RNA–Protein interactions for RNA: ENST00000373327.4

TRAF3IP1-201, Transcript of TRAF3 interacting protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRAF3IP1, Length 4,279 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-201ENST00000373327 DNAAF4Q8WXU2 420 aa21.34■■□□□ 1.01
TRAF3IP1-201ENST00000373327 TCEANC2Q96MN5 208 aa21.34■■□□□ 1.01
TRAF3IP1-201ENST00000373327 JAKMIP1Q96N16 626 aaKnown RBP21.34■■□□□ 1.01
TRAF3IP1-201ENST00000373327 KIAA2012Q0VF49 1180 aa21.33■■□□□ 1.01
TRAF3IP1-201ENST00000373327 SIRT2Q8IXJ6 389 aa21.33■■□□□ 1.01
TRAF3IP1-201ENST00000373327 FAM184AQ8NB25 1140 aa21.33■■□□□ 1.01
TRAF3IP1-201ENST00000373327 CABLES1Q8TDN4 633 aa21.33■■□□□ 1.01
TRAF3IP1-201ENST00000373327 FAM43AQ8N2R8 423 aa21.33■■□□□ 1
TRAF3IP1-201ENST00000373327 CIZ1Q9ULV3 898 aaPredicted RBP21.33■■□□□ 1
TRAF3IP1-201ENST00000373327 PNMA6EA0A0J9YXQ4 647 aa21.32■■□□□ 1
TRAF3IP1-201ENST00000373327 CHL1O00533 1208 aa21.32■■□□□ 1
TRAF3IP1-201ENST00000373327 GSPT1P15170 499 aaKnown RBP21.32■■□□□ 1
TRAF3IP1-201ENST00000373327 LGR6Q9HBX8 967 aa21.32■■□□□ 1
TRAF3IP1-201ENST00000373327 CEP152O94986 1710 aa21.32■■□□□ 1
TRAF3IP1-201ENST00000373327 CASTP20810 708 aaKnown RBP21.32■■□□□ 1
TRAF3IP1-201ENST00000373327 PRPF40BQ6NWY9 871 aaKnown RBP21.32■■□□□ 1
TRAF3IP1-201ENST00000373327 ABCC3O15438 1527 aa21.32■■□□□ 1
TRAF3IP1-201ENST00000373327 ZFYVE9O95405 1425 aa21.32■■□□□ 1
TRAF3IP1-201ENST00000373327 MAP3K2Q9Y2U5 619 aa21.32■■□□□ 1
TRAF3IP1-201ENST00000373327 MLH3Q9UHC1 1453 aa21.32■■□□□ 1
TRAF3IP1-201ENST00000373327 GNL2Q13823 731 aaKnown RBP21.31■■□□□ 1
TRAF3IP1-201ENST00000373327 SHROOM2Q13796 1616 aa21.31■■□□□ 1
TRAF3IP1-201ENST00000373327 PPP6R1Q9UPN7 881 aa21.31■■□□□ 1
TRAF3IP1-201ENST00000373327 ATP5J2-PTCD1G3V325 749 aa21.31■■□□□ 1
TRAF3IP1-201ENST00000373327 EDC4Q6P2E9 1401 aaKnown RBP21.31■■□□□ 1
TRAF3IP1-201ENST00000373327 CWF19L2Q2TBE0 894 aaKnown RBP21.3■■□□□ 1
TRAF3IP1-201ENST00000373327 CCDC83Q8IWF9 413 aa21.3■■□□□ 1
TRAF3IP1-201ENST00000373327 CPA1P15085 419 aa21.29■■□□□ 1
TRAF3IP1-201ENST00000373327 TATP17735 454 aaPredicted RBP21.29■■□□□ 1
TRAF3IP1-201ENST00000373327 KIF1BPQ96EK5 621 aa21.29■■□□□ 1
TRAF3IP1-201ENST00000373327 PHF23Q9BUL5 403 aaPredicted RBP21.29■■□□□ 1
TRAF3IP1-201ENST00000373327 BICD2Q8TD16 824 aa21.28■■□□□ 1
TRAF3IP1-201ENST00000373327 HOXC9P31274 260 aa21.28■■□□□ 1
TRAF3IP1-201ENST00000373327 MYD88Q99836 296 aa21.28■■□□□ 1
TRAF3IP1-201ENST00000373327 ESPNB1AK53 854 aa21.28■■□□□ 1
TRAF3IP1-201ENST00000373327 KCNQ3O43525 872 aa21.28■■□□□ 1
TRAF3IP1-201ENST00000373327 TMX3Q96JJ7 454 aa21.27■■□□□ 1
TRAF3IP1-201ENST00000373327 APPP05067 770 aa21.27■■□□□ 1
TRAF3IP1-201ENST00000373327 R3HCC1Q9Y3T6 440 aaKnown RBP21.27■■□□□ 1
TRAF3IP1-201ENST00000373327 WASHC4Q2M389 1173 aa21.26■□□□□ 0.99
TRAF3IP1-201ENST00000373327 RHPN1Q8TCX5 695 aa21.26■□□□□ 0.99
TRAF3IP1-201ENST00000373327 ORAI2Q96SN7 254 aa21.26■□□□□ 0.99
TRAF3IP1-201ENST00000373327 PKP1Q13835 747 aa21.26■□□□□ 0.99
TRAF3IP1-201ENST00000373327 CABP4P57796 275 aa21.26■□□□□ 0.99
TRAF3IP1-201ENST00000373327 USP26Q9BXU7 913 aa21.26■□□□□ 0.99
TRAF3IP1-201ENST00000373327 FLT4P35916 1363 aa21.26■□□□□ 0.99
TRAF3IP1-201ENST00000373327 TOM1L2Q6ZVM7 507 aa21.26■□□□□ 0.99
TRAF3IP1-201ENST00000373327 ANKRD24Q8TF21 1146 aa21.26■□□□□ 0.99
TRAF3IP1-201ENST00000373327 DDX17Q92841 729 aaKnown RBP21.26■□□□□ 0.99
TRAF3IP1-201ENST00000373327 CWC22Q9HCG8 908 aaKnown RBP21.26■□□□□ 0.99
TRAF3IP1-201ENST00000373327 PHF14O94880 888 aa21.25■□□□□ 0.99
TRAF3IP1-201ENST00000373327 FAM13BQ9NYF5 915 aa21.25■□□□□ 0.99
TRAF3IP1-201ENST00000373327 PPRC1Q5VV67 1664 aaKnown RBP21.25■□□□□ 0.99
TRAF3IP1-201ENST00000373327 ROBO2Q9HCK4 1378 aa21.25■□□□□ 0.99
TRAF3IP1-201ENST00000373327 ATP6V1DQ9Y5K8 247 aa21.25■□□□□ 0.99
TRAF3IP1-201ENST00000373327 NEO1Q92859 1461 aa21.24■□□□□ 0.99
TRAF3IP1-201ENST00000373327 HECW2Q9P2P5 1572 aa21.24■□□□□ 0.99
TRAF3IP1-201ENST00000373327 RNF20Q5VTR2 975 aa21.24■□□□□ 0.99
TRAF3IP1-201ENST00000373327 STK11IPQ8N1F8 1099 aa21.24■□□□□ 0.99
TRAF3IP1-201ENST00000373327 RBM25P49756 843 aaKnown RBP21.24■□□□□ 0.99
TRAF3IP1-201ENST00000373327 DDX11Q96FC9 970 aa21.24■□□□□ 0.99
TRAF3IP1-201ENST00000373327 SF3A1Q15459 793 aaKnown RBP21.24■□□□□ 0.99
TRAF3IP1-201ENST00000373327 CYP46A1Q9Y6A2 500 aa21.24■□□□□ 0.99
TRAF3IP1-201ENST00000373327 SETD1BQ9UPS6 1966 aaKnown RBP21.23■□□□□ 0.99
TRAF3IP1-201ENST00000373327 NBPF7P0C2Y1 421 aaPredicted RBP21.23■□□□□ 0.99
TRAF3IP1-201ENST00000373327 ESYT1Q9BSJ8 1104 aa21.23■□□□□ 0.99
TRAF3IP1-201ENST00000373327 KLHDC4Q8TBB5 520 aa21.23■□□□□ 0.99
TRAF3IP1-201ENST00000373327 ABCC4O15439 1325 aa21.23■□□□□ 0.99
TRAF3IP1-201ENST00000373327 ATP8B2P98198 1209 aa21.22■□□□□ 0.99
TRAF3IP1-201ENST00000373327 HSP90AA2PQ14568 343 aaPredicted RBP21.22■□□□□ 0.99
TRAF3IP1-201ENST00000373327 DBF4Q9UBU7 674 aaPredicted RBP21.22■□□□□ 0.99
TRAF3IP1-201ENST00000373327 GLI2P10070 1586 aa21.22■□□□□ 0.99
TRAF3IP1-201ENST00000373327 IL17REQ8NFR9 667 aa21.22■□□□□ 0.99
TRAF3IP1-201ENST00000373327 PRDM11Q9NQV5 511 aa21.22■□□□□ 0.99
TRAF3IP1-201ENST00000373327 PDRG1Q9NUG6 133 aa21.22■□□□□ 0.99
TRAF3IP1-201ENST00000373327 KRT28Q7Z3Y7 464 aa21.22■□□□□ 0.99
TRAF3IP1-201ENST00000373327 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.22■□□□□ 0.99
TRAF3IP1-201ENST00000373327 NBPF6Q5VWK0 638 aa21.21■□□□□ 0.99
TRAF3IP1-201ENST00000373327 NECAB1Q8N987 351 aa21.21■□□□□ 0.99
TRAF3IP1-201ENST00000373327 SPC24Q8NBT2 197 aa21.21■□□□□ 0.99
TRAF3IP1-201ENST00000373327 KCNH5Q8NCM2 988 aa21.21■□□□□ 0.99
TRAF3IP1-201ENST00000373327 SNX21Q969T3 373 aa21.21■□□□□ 0.99
TRAF3IP1-201ENST00000373327 NBPF4Q96M43 638 aa21.21■□□□□ 0.99
TRAF3IP1-201ENST00000373327 MCM2P49736 904 aa21.21■□□□□ 0.99
TRAF3IP1-201ENST00000373327 TULP4Q9NRJ4 1543 aa21.21■□□□□ 0.99
TRAF3IP1-201ENST00000373327 RBM10P98175 930 aaKnown RBP21.2■□□□□ 0.98
TRAF3IP1-201ENST00000373327 RAB3GAP1Q15042 981 aa21.2■□□□□ 0.98
TRAF3IP1-201ENST00000373327 UBE3BQ7Z3V4 1068 aa21.2■□□□□ 0.98
TRAF3IP1-201ENST00000373327 TTC21AQ8NDW8 1320 aa21.2■□□□□ 0.98
TRAF3IP1-201ENST00000373327 FKBP4Q02790 459 aaKnown RBP eCLIP21.2■□□□□ 0.98
TRAF3IP1-201ENST00000373327 LARP1BQ659C4 914 aaKnown RBP21.2■□□□□ 0.98
TRAF3IP1-201ENST00000373327 GLRX3O76003 335 aaKnown RBP21.19■□□□□ 0.98
TRAF3IP1-201ENST00000373327 QRICH2Q9H0J4 1663 aa21.19■□□□□ 0.98
TRAF3IP1-201ENST00000373327 TMEM2Q9UHN6 1383 aa21.19■□□□□ 0.98
TRAF3IP1-201ENST00000373327 ZBTB3Q9H5J0 574 aa21.18■□□□□ 0.98
TRAF3IP1-201ENST00000373327 CAMK4Q16566 473 aa21.18■□□□□ 0.98
TRAF3IP1-201ENST00000373327 ANTXR1Q9H6X2 564 aa21.18■□□□□ 0.98
TRAF3IP1-201ENST00000373327 PIK3R4Q99570 1358 aa21.18■□□□□ 0.98
TRAF3IP1-201ENST00000373327 MBD3O95983 291 aa21.18■□□□□ 0.98
TRAF3IP1-201ENST00000373327 CSPP1Q1MSJ5 1256 aa21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms