RNA–Protein interactions for RNA: ENST00000374338.4

LDLRAP1-201, Transcript of low density lipoprotein receptor adaptor protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDLRAP1, Length 2,940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1-201ENST00000374338 PDLIM2Q96JY6 352 aa21.17■□□□□ 0.98
LDLRAP1-201ENST00000374338 ZKSCAN5Q9Y2L8 839 aa21.17■□□□□ 0.98
LDLRAP1-201ENST00000374338 LMOD2Q6P5Q4 547 aa21.16■□□□□ 0.98
LDLRAP1-201ENST00000374338 TMEM51Q9NW97 253 aa21.16■□□□□ 0.98
LDLRAP1-201ENST00000374338 GCC1Q96CN9 775 aa21.15■□□□□ 0.98
LDLRAP1-201ENST00000374338 PKP1Q13835 747 aa21.15■□□□□ 0.98
LDLRAP1-201ENST00000374338 MCTP1Q6DN14 999 aa21.15■□□□□ 0.98
LDLRAP1-201ENST00000374338 PLEKHM2Q8IWE5 1019 aa21.15■□□□□ 0.98
LDLRAP1-201ENST00000374338 MPNDQ8N594 471 aa21.15■□□□□ 0.98
LDLRAP1-201ENST00000374338 SNX21Q969T3 373 aa21.15■□□□□ 0.98
LDLRAP1-201ENST00000374338 EXOC6BQ9Y2D4 811 aa21.15■□□□□ 0.98
LDLRAP1-201ENST00000374338 PTCH1Q13635 1447 aa21.15■□□□□ 0.98
LDLRAP1-201ENST00000374338 KLHL40Q2TBA0 621 aa21.14■□□□□ 0.97
LDLRAP1-201ENST00000374338 BMP2KLQ5H9B9 411 aa21.14■□□□□ 0.97
LDLRAP1-201ENST00000374338 RBM25P49756 843 aaKnown RBP21.14■□□□□ 0.97
LDLRAP1-201ENST00000374338 RBM27Q9P2N5 1060 aaKnown RBP21.14■□□□□ 0.97
LDLRAP1-201ENST00000374338 BRPF1P55201 1214 aaPredicted RBP21.13■□□□□ 0.97
LDLRAP1-201ENST00000374338 CBX1P83916 185 aa21.13■□□□□ 0.97
LDLRAP1-201ENST00000374338 CEP85Q6P2H3 762 aa21.13■□□□□ 0.97
LDLRAP1-201ENST00000374338 RBSNQ9H1K0 784 aa21.12■□□□□ 0.97
LDLRAP1-201ENST00000374338 LETM1O95202 739 aaPredicted RBP21.12■□□□□ 0.97
LDLRAP1-201ENST00000374338 BAG4O95429 457 aaKnown RBP21.12■□□□□ 0.97
LDLRAP1-201ENST00000374338 UBR1Q8IWV7 1749 aa21.12■□□□□ 0.97
LDLRAP1-201ENST00000374338 PEAK1Q9H792 1746 aa21.12■□□□□ 0.97
LDLRAP1-201ENST00000374338 REREQ9P2R6 1566 aa21.12■□□□□ 0.97
LDLRAP1-201ENST00000374338 OVOS2A0A0J9YW53 1432 aa21.12■□□□□ 0.97
LDLRAP1-201ENST00000374338 TECPR2O15040 1411 aa21.12■□□□□ 0.97
LDLRAP1-201ENST00000374338 OVOS2Q6IE36 1432 aa21.12■□□□□ 0.97
LDLRAP1-201ENST00000374338 ANXA1P04083 346 aa21.11■□□□□ 0.97
LDLRAP1-201ENST00000374338 ZNF445P59923 1031 aa21.11■□□□□ 0.97
LDLRAP1-201ENST00000374338 EIF2S2P20042 333 aaKnown RBP21.11■□□□□ 0.97
LDLRAP1-201ENST00000374338 TSC1Q92574 1164 aa21.11■□□□□ 0.97
LDLRAP1-201ENST00000374338 SIRT1Q96EB6 747 aa21.11■□□□□ 0.97
LDLRAP1-201ENST00000374338 RGPD8O14715 1765 aaPredicted RBP21.11■□□□□ 0.97
LDLRAP1-201ENST00000374338 C3P01024 1663 aa21.11■□□□□ 0.97
LDLRAP1-201ENST00000374338 MCM5P33992 734 aa21.11■□□□□ 0.97
LDLRAP1-201ENST00000374338 FKBP5Q13451 457 aaPredicted RBP21.11■□□□□ 0.97
LDLRAP1-201ENST00000374338 PLEKHG1Q9ULL1 1385 aa21.1■□□□□ 0.97
LDLRAP1-201ENST00000374338 ITSN1Q15811 1721 aa21.1■□□□□ 0.97
LDLRAP1-201ENST00000374338 MON2Q7Z3U7 1717 aa21.1■□□□□ 0.97
LDLRAP1-201ENST00000374338 FOXD4L5Q5VV16 416 aaPredicted RBP21.1■□□□□ 0.97
LDLRAP1-201ENST00000374338 FOXD4L4Q8WXT5 416 aaPredicted RBP21.1■□□□□ 0.97
LDLRAP1-201ENST00000374338 GOLGA6L22H0YM25 854 aa21.09■□□□□ 0.97
LDLRAP1-201ENST00000374338 K7ELQ4 463 aaPredicted RBP21.09■□□□□ 0.97
LDLRAP1-201ENST00000374338 PRIM1P49642 420 aaKnown RBP21.09■□□□□ 0.97
LDLRAP1-201ENST00000374338 IPO4Q8TEX9 1081 aaKnown RBP21.09■□□□□ 0.97
LDLRAP1-201ENST00000374338 DCTPP1Q9H773 170 aa21.09■□□□□ 0.97
LDLRAP1-201ENST00000374338 PIK3R4Q99570 1358 aa21.09■□□□□ 0.97
LDLRAP1-201ENST00000374338 INTS3Q68E01 1043 aaKnown RBP21.08■□□□□ 0.97
LDLRAP1-201ENST00000374338 CEP170BQ9Y4F5 1589 aaPredicted RBP21.08■□□□□ 0.97
LDLRAP1-201ENST00000374338 LRRC59Q96AG4 307 aaKnown RBP21.08■□□□□ 0.97
LDLRAP1-201ENST00000374338 KNDC1Q76NI1 1749 aa21.08■□□□□ 0.96
LDLRAP1-201ENST00000374338 IL17REQ8NFR9 667 aa21.08■□□□□ 0.96
LDLRAP1-201ENST00000374338 RGS12O14924 1447 aa21.07■□□□□ 0.96
LDLRAP1-201ENST00000374338 ZSCAN23Q3MJ62 389 aa21.07■□□□□ 0.96
LDLRAP1-201ENST00000374338 ZNF710Q8N1W2 664 aa21.07■□□□□ 0.96
LDLRAP1-201ENST00000374338 RNF214Q8ND24 703 aa21.07■□□□□ 0.96
LDLRAP1-201ENST00000374338 HOXC9P31274 260 aa21.07■□□□□ 0.96
LDLRAP1-201ENST00000374338 ANKRD44Q8N8A2 993 aa21.07■□□□□ 0.96
LDLRAP1-201ENST00000374338 MYRIPQ8NFW9 859 aa21.07■□□□□ 0.96
LDLRAP1-201ENST00000374338 PHAXQ9H814 394 aaKnown RBP21.07■□□□□ 0.96
LDLRAP1-201ENST00000374338 SDSP20132 328 aa21.06■□□□□ 0.96
LDLRAP1-201ENST00000374338 THEMISQ8N1K5 641 aaPredicted RBP21.06■□□□□ 0.96
LDLRAP1-201ENST00000374338 ESCO1Q5FWF5 840 aa21.06■□□□□ 0.96
LDLRAP1-201ENST00000374338 CRB1P82279 1406 aa21.06■□□□□ 0.96
LDLRAP1-201ENST00000374338 RTL1A6NKG5 1358 aa21.05■□□□□ 0.96
LDLRAP1-201ENST00000374338 ATP2B3Q16720 1220 aa21.05■□□□□ 0.96
LDLRAP1-201ENST00000374338 KCNQ3O43525 872 aa21.05■□□□□ 0.96
LDLRAP1-201ENST00000374338 CLEC17AQ6ZS10 378 aa21.05■□□□□ 0.96
LDLRAP1-201ENST00000374338 NOL8Q76FK4 1167 aaKnown RBP21.05■□□□□ 0.96
LDLRAP1-201ENST00000374338 AKAP12Q02952 1782 aa21.05■□□□□ 0.96
LDLRAP1-201ENST00000374338 PNMA6EA0A0J9YXQ4 647 aa21.05■□□□□ 0.96
LDLRAP1-201ENST00000374338 FAM177BA6PVY3 158 aa21.05■□□□□ 0.96
LDLRAP1-201ENST00000374338 CDC45O75419 566 aa21.05■□□□□ 0.96
LDLRAP1-201ENST00000374338 LGR6Q9HBX8 967 aa21.05■□□□□ 0.96
LDLRAP1-201ENST00000374338 TTC22Q5TAA0 569 aa21.04■□□□□ 0.96
LDLRAP1-201ENST00000374338 TBX22Q9Y458 520 aa21.04■□□□□ 0.96
LDLRAP1-201ENST00000374338 FLT4P35916 1363 aa21.03■□□□□ 0.96
LDLRAP1-201ENST00000374338 PRPF40AO75400 957 aaKnown RBP21.03■□□□□ 0.96
LDLRAP1-201ENST00000374338 MAP4K4O95819 1239 aaPredicted RBP21.03■□□□□ 0.96
LDLRAP1-201ENST00000374338 STK31Q9BXU1 1019 aa21.03■□□□□ 0.96
LDLRAP1-201ENST00000374338 ATP10DQ9P241 1426 aa21.03■□□□□ 0.96
LDLRAP1-201ENST00000374338 FLIIQ13045 1269 aa21.02■□□□□ 0.96
LDLRAP1-201ENST00000374338 IL1RAPL2Q9NP60 686 aa21.02■□□□□ 0.96
LDLRAP1-201ENST00000374338 GNAT3A8MTJ3 354 aa21.02■□□□□ 0.96
LDLRAP1-201ENST00000374338 VGLL3A8MV65 326 aa21.02■□□□□ 0.96
LDLRAP1-201ENST00000374338 CCDC39Q9UFE4 941 aa21.02■□□□□ 0.96
LDLRAP1-201ENST00000374338 NSFL1CQ9UNZ2 370 aaKnown RBP21.02■□□□□ 0.96
LDLRAP1-201ENST00000374338 DTNBO60941 627 aa21.01■□□□□ 0.95
LDLRAP1-201ENST00000374338 TAF7LQ5H9L4 462 aa21.01■□□□□ 0.95
LDLRAP1-201ENST00000374338 ZNF830Q96NB3 372 aaPredicted RBP21.01■□□□□ 0.95
LDLRAP1-201ENST00000374338 SBNO1A3KN83 1393 aa21■□□□□ 0.95
LDLRAP1-201ENST00000374338 USP31Q70CQ4 1352 aa21■□□□□ 0.95
LDLRAP1-201ENST00000374338 TPRNQ4KMQ1 711 aa21■□□□□ 0.95
LDLRAP1-201ENST00000374338 NBPF6Q5VWK0 638 aa21■□□□□ 0.95
LDLRAP1-201ENST00000374338 NBPF4Q96M43 638 aa21■□□□□ 0.95
LDLRAP1-201ENST00000374338 MPRIPQ6WCQ1 1025 aa21■□□□□ 0.95
LDLRAP1-201ENST00000374338 ZGPATQ8N5A5 531 aaKnown RBP21■□□□□ 0.95
LDLRAP1-201ENST00000374338 ORAI2Q96SN7 254 aa21■□□□□ 0.95
LDLRAP1-201ENST00000374338 SYCE3A1L190 88 aa20.99■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms