22
MCF2L-204ENST00000375608 U2AF2P26368 475 aaKnown RBP eCLIP16.43■□□□□ 0.222e-7■■□□□ 11.9
MCF2L-204ENST00000375608 AK2P54819 239 aa16.43■□□□□ 0.22
MCF2L-204ENST00000375608 CCDC30Q5VVM6 783 aa16.43■□□□□ 0.22
MCF2L-204ENST00000375608 ZSCAN22P10073 491 aaPredicted RBP16.43■□□□□ 0.22
MCF2L-204ENST00000375608 SIL1Q9H173 461 aa16.43■□□□□ 0.22
MCF2L-204ENST00000375608 TNMDQ9H2S6 317 aa16.43■□□□□ 0.22
MCF2L-204ENST00000375608 PDRG1Q9NUG6 133 aa16.43■□□□□ 0.22
MCF2L-204ENST00000375608 PTGS1P23219 599 aa16.42■□□□□ 0.22
MCF2L-204ENST00000375608 AIMP1Q12904 312 aaKnown RBP16.42■□□□□ 0.22
MCF2L-204ENST00000375608 FMNL2Q96PY5 1086 aa16.42■□□□□ 0.22
MCF2L-204ENST00000375608 IQSEC2Q5JU85 1478 aa16.42■□□□□ 0.22
MCF2L-204ENST00000375608 CCDC186Q7Z3E2 898 aa16.42■□□□□ 0.22
MCF2L-204ENST00000375608 LIMCH1Q9UPQ0 1083 aa16.42■□□□□ 0.22
MCF2L-204ENST00000375608 CYP2E1P05181 493 aaPredicted RBP16.42■□□□□ 0.22
MCF2L-204ENST00000375608 PPP1R42Q7Z4L9 355 aa16.42■□□□□ 0.22
MCF2L-204ENST00000375608 MYRIPQ8NFW9 859 aa16.42■□□□□ 0.22
MCF2L-204ENST00000375608 DDX11Q96FC9 970 aa16.42■□□□□ 0.22
MCF2L-204ENST00000375608 LAMC1P11047 1609 aa16.41■□□□□ 0.22
MCF2L-204ENST00000375608 RTL1A6NKG5 1358 aa16.41■□□□□ 0.22
MCF2L-204ENST00000375608 LUZP1Q86V48 1076 aa16.41■□□□□ 0.22
MCF2L-204ENST00000375608 NUP62CLQ9H1M0 184 aa16.41■□□□□ 0.22
MCF2L-204ENST00000375608 CYP46A1Q9Y6A2 500 aa16.41■□□□□ 0.22
MCF2L-204ENST00000375608 NPATQ14207 1427 aa16.41■□□□□ 0.22
MCF2L-204ENST00000375608 UBE2HP62256 183 aa16.41■□□□□ 0.22
MCF2L-204ENST00000375608 USHBP1Q8N6Y0 703 aa16.41■□□□□ 0.22
MCF2L-204ENST00000375608 RIOK3O14730 519 aaKnown RBP16.4■□□□□ 0.22
MCF2L-204ENST00000375608 TRMT1Q9NXH9 659 aaKnown RBP16.4■□□□□ 0.22
MCF2L-204ENST00000375608 WASLO00401 505 aaPredicted RBP16.4■□□□□ 0.22
MCF2L-204ENST00000375608 CLASRPQ8N2M8 674 aaKnown RBP16.4■□□□□ 0.22
MCF2L-204ENST00000375608 RUFY2Q8WXA3 655 aa16.4■□□□□ 0.22
MCF2L-204ENST00000375608 PIBF1Q8WXW3 757 aa16.4■□□□□ 0.22
MCF2L-204ENST00000375608 IBTKQ9P2D0 1353 aaPredicted RBP16.4■□□□□ 0.22
MCF2L-204ENST00000375608 KDM4AO75164 1064 aa16.39■□□□□ 0.21
MCF2L-204ENST00000375608 LETM1O95202 739 aaPredicted RBP16.39■□□□□ 0.21
MCF2L-204ENST00000375608 BCL2L12Q9HB09 334 aa16.39■□□□□ 0.21
MCF2L-204ENST00000375608 PTPRCP08575 1304 aa16.39■□□□□ 0.21
MCF2L-204ENST00000375608 TERF1P54274 439 aa16.39■□□□□ 0.21
MCF2L-204ENST00000375608 KRT85P78386 507 aa16.39■□□□□ 0.21
MCF2L-204ENST00000375608 PRIMPOLQ96LW4 560 aa16.39■□□□□ 0.21
MCF2L-204ENST00000375608 NLRP6P59044 892 aa16.39■□□□□ 0.21
MCF2L-204ENST00000375608 MAP3K11Q16584 847 aa16.39■□□□□ 0.21
MCF2L-204ENST00000375608 PYCARDQ9ULZ3 195 aa16.39■□□□□ 0.21
MCF2L-204ENST00000375608 ERICH4A6NGS2 130 aa16.38■□□□□ 0.21
MCF2L-204ENST00000375608 GPATCH3Q96I76 525 aa16.38■□□□□ 0.21
MCF2L-204ENST00000375608 CGNQ9P2M7 1197 aaKnown RBP16.38■□□□□ 0.21
MCF2L-204ENST00000375608 RIMS2Q9UQ26 1411 aa16.38■□□□□ 0.21
MCF2L-204ENST00000375608 F13A1P00488 732 aa16.38■□□□□ 0.21
MCF2L-204ENST00000375608 TNNT1P13805 278 aa16.38■□□□□ 0.21
MCF2L-204ENST00000375608 TAF7Q15545 349 aaPredicted RBP16.38■□□□□ 0.21
MCF2L-204ENST00000375608 GORABQ5T7V8 394 aa16.38■□□□□ 0.21
MCF2L-204ENST00000375608 CCDC112Q8NEF3 446 aa16.38■□□□□ 0.21
MCF2L-204ENST00000375608 IQGAP1P46940 1657 aa16.38■□□□□ 0.21
MCF2L-204ENST00000375608 ATP7AQ04656 1500 aa16.38■□□□□ 0.21
MCF2L-204ENST00000375608 MTHFSDQ2M296 383 aaKnown RBP16.38■□□□□ 0.21
MCF2L-204ENST00000375608 NCBP3Q53F19 620 aaKnown RBP16.38■□□□□ 0.21
MCF2L-204ENST00000375608 AEBP2Q6ZN18 517 aaPredicted RBP16.38■□□□□ 0.21
MCF2L-204ENST00000375608 CLEC17AQ6ZS10 378 aa16.38■□□□□ 0.21
MCF2L-204ENST00000375608 SPATA32Q96LK8 384 aa16.38■□□□□ 0.21
MCF2L-204ENST00000375608 RAB11FIP3O75154 756 aa16.37■□□□□ 0.21
MCF2L-204ENST00000375608 LRMPQ12912 555 aa16.37■□□□□ 0.21
MCF2L-204ENST00000375608 TRERF1Q96PN7 1200 aa16.37■□□□□ 0.21
MCF2L-204ENST00000375608 PLXNC1O60486 1568 aa16.37■□□□□ 0.21
MCF2L-204ENST00000375608 FSD1Q9BTV5 496 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms