RNA–Protein interactions for RNA: ENST00000374876.4

CCDC40-202, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best) BASIC

Gene CCDC40, Length 2,010 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-202ENST00000374876 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.88■□□□□ 0.77
CCDC40-202ENST00000374876 KAT6BQ8WYB5 2073 aa19.87■□□□□ 0.77
CCDC40-202ENST00000374876 COG6Q9Y2V7 657 aa19.87■□□□□ 0.77
CCDC40-202ENST00000374876 KCNQ2O43526 872 aa19.86■□□□□ 0.77
CCDC40-202ENST00000374876 PHACTR3Q96KR7 559 aa19.86■□□□□ 0.77
CCDC40-202ENST00000374876 PNNQ9H307 717 aaKnown RBP19.86■□□□□ 0.77
CCDC40-202ENST00000374876 TMPOP42166 694 aaKnown RBP19.86■□□□□ 0.77
CCDC40-202ENST00000374876 AMOTQ4VCS5 1084 aa19.86■□□□□ 0.77
CCDC40-202ENST00000374876 CLUAP1Q96AJ1 413 aa19.86■□□□□ 0.77
CCDC40-202ENST00000374876 PKD1L3Q7Z443 1732 aa19.85■□□□□ 0.77
CCDC40-202ENST00000374876 FCHSD2O94868 740 aa19.85■□□□□ 0.77
CCDC40-202ENST00000374876 ZNF530Q6P9A1 599 aaPredicted RBP19.85■□□□□ 0.77
CCDC40-202ENST00000374876 PHKG2P15735 406 aa19.85■□□□□ 0.77
CCDC40-202ENST00000374876 MTHFSDQ2M296 383 aaKnown RBP19.85■□□□□ 0.77
CCDC40-202ENST00000374876 IFNL2Q8IZJ0 200 aa19.85■□□□□ 0.77
CCDC40-202ENST00000374876 BCL2L13Q9BXK5 485 aa19.83■□□□□ 0.77
CCDC40-202ENST00000374876 AAMPQ13685 434 aa19.83■□□□□ 0.76
CCDC40-202ENST00000374876 SYTL4Q96C24 671 aaPredicted RBP19.83■□□□□ 0.76
CCDC40-202ENST00000374876 CT47B1P0C2W7 299 aaPredicted RBP19.82■□□□□ 0.76
CCDC40-202ENST00000374876 PRIM1P49642 420 aaKnown RBP19.82■□□□□ 0.76
CCDC40-202ENST00000374876 TRIM35Q9UPQ4 493 aa19.82■□□□□ 0.76
CCDC40-202ENST00000374876 RGS3P49796 1198 aa19.81■□□□□ 0.76
CCDC40-202ENST00000374876 SF3B2Q13435 895 aaKnown RBP19.81■□□□□ 0.76
CCDC40-202ENST00000374876 SBF2Q86WG5 1849 aa19.81■□□□□ 0.76
CCDC40-202ENST00000374876 IGHDP01880 384 aa19.81■□□□□ 0.76
CCDC40-202ENST00000374876 FAM161AQ3B820 660 aa19.81■□□□□ 0.76
CCDC40-202ENST00000374876 C1orf141Q5JVX7 400 aa19.81■□□□□ 0.76
CCDC40-202ENST00000374876 DEFB132Q7Z7B7 95 aa19.81■□□□□ 0.76
CCDC40-202ENST00000374876 BCL9O00512 1426 aa19.81■□□□□ 0.76
CCDC40-202ENST00000374876 APBA3O96018 575 aa19.8■□□□□ 0.76
CCDC40-202ENST00000374876 RIPK4P57078 832 aa19.8■□□□□ 0.76
CCDC40-202ENST00000374876 NKX1-1Q15270 411 aaPredicted RBP19.8■□□□□ 0.76
CCDC40-202ENST00000374876 MPRIPQ6WCQ1 1025 aa19.8■□□□□ 0.76
CCDC40-202ENST00000374876 CCDC125Q86Z20 511 aa19.8■□□□□ 0.76
CCDC40-202ENST00000374876 TSR2Q969E8 191 aaKnown RBP19.8■□□□□ 0.76
CCDC40-202ENST00000374876 BCL11BQ9C0K0 894 aaPredicted RBP19.8■□□□□ 0.76
CCDC40-202ENST00000374876 IL16Q14005 1332 aa19.79■□□□□ 0.76
CCDC40-202ENST00000374876 PLEKHG2Q9H7P9 1386 aa19.79■□□□□ 0.76
CCDC40-202ENST00000374876 NEFMP07197 916 aa19.78■□□□□ 0.76
CCDC40-202ENST00000374876 RLBP1P12271 317 aa19.78■□□□□ 0.76
CCDC40-202ENST00000374876 AKAP4Q5JQC9 854 aa19.78■□□□□ 0.76
CCDC40-202ENST00000374876 EN1Q05925 392 aaPredicted RBP19.77■□□□□ 0.76
CCDC40-202ENST00000374876 EXOSC9Q06265 439 aaKnown RBP19.77■□□□□ 0.76
CCDC40-202ENST00000374876 LGR6Q9HBX8 967 aa19.77■□□□□ 0.76
CCDC40-202ENST00000374876 DOT1LQ8TEK3 1739 aa19.76■□□□□ 0.75
CCDC40-202ENST00000374876 ZKSCAN2Q63HK3 967 aa19.76■□□□□ 0.75
CCDC40-202ENST00000374876 GAS2L2Q8NHY3 880 aa19.76■□□□□ 0.75
CCDC40-202ENST00000374876 DCAF5Q96JK2 942 aa19.76■□□□□ 0.75
CCDC40-202ENST00000374876 TNNQ9UQP3 1299 aa19.76■□□□□ 0.75
CCDC40-202ENST00000374876 HSP90AB1P08238 724 aaKnown RBP19.75■□□□□ 0.75
CCDC40-202ENST00000374876 C8orf34Q49A92 452 aa19.75■□□□□ 0.75
CCDC40-202ENST00000374876 DDRGK1Q96HY6 314 aa19.75■□□□□ 0.75
CCDC40-202ENST00000374876 SMC4Q9NTJ3 1288 aa19.75■□□□□ 0.75
CCDC40-202ENST00000374876 FTSJ3Q8IY81 847 aaKnown RBP19.75■□□□□ 0.75
CCDC40-202ENST00000374876 TNS1Q9HBL0 1735 aaKnown RBP19.74■□□□□ 0.75
CCDC40-202ENST00000374876 KDM6AO15550 1401 aaPredicted RBP19.74■□□□□ 0.75
CCDC40-202ENST00000374876 BAG6P46379 1132 aa19.74■□□□□ 0.75
CCDC40-202ENST00000374876 TOGARAM1Q9Y4F4 1720 aa19.74■□□□□ 0.75
CCDC40-202ENST00000374876 GNAT3A8MTJ3 354 aa19.73■□□□□ 0.75
CCDC40-202ENST00000374876 NHSQ6T4R5 1651 aa19.73■□□□□ 0.75
CCDC40-202ENST00000374876 EZH2Q15910 746 aaKnown RBP19.73■□□□□ 0.75
CCDC40-202ENST00000374876 PIGBQ92521 554 aa19.73■□□□□ 0.75
CCDC40-202ENST00000374876 RNMTO43148 476 aaKnown RBP19.72■□□□□ 0.75
CCDC40-202ENST00000374876 NBR1Q14596 966 aa19.72■□□□□ 0.75
CCDC40-202ENST00000374876 MVPQ14764 893 aaKnown RBP19.72■□□□□ 0.75
CCDC40-202ENST00000374876 DZIP1LQ8IYY4 767 aaKnown RBP19.72■□□□□ 0.75
CCDC40-202ENST00000374876 NFATC2IPQ8NCF5 419 aa19.71■□□□□ 0.75
CCDC40-202ENST00000374876 TMOD3Q9NYL9 352 aa19.71■□□□□ 0.75
CCDC40-202ENST00000374876 ERVV-2B6SEH9 535 aa19.71■□□□□ 0.75
CCDC40-202ENST00000374876 CABP4P57796 275 aa19.71■□□□□ 0.75
CCDC40-202ENST00000374876 IL17REQ8NFR9 667 aa19.71■□□□□ 0.75
CCDC40-202ENST00000374876 CAMKK2Q96RR4 588 aa19.71■□□□□ 0.75
CCDC40-202ENST00000374876 PCDHB15Q9Y5E8 787 aa19.71■□□□□ 0.75
CCDC40-202ENST00000374876 ITGB4P16144 1822 aa19.71■□□□□ 0.75
CCDC40-202ENST00000374876 MAP3K5Q99683 1374 aa19.7■□□□□ 0.74
CCDC40-202ENST00000374876 DCTN1Q14203 1278 aa19.7■□□□□ 0.74
CCDC40-202ENST00000374876 SSH1Q8WYL5 1049 aa19.7■□□□□ 0.74
CCDC40-202ENST00000374876 BTAF1O14981 1849 aa19.7■□□□□ 0.74
CCDC40-202ENST00000374876 NFE2L2Q16236 605 aa19.69■□□□□ 0.74
CCDC40-202ENST00000374876 MCM10Q7L590 875 aa19.69■□□□□ 0.74
CCDC40-202ENST00000374876 PLSCR1O15162 318 aa19.69■□□□□ 0.74
CCDC40-202ENST00000374876 RWDD1Q9H446 243 aaPredicted RBP19.69■□□□□ 0.74
CCDC40-202ENST00000374876 PROM2Q8N271 834 aa19.68■□□□□ 0.74
CCDC40-202ENST00000374876 ASAP1Q9ULH1 1129 aa19.68■□□□□ 0.74
CCDC40-202ENST00000374876 TRIM27P14373 513 aa19.67■□□□□ 0.74
CCDC40-202ENST00000374876 RTF1Q92541 710 aaKnown RBP19.67■□□□□ 0.74
CCDC40-202ENST00000374876 SLC52A2Q9HAB3 445 aa19.67■□□□□ 0.74
CCDC40-202ENST00000374876 SCN11AQ9UI33 1791 aa19.67■□□□□ 0.74
CCDC40-202ENST00000374876 KCNQ4P56696 695 aa19.66■□□□□ 0.74
CCDC40-202ENST00000374876 CALD1Q05682 793 aaKnown RBP19.66■□□□□ 0.74
CCDC40-202ENST00000374876 ATF7IPQ6VMQ6 1270 aa19.66■□□□□ 0.74
CCDC40-202ENST00000374876 VIRMAQ69YN4 1812 aaKnown RBP19.65■□□□□ 0.74
CCDC40-202ENST00000374876 NOB1Q9ULX3 412 aaKnown RBP19.65■□□□□ 0.74
CCDC40-202ENST00000374876 DLG5Q8TDM6 1919 aa19.65■□□□□ 0.74
CCDC40-202ENST00000374876 KIF16BQ96L93 1317 aa19.65■□□□□ 0.74
CCDC40-202ENST00000374876 TXNRD1Q16881 649 aa19.64■□□□□ 0.74
CCDC40-202ENST00000374876 THUMPD2Q9BTF0 503 aaKnown RBP19.64■□□□□ 0.74
CCDC40-202ENST00000374876 ATG3Q9NT62 314 aa19.64■□□□□ 0.74
CCDC40-202ENST00000374876 DDX19BQ9UMR2 479 aa19.64■□□□□ 0.74
CCDC40-202ENST00000374876 LAS1LQ9Y4W2 734 aaKnown RBP19.64■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms