RNA–Protein interactions for RNA: ENST00000374837.7

MAP1LC3A-202, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

TSL 3 BASIC

Gene MAP1LC3A, Length 961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-202ENST00000374837 SLC15A2Q16348 729 aa27.84■■■□□ 2.05
MAP1LC3A-202ENST00000374837 ADAMTS8Q9UP79 889 aa27.83■■■□□ 2.05
MAP1LC3A-202ENST00000374837 LOC102724428A0A0B4J2F2 783 aa27.82■■■□□ 2.04
MAP1LC3A-202ENST00000374837 SIK1P57059 783 aa27.82■■■□□ 2.04
MAP1LC3A-202ENST00000374837 ZNF827Q17R98 1081 aa27.81■■■□□ 2.04
MAP1LC3A-202ENST00000374837 MAPK8IP3Q9UPT6 1336 aa27.81■■■□□ 2.04
MAP1LC3A-202ENST00000374837 NFE2L2Q16236 605 aa27.8■■■□□ 2.04
MAP1LC3A-202ENST00000374837 AKT1S1Q96B36 256 aa27.8■■■□□ 2.04
MAP1LC3A-202ENST00000374837 LY75O60449 1722 aa27.79■■■□□ 2.04
MAP1LC3A-202ENST00000374837 HTATSF1O43719 755 aaKnown RBP27.79■■■□□ 2.04
MAP1LC3A-202ENST00000374837 RTF1Q92541 710 aaKnown RBP27.79■■■□□ 2.04
MAP1LC3A-202ENST00000374837 TEFQ10587 303 aa27.78■■■□□ 2.04
MAP1LC3A-202ENST00000374837 MCM10Q7L590 875 aa27.78■■■□□ 2.04
MAP1LC3A-202ENST00000374837 CCDC146Q8IYE0 955 aa27.78■■■□□ 2.04
MAP1LC3A-202ENST00000374837 RBM42Q9BTD8 480 aaKnown RBP27.78■■■□□ 2.04
MAP1LC3A-202ENST00000374837 MRC1P22897 1456 aa27.77■■■□□ 2.04
MAP1LC3A-202ENST00000374837 CEMIPQ8WUJ3 1361 aa27.77■■■□□ 2.04
MAP1LC3A-202ENST00000374837 ATP6V1AP38606 617 aa27.77■■■□□ 2.04
MAP1LC3A-202ENST00000374837 SLC39A6Q13433 755 aa27.77■■■□□ 2.04
MAP1LC3A-202ENST00000374837 DCTN1Q14203 1278 aa27.77■■■□□ 2.04
MAP1LC3A-202ENST00000374837 SLC4A9Q96Q91 983 aa27.77■■■□□ 2.04
MAP1LC3A-202ENST00000374837 SCN11AQ9UI33 1791 aa27.77■■■□□ 2.04
MAP1LC3A-202ENST00000374837 ADAMTS7Q9UKP4 1686 aa27.77■■■□□ 2.04
MAP1LC3A-202ENST00000374837 ITPK1Q13572 414 aa27.76■■■□□ 2.03
MAP1LC3A-202ENST00000374837 PAPPAQ13219 1627 aa27.75■■■□□ 2.03
MAP1LC3A-202ENST00000374837 PTCD1O75127 700 aaKnown RBP27.75■■■□□ 2.03
MAP1LC3A-202ENST00000374837 RUNDC1Q96C34 613 aa27.75■■■□□ 2.03
MAP1LC3A-202ENST00000374837 PPP1R1BQ9UD71 204 aaPredicted RBP27.75■■■□□ 2.03
MAP1LC3A-202ENST00000374837 HMGB2P26583 209 aaKnown RBP27.74■■■□□ 2.03
MAP1LC3A-202ENST00000374837 MRS2Q9HD23 443 aa27.74■■■□□ 2.03
MAP1LC3A-202ENST00000374837 LINC00116Q8NCU8 138 aa27.73■■■□□ 2.03
MAP1LC3A-202ENST00000374837 PDGFDQ9GZP0 370 aaPredicted RBP27.73■■■□□ 2.03
MAP1LC3A-202ENST00000374837 DCAF8L1A6NGE4 600 aa27.72■■■□□ 2.03
MAP1LC3A-202ENST00000374837 TMPOP42166 694 aaKnown RBP27.72■■■□□ 2.03
MAP1LC3A-202ENST00000374837 TFCP2L1Q9NZI6 479 aa27.72■■■□□ 2.03
MAP1LC3A-202ENST00000374837 RIPK4P57078 832 aa27.71■■■□□ 2.03
MAP1LC3A-202ENST00000374837 SPON1Q9HCB6 807 aa27.71■■■□□ 2.03
MAP1LC3A-202ENST00000374837 PNISRQ8TF01 805 aaKnown RBP27.7■■■□□ 2.02
MAP1LC3A-202ENST00000374837 RRP7AQ9Y3A4 280 aaKnown RBP27.69■■■□□ 2.02
MAP1LC3A-202ENST00000374837 BTBD11A6QL63 1104 aa27.68■■■□□ 2.02
MAP1LC3A-202ENST00000374837 ZNF790Q6PG37 636 aa27.67■■■□□ 2.02
MAP1LC3A-202ENST00000374837 TTC5Q8N0Z6 440 aa27.67■■■□□ 2.02
MAP1LC3A-202ENST00000374837 THUMPD2Q9BTF0 503 aaKnown RBP27.67■■■□□ 2.02
MAP1LC3A-202ENST00000374837 PNPLA7Q6ZV29 1317 aa27.67■■■□□ 2.02
MAP1LC3A-202ENST00000374837 KCNQ3O43525 872 aa27.66■■■□□ 2.02
MAP1LC3A-202ENST00000374837 NEUROD2Q15784 382 aa27.66■■■□□ 2.02
MAP1LC3A-202ENST00000374837 AK7Q96M32 723 aa27.66■■■□□ 2.02
MAP1LC3A-202ENST00000374837 TAF7Q15545 349 aaPredicted RBP27.65■■■□□ 2.02
MAP1LC3A-202ENST00000374837 DNAJC10Q8IXB1 793 aa27.63■■■□□ 2.01
MAP1LC3A-202ENST00000374837 ZNF496Q96IT1 587 aaPredicted RBP27.63■■■□□ 2.01
MAP1LC3A-202ENST00000374837 APAF1O14727 1248 aa27.62■■■□□ 2.01
MAP1LC3A-202ENST00000374837 ZBTB7AO95365 584 aa27.62■■■□□ 2.01
MAP1LC3A-202ENST00000374837 LMOD3Q0VAK6 560 aa27.62■■■□□ 2.01
MAP1LC3A-202ENST00000374837 RC3H1Q5TC82 1133 aaKnown RBP27.62■■■□□ 2.01
MAP1LC3A-202ENST00000374837 AMIGO3Q86WK7 504 aa27.62■■■□□ 2.01
MAP1LC3A-202ENST00000374837 COL23A1Q86Y22 540 aaPredicted RBP27.62■■■□□ 2.01
MAP1LC3A-202ENST00000374837 MIS18AQ9NYP9 233 aa27.62■■■□□ 2.01
MAP1LC3A-202ENST00000374837 C5P01031 1676 aa27.62■■■□□ 2.01
MAP1LC3A-202ENST00000374837 KCPQ6ZWJ8 1503 aa27.62■■■□□ 2.01
MAP1LC3A-202ENST00000374837 SMIM5Q71RC9 77 aa27.61■■■□□ 2.01
MAP1LC3A-202ENST00000374837 VSIG10Q8N0Z9 540 aa27.61■■■□□ 2.01
MAP1LC3A-202ENST00000374837 GNPATO15228 680 aa27.6■■■□□ 2.01
MAP1LC3A-202ENST00000374837 TRIM35Q9UPQ4 493 aa27.6■■■□□ 2.01
MAP1LC3A-202ENST00000374837 C4BP0C0L5 1744 aa27.6■■■□□ 2.01
MAP1LC3A-202ENST00000374837 VIRMAQ69YN4 1812 aaKnown RBP27.6■■■□□ 2.01
MAP1LC3A-202ENST00000374837 FLAD1Q8NFF5 587 aa27.59■■■□□ 2.01
MAP1LC3A-202ENST00000374837 FMNL2Q96PY5 1086 aa27.59■■■□□ 2.01
MAP1LC3A-202ENST00000374837 ATF5Q9Y2D1 282 aaPredicted RBP27.59■■■□□ 2.01
MAP1LC3A-202ENST00000374837 CNTNAP4Q9C0A0 1308 aa27.59■■■□□ 2.01
MAP1LC3A-202ENST00000374837 MSH5O43196 834 aa27.58■■■□□ 2.01
MAP1LC3A-202ENST00000374837 CRKLP46109 303 aaKnown RBP27.58■■■□□ 2.01
MAP1LC3A-202ENST00000374837 TAF1LQ8IZX4 1826 aa27.57■■■□□ 2
MAP1LC3A-202ENST00000374837 ZNF831Q5JPB2 1677 aa27.57■■■□□ 2
MAP1LC3A-202ENST00000374837 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.57■■■□□ 2
MAP1LC3A-202ENST00000374837 PHF14O94880 888 aa27.57■■■□□ 2
MAP1LC3A-202ENST00000374837 SLC16A10Q8TF71 515 aa27.57■■■□□ 2
MAP1LC3A-202ENST00000374837 MTFR1LQ9H019 292 aa27.57■■■□□ 2
MAP1LC3A-202ENST00000374837 SIPA1L3O60292 1781 aaPredicted RBP27.57■■■□□ 2
MAP1LC3A-202ENST00000374837 CASZ1Q86V15 1759 aa27.57■■■□□ 2
MAP1LC3A-202ENST00000374837 HEG1Q9ULI3 1381 aa27.57■■■□□ 2
MAP1LC3A-202ENST00000374837 CYP19A1P11511 503 aaPredicted RBP27.56■■■□□ 2
MAP1LC3A-202ENST00000374837 SSFA2P28290 1259 aa27.56■■■□□ 2
MAP1LC3A-202ENST00000374837 DLG5Q8TDM6 1919 aa27.55■■■□□ 2
MAP1LC3A-202ENST00000374837 RPS6KA4O75676 772 aa27.55■■■□□ 2
MAP1LC3A-202ENST00000374837 INTS5Q6P9B9 1019 aaKnown RBP27.55■■■□□ 2
MAP1LC3A-202ENST00000374837 RTCBQ9Y3I0 505 aaKnown RBP27.55■■■□□ 2
MAP1LC3A-202ENST00000374837 DIEXFQ68CQ4 756 aaKnown RBP27.54■■■□□ 2
MAP1LC3A-202ENST00000374837 FAM9BQ8IZU0 186 aa27.53■■■□□ 2
MAP1LC3A-202ENST00000374837 TEX13AQ9BXU3 409 aaPredicted RBP27.53■■■□□ 2
MAP1LC3A-202ENST00000374837 CCDC87Q9NVE4 849 aa27.53■■■□□ 2
MAP1LC3A-202ENST00000374837 TRAPPC3LQ5T215 181 aa27.52■■■□□ 2
MAP1LC3A-202ENST00000374837 STARD3NLO95772 234 aa27.51■■□□□ 1.99
MAP1LC3A-202ENST00000374837 PTGER2P43116 358 aa27.51■■□□□ 1.99
MAP1LC3A-202ENST00000374837 TJP1Q07157 1748 aa27.5■■□□□ 1.99
MAP1LC3A-202ENST00000374837 SENP3-EIF4A1A0A087X0R7 540 aa27.5■■□□□ 1.99
MAP1LC3A-202ENST00000374837 UBR2Q8IWV8 1755 aa27.5■■□□□ 1.99
MAP1LC3A-202ENST00000374837 QSER1Q2KHR3 1735 aa27.5■■□□□ 1.99
MAP1LC3A-202ENST00000374837 TUBGCP6Q96RT7 1819 aa27.49■■□□□ 1.99
MAP1LC3A-202ENST00000374837 PRAMEF22A3QJZ6 481 aa27.49■■□□□ 1.99
MAP1LC3A-202ENST00000374837 SNRPA1P09661 255 aaKnown RBP27.49■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms