RNA–Protein interactions for RNA: ENST00000373382.5

VPS26A-202, Transcript of VPS26, retromer complex component A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene VPS26A, Length 3,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-202ENST00000373382 FRMPD1Q5SYB0 1578 aa21.5■■□□□ 1.03
VPS26A-202ENST00000373382 CHMP3Q9Y3E7 222 aa21.5■■□□□ 1.03
VPS26A-202ENST00000373382 STK31Q9BXU1 1019 aa21.5■■□□□ 1.03
VPS26A-202ENST00000373382 CNPY2Q9Y2B0 182 aa21.5■■□□□ 1.03
VPS26A-202ENST00000373382 CHMLP26374 656 aa21.48■■□□□ 1.03
VPS26A-202ENST00000373382 TERF1P54274 439 aa21.48■■□□□ 1.03
VPS26A-202ENST00000373382 DDX54Q8TDD1 881 aaKnown RBP21.48■■□□□ 1.03
VPS26A-202ENST00000373382 MAP7D2Q96T17 732 aa21.48■■□□□ 1.03
VPS26A-202ENST00000373382 DYNC1I1O14576 645 aa21.48■■□□□ 1.03
VPS26A-202ENST00000373382 MCM2P49736 904 aa21.48■■□□□ 1.03
VPS26A-202ENST00000373382 PTPRCP08575 1304 aa21.48■■□□□ 1.03
VPS26A-202ENST00000373382 KNDC1Q76NI1 1749 aa21.47■■□□□ 1.03
VPS26A-202ENST00000373382 ADCY5O95622 1261 aa21.47■■□□□ 1.03
VPS26A-202ENST00000373382 IL25Q9H293 177 aa21.47■■□□□ 1.03
VPS26A-202ENST00000373382 CCDC61Q9Y6R9 512 aa21.47■■□□□ 1.03
VPS26A-202ENST00000373382 CPA1P15085 419 aa21.46■■□□□ 1.03
VPS26A-202ENST00000373382 SIGLEC1Q9BZZ2 1709 aa21.46■■□□□ 1.03
VPS26A-202ENST00000373382 PHF14O94880 888 aa21.46■■□□□ 1.03
VPS26A-202ENST00000373382 MCM5P33992 734 aa21.46■■□□□ 1.03
VPS26A-202ENST00000373382 LRRFIP2Q9Y608 721 aaKnown RBP21.46■■□□□ 1.03
VPS26A-202ENST00000373382 MAP2P11137 1827 aaKnown RBP21.46■■□□□ 1.03
VPS26A-202ENST00000373382 SPC24Q8NBT2 197 aa21.46■■□□□ 1.03
VPS26A-202ENST00000373382 ARHGEF40Q8TER5 1519 aa21.45■■□□□ 1.02
VPS26A-202ENST00000373382 CCT4P50991 539 aaKnown RBP21.45■■□□□ 1.02
VPS26A-202ENST00000373382 SRCIN1Q9C0H9 1055 aa21.45■■□□□ 1.02
VPS26A-202ENST00000373382 HECW2Q9P2P5 1572 aa21.44■■□□□ 1.02
VPS26A-202ENST00000373382 ZHX1Q9UKY1 873 aaPredicted RBP21.44■■□□□ 1.02
VPS26A-202ENST00000373382 MLH3Q9UHC1 1453 aa21.44■■□□□ 1.02
VPS26A-202ENST00000373382 WDR33Q9C0J8 1336 aaKnown RBP21.44■■□□□ 1.02
VPS26A-202ENST00000373382 GIMAP6Q6P9H5 292 aa21.44■■□□□ 1.02
VPS26A-202ENST00000373382 BCL11BQ9C0K0 894 aaPredicted RBP21.44■■□□□ 1.02
VPS26A-202ENST00000373382 KIF24Q5T7B8 1368 aa21.43■■□□□ 1.02
VPS26A-202ENST00000373382 RGS12O14924 1447 aa21.43■■□□□ 1.02
VPS26A-202ENST00000373382 CUL4AQ13619 759 aa21.43■■□□□ 1.02
VPS26A-202ENST00000373382 PIK3C2BO00750 1634 aa21.43■■□□□ 1.02
VPS26A-202ENST00000373382 NOLC1Q14978 699 aaKnown RBP eCLIP21.42■■□□□ 1.02
VPS26A-202ENST00000373382 SURF6O75683 361 aaKnown RBP21.42■■□□□ 1.02
VPS26A-202ENST00000373382 MTHFSDQ2M296 383 aaKnown RBP21.41■■□□□ 1.02
VPS26A-202ENST00000373382 SPG7Q9UQ90 795 aa21.41■■□□□ 1.02
VPS26A-202ENST00000373382 CBX1P83916 185 aa21.41■■□□□ 1.02
VPS26A-202ENST00000373382 FLIIQ13045 1269 aa21.41■■□□□ 1.02
VPS26A-202ENST00000373382 OSBPL3Q9H4L5 887 aa21.41■■□□□ 1.02
VPS26A-202ENST00000373382 YEATS2Q9ULM3 1422 aa21.41■■□□□ 1.02
VPS26A-202ENST00000373382 EDC4Q6P2E9 1401 aaKnown RBP21.4■■□□□ 1.02
VPS26A-202ENST00000373382 CWC27Q6UX04 472 aaKnown RBP21.4■■□□□ 1.02
VPS26A-202ENST00000373382 LTV1Q96GA3 475 aaPredicted RBP21.39■■□□□ 1.02
VPS26A-202ENST00000373382 SMC3Q9UQE7 1217 aa21.39■■□□□ 1.02
VPS26A-202ENST00000373382 VPS37CA5D8V6 355 aaPredicted RBP21.39■■□□□ 1.01
VPS26A-202ENST00000373382 INTS4Q96HW7 963 aaKnown RBP21.39■■□□□ 1.01
VPS26A-202ENST00000373382 GNAI3P08754 354 aa21.38■■□□□ 1.01
VPS26A-202ENST00000373382 CCDC183Q5T5S1 534 aa21.38■■□□□ 1.01
VPS26A-202ENST00000373382 UBTFL1P0CB47 393 aaPredicted RBP21.37■■□□□ 1.01
VPS26A-202ENST00000373382 EIF2S2P20042 333 aaKnown RBP21.37■■□□□ 1.01
VPS26A-202ENST00000373382 OS9Q13438 667 aaPredicted RBP21.37■■□□□ 1.01
VPS26A-202ENST00000373382 CCDC83Q8IWF9 413 aa21.37■■□□□ 1.01
VPS26A-202ENST00000373382 ARHGAP31Q2M1Z3 1444 aa21.37■■□□□ 1.01
VPS26A-202ENST00000373382 AK2P54819 239 aa21.36■■□□□ 1.01
VPS26A-202ENST00000373382 CDK12Q9NYV4 1490 aaPredicted RBP21.36■■□□□ 1.01
VPS26A-202ENST00000373382 SYT1P21579 422 aa21.36■■□□□ 1.01
VPS26A-202ENST00000373382 ALKQ9UM73 1620 aa21.36■■□□□ 1.01
VPS26A-202ENST00000373382 STX6O43752 255 aa21.36■■□□□ 1.01
VPS26A-202ENST00000373382 ATP8B2P98198 1209 aa21.36■■□□□ 1.01
VPS26A-202ENST00000373382 MYO5BQ9ULV0 1848 aa21.35■■□□□ 1.01
VPS26A-202ENST00000373382 ANAPC15P60006 121 aa21.35■■□□□ 1.01
VPS26A-202ENST00000373382 NUTM2GQ5VZR2 741 aa21.35■■□□□ 1.01
VPS26A-202ENST00000373382 RASEFQ8IZ41 740 aa21.35■■□□□ 1.01
VPS26A-202ENST00000373382 MYRIPQ8NFW9 859 aa21.35■■□□□ 1.01
VPS26A-202ENST00000373382 AMPHP49418 695 aa21.35■■□□□ 1.01
VPS26A-202ENST00000373382 PLPPR3Q6T4P5 718 aa21.35■■□□□ 1.01
VPS26A-202ENST00000373382 MTERF4Q7Z6M4 381 aaKnown RBP21.35■■□□□ 1.01
VPS26A-202ENST00000373382 CPS1P31327 1500 aa21.35■■□□□ 1.01
VPS26A-202ENST00000373382 MAP3K19Q56UN5 1328 aa21.35■■□□□ 1.01
VPS26A-202ENST00000373382 ZSCAN22P10073 491 aaPredicted RBP21.34■■□□□ 1.01
VPS26A-202ENST00000373382 CASTP20810 708 aaKnown RBP21.34■■□□□ 1.01
VPS26A-202ENST00000373382 DNM1Q05193 864 aaKnown RBP21.34■■□□□ 1.01
VPS26A-202ENST00000373382 FERMT3Q86UX7 667 aa21.34■■□□□ 1.01
VPS26A-202ENST00000373382 PIBF1Q8WXW3 757 aa21.34■■□□□ 1.01
VPS26A-202ENST00000373382 SPDYE4A6NLX3 237 aa21.34■■□□□ 1.01
VPS26A-202ENST00000373382 CAMK4Q16566 473 aa21.34■■□□□ 1.01
VPS26A-202ENST00000373382 REREQ9P2R6 1566 aa21.34■■□□□ 1.01
VPS26A-202ENST00000373382 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.34■■□□□ 1.01
VPS26A-202ENST00000373382 ATP7BP35670 1465 aa21.34■■□□□ 1.01
VPS26A-202ENST00000373382 ANKRD26Q9UPS8 1709 aa21.33■■□□□ 1.01
VPS26A-202ENST00000373382 CDC42BPGQ6DT37 1551 aa21.33■■□□□ 1.01
VPS26A-202ENST00000373382 KIF20BQ96Q89 1820 aa21.33■■□□□ 1.01
VPS26A-202ENST00000373382 FAM184AQ8NB25 1140 aa21.33■■□□□ 1.01
VPS26A-202ENST00000373382 CPSF1Q10570 1443 aaKnown RBP21.33■■□□□ 1
VPS26A-202ENST00000373382 CCDC30Q5VVM6 783 aa21.33■■□□□ 1
VPS26A-202ENST00000373382 PPP1R42Q7Z4L9 355 aa21.33■■□□□ 1
VPS26A-202ENST00000373382 AATKQ6ZMQ8 1374 aa21.32■■□□□ 1
VPS26A-202ENST00000373382 KIAA0232Q92628 1395 aa21.32■■□□□ 1
VPS26A-202ENST00000373382 ACEP12821 1306 aa21.32■■□□□ 1
VPS26A-202ENST00000373382 PRR36Q9H6K5 1346 aa21.32■■□□□ 1
VPS26A-202ENST00000373382 METP08581 1390 aa21.32■■□□□ 1
VPS26A-202ENST00000373382 SRGAP3O43295 1099 aa21.32■■□□□ 1
VPS26A-202ENST00000373382 SNX14Q9Y5W7 946 aa21.32■■□□□ 1
VPS26A-202ENST00000373382 TTC21BQ7Z4L5 1316 aa21.32■■□□□ 1
VPS26A-202ENST00000373382 KCNJ4P48050 445 aa21.32■■□□□ 1
VPS26A-202ENST00000373382 PPP4R3BQ5MIZ7 849 aa21.32■■□□□ 1
VPS26A-202ENST00000373382 PRDM4Q9UKN5 801 aa21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms