RNA–Protein interactions for RNA: ENST00000373993.5

A1CF-202, Transcript of APOBEC1 complementation factor, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene A1CF, Length 1,997 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-202ENST00000373993 CRB1P82279 1406 aa17.78■□□□□ 0.44
A1CF-202ENST00000373993 NFAT5O94916 1531 aa17.77■□□□□ 0.44
A1CF-202ENST00000373993 BCAR3O75815 825 aa17.77■□□□□ 0.44
A1CF-202ENST00000373993 ARHGEF25Q86VW2 580 aa17.77■□□□□ 0.44
A1CF-202ENST00000373993 EDC4Q6P2E9 1401 aaKnown RBP17.77■□□□□ 0.43
A1CF-202ENST00000373993 CSB-PGBD3P0DP91 1061 aa17.77■□□□□ 0.43
A1CF-202ENST00000373993 NASPP49321 788 aaPredicted RBP17.77■□□□□ 0.43
A1CF-202ENST00000373993 ZNF445P59923 1031 aa17.77■□□□□ 0.43
A1CF-202ENST00000373993 BARGINQ6ZT62 677 aa17.77■□□□□ 0.43
A1CF-202ENST00000373993 LTN1O94822 1766 aa17.77■□□□□ 0.43
A1CF-202ENST00000373993 RGPD1P0DJD0 1748 aa17.76■□□□□ 0.43
A1CF-202ENST00000373993 KLHL40Q2TBA0 621 aa17.76■□□□□ 0.43
A1CF-202ENST00000373993 GAS2L3Q86XJ1 694 aa17.75■□□□□ 0.43
A1CF-202ENST00000373993 PDLIM2Q96JY6 352 aa17.75■□□□□ 0.43
A1CF-202ENST00000373993 CT47B1P0C2W7 299 aaPredicted RBP17.74■□□□□ 0.43
A1CF-202ENST00000373993 BAG6P46379 1132 aa17.74■□□□□ 0.43
A1CF-202ENST00000373993 TNPO1Q92973 898 aaKnown RBP17.74■□□□□ 0.43
A1CF-202ENST00000373993 TRIM37O94972 964 aa17.73■□□□□ 0.43
A1CF-202ENST00000373993 PUS7Q96PZ0 661 aaKnown RBP17.73■□□□□ 0.43
A1CF-202ENST00000373993 THRAP3Q9Y2W1 955 aaKnown RBP17.73■□□□□ 0.43
A1CF-202ENST00000373993 USP54Q70EL1 1684 aa17.73■□□□□ 0.43
A1CF-202ENST00000373993 WDR17Q8IZU2 1322 aa17.73■□□□□ 0.43
A1CF-202ENST00000373993 KIF16BQ96L93 1317 aa17.73■□□□□ 0.43
A1CF-202ENST00000373993 FGD1P98174 961 aa17.73■□□□□ 0.43
A1CF-202ENST00000373993 GTPBP4Q9BZE4 634 aaKnown RBP17.73■□□□□ 0.43
A1CF-202ENST00000373993 TNS1Q9HBL0 1735 aaKnown RBP17.73■□□□□ 0.43
A1CF-202ENST00000373993 PARP4Q9UKK3 1724 aaKnown RBP17.73■□□□□ 0.43
A1CF-202ENST00000373993 USP31Q70CQ4 1352 aa17.73■□□□□ 0.43
A1CF-202ENST00000373993 CANXP27824 592 aaKnown RBP17.72■□□□□ 0.43
A1CF-202ENST00000373993 EN1Q05925 392 aaPredicted RBP17.72■□□□□ 0.43
A1CF-202ENST00000373993 HDAC1Q13547 482 aaPredicted RBP17.72■□□□□ 0.43
A1CF-202ENST00000373993 WNK3Q9BYP7 1800 aa17.72■□□□□ 0.43
A1CF-202ENST00000373993 KIF20AO95235 890 aa17.71■□□□□ 0.43
A1CF-202ENST00000373993 DMTNQ08495 405 aa17.71■□□□□ 0.43
A1CF-202ENST00000373993 FAM196AQ6ZSG2 479 aa17.71■□□□□ 0.43
A1CF-202ENST00000373993 COG6Q9Y2V7 657 aa17.71■□□□□ 0.43
A1CF-202ENST00000373993 LRRC37A3O60309 1634 aa17.71■□□□□ 0.43
A1CF-202ENST00000373993 TNNT2P45379 298 aaPredicted RBP17.71■□□□□ 0.43
A1CF-202ENST00000373993 WDR63Q8IWG1 891 aa17.71■□□□□ 0.43
A1CF-202ENST00000373993 SASS6Q6UVJ0 657 aa17.7■□□□□ 0.42
A1CF-202ENST00000373993 CCDC94Q9BW85 323 aaPredicted RBP17.7■□□□□ 0.42
A1CF-202ENST00000373993 OVOS2A0A0J9YW53 1432 aa17.69■□□□□ 0.42
A1CF-202ENST00000373993 OVOS2Q6IE36 1432 aa17.69■□□□□ 0.42
A1CF-202ENST00000373993 ANKRD36BQ8N2N9 1353 aa17.69■□□□□ 0.42
A1CF-202ENST00000373993 APAF1O14727 1248 aa17.69■□□□□ 0.42
A1CF-202ENST00000373993 RARSP54136 660 aaKnown RBP17.69■□□□□ 0.42
A1CF-202ENST00000373993 CCDC27Q2M243 656 aa17.69■□□□□ 0.42
A1CF-202ENST00000373993 ARXQ96QS3 562 aa17.69■□□□□ 0.42
A1CF-202ENST00000373993 PCDHB15Q9Y5E8 787 aa17.69■□□□□ 0.42
A1CF-202ENST00000373993 DDB1Q16531 1140 aa17.68■□□□□ 0.42
A1CF-202ENST00000373993 HSP90AB1P08238 724 aaKnown RBP17.68■□□□□ 0.42
A1CF-202ENST00000373993 FBLN1P23142 703 aa17.68■□□□□ 0.42
A1CF-202ENST00000373993 TAF3Q5VWG9 929 aa17.68■□□□□ 0.42
A1CF-202ENST00000373993 COG3Q96JB2 828 aa17.68■□□□□ 0.42
A1CF-202ENST00000373993 CFAP44Q96MT7 982 aa17.68■□□□□ 0.42
A1CF-202ENST00000373993 SPINK5Q9NQ38 1064 aaPredicted RBP17.68■□□□□ 0.42
A1CF-202ENST00000373993 ZKSCAN5Q9Y2L8 839 aa17.68■□□□□ 0.42
A1CF-202ENST00000373993 PANK1Q8TE04 598 aa17.67■□□□□ 0.42
A1CF-202ENST00000373993 APBA3O96018 575 aa17.66■□□□□ 0.42
A1CF-202ENST00000373993 EZH2Q15910 746 aaKnown RBP17.66■□□□□ 0.42
A1CF-202ENST00000373993 NLRP2Q9NX02 1062 aa17.66■□□□□ 0.42
A1CF-202ENST00000373993 UQCRHLA0A096LP55 91 aa17.66■□□□□ 0.42
A1CF-202ENST00000373993 PSDA5PKW4 1024 aaPredicted RBP17.66■□□□□ 0.42
A1CF-202ENST00000373993 UQCRHP07919 91 aa17.66■□□□□ 0.42
A1CF-202ENST00000373993 WWC1Q8IX03 1113 aa17.66■□□□□ 0.42
A1CF-202ENST00000373993 LTV1Q96GA3 475 aaPredicted RBP17.66■□□□□ 0.42
A1CF-202ENST00000373993 MYOM1P52179 1685 aa17.66■□□□□ 0.42
A1CF-202ENST00000373993 ABCC6O95255 1503 aa17.65■□□□□ 0.42
A1CF-202ENST00000373993 ERBB3P21860 1342 aa17.65■□□□□ 0.42
A1CF-202ENST00000373993 CARD10Q9BWT7 1032 aa17.65■□□□□ 0.42
A1CF-202ENST00000373993 GGNBP2Q9H3C7 697 aa17.65■□□□□ 0.42
A1CF-202ENST00000373993 FAM13BQ9NYF5 915 aa17.65■□□□□ 0.42
A1CF-202ENST00000373993 CCDC39Q9UFE4 941 aa17.65■□□□□ 0.42
A1CF-202ENST00000373993 ANKRD24Q8TF21 1146 aa17.64■□□□□ 0.41
A1CF-202ENST00000373993 R3HCC1Q9Y3T6 440 aaKnown RBP17.64■□□□□ 0.41
A1CF-202ENST00000373993 OVOS2A0A0G2JMS6 1433 aa17.64■□□□□ 0.41
A1CF-202ENST00000373993 MVPQ14764 893 aaKnown RBP17.64■□□□□ 0.41
A1CF-202ENST00000373993 KIF20BQ96Q89 1820 aa17.63■□□□□ 0.41
A1CF-202ENST00000373993 LETM1O95202 739 aaPredicted RBP17.63■□□□□ 0.41
A1CF-202ENST00000373993 HMGN5P82970 282 aaKnown RBP17.63■□□□□ 0.41
A1CF-202ENST00000373993 KLHL34Q8N239 644 aa17.63■□□□□ 0.41
A1CF-202ENST00000373993 PRIMPOLQ96LW4 560 aa17.63■□□□□ 0.41
A1CF-202ENST00000373993 NUCB2P80303 420 aa17.62■□□□□ 0.41
A1CF-202ENST00000373993 MFAP1P55081 439 aaKnown RBP17.62■□□□□ 0.41
A1CF-202ENST00000373993 PEAK1Q9H792 1746 aa17.62■□□□□ 0.41
A1CF-202ENST00000373993 SBF2Q86WG5 1849 aa17.62■□□□□ 0.41
A1CF-202ENST00000373993 DISP2A7MBM2 1401 aa17.61■□□□□ 0.41
A1CF-202ENST00000373993 MAP3K19Q56UN5 1328 aa17.61■□□□□ 0.41
A1CF-202ENST00000373993 AMPHP49418 695 aa17.61■□□□□ 0.41
A1CF-202ENST00000373993 RRS1Q15050 365 aaKnown RBP17.61■□□□□ 0.41
A1CF-202ENST00000373993 FYB1O15117 783 aa17.6■□□□□ 0.41
A1CF-202ENST00000373993 GTF2F1P35269 517 aaKnown RBP eCLIP17.6■□□□□ 0.41
A1CF-202ENST00000373993 MARCH10Q8NA82 808 aaPredicted RBP17.6■□□□□ 0.41
A1CF-202ENST00000373993 CDCA7Q9BWT1 371 aaPredicted RBP17.6■□□□□ 0.41
A1CF-202ENST00000373993 NSD3Q9BZ95 1437 aa17.6■□□□□ 0.41
A1CF-202ENST00000373993 K7ELQ4 463 aaPredicted RBP17.6■□□□□ 0.41
A1CF-202ENST00000373993 EXOC5O00471 708 aa17.6■□□□□ 0.41
A1CF-202ENST00000373993 SPRYD3Q8NCJ5 442 aa17.59■□□□□ 0.41
A1CF-202ENST00000373993 IP6K1Q92551 441 aa17.59■□□□□ 0.41
A1CF-202ENST00000373993 CAMKK2Q96RR4 588 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms