RNA–Protein interactions for RNA: ENST00000372862.7

PABPC4-204, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 5 BASIC

Gene PABPC4, Length 2,470 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-204ENST00000372862 HSPA2P54652 639 aa25.41■■□□□ 1.66
PABPC4-204ENST00000372862 FKBP5Q13451 457 aaPredicted RBP25.41■■□□□ 1.66
PABPC4-204ENST00000372862 CHMP4AQ9BY43 222 aa25.41■■□□□ 1.66
PABPC4-204ENST00000372862 NECTIN2Q92692 538 aa25.4■■□□□ 1.66
PABPC4-204ENST00000372862 N4BP2Q86UW6 1770 aaPredicted RBP25.39■■□□□ 1.66
PABPC4-204ENST00000372862 ZC3H6P61129 1189 aaKnown RBP25.39■■□□□ 1.66
PABPC4-204ENST00000372862 HDGFL1Q5TGJ6 251 aa25.39■■□□□ 1.66
PABPC4-204ENST00000372862 BECN1Q14457 450 aa25.39■■□□□ 1.65
PABPC4-204ENST00000372862 OVOS2A0A0G2JMS6 1433 aa25.38■■□□□ 1.65
PABPC4-204ENST00000372862 HOXB7P09629 217 aa25.38■■□□□ 1.65
PABPC4-204ENST00000372862 ERBB3P21860 1342 aa25.38■■□□□ 1.65
PABPC4-204ENST00000372862 EIF4A1P60842 406 aaKnown RBP25.37■■□□□ 1.65
PABPC4-204ENST00000372862 HMMRO75330 724 aa25.37■■□□□ 1.65
PABPC4-204ENST00000372862 MPRIPQ6WCQ1 1025 aa25.37■■□□□ 1.65
PABPC4-204ENST00000372862 DDX17Q92841 729 aaKnown RBP25.36■■□□□ 1.65
PABPC4-204ENST00000372862 BTBD11A6QL63 1104 aa25.36■■□□□ 1.65
PABPC4-204ENST00000372862 RNMTO43148 476 aaKnown RBP25.36■■□□□ 1.65
PABPC4-204ENST00000372862 MFAP1P55081 439 aaKnown RBP25.36■■□□□ 1.65
PABPC4-204ENST00000372862 PXDNQ92626 1479 aa25.36■■□□□ 1.65
PABPC4-204ENST00000372862 XIRP1Q702N8 1843 aaKnown RBP25.35■■□□□ 1.65
PABPC4-204ENST00000372862 PXDNLA1KZ92 1463 aa25.35■■□□□ 1.65
PABPC4-204ENST00000372862 TNS3Q68CZ2 1445 aa25.35■■□□□ 1.65
PABPC4-204ENST00000372862 RTL5Q5HYW3 569 aaPredicted RBP25.35■■□□□ 1.65
PABPC4-204ENST00000372862 C22orf23Q9BZE7 217 aa25.34■■□□□ 1.65
PABPC4-204ENST00000372862 GNAI2P04899 355 aa25.34■■□□□ 1.65
PABPC4-204ENST00000372862 GNAI3P08754 354 aa25.34■■□□□ 1.65
PABPC4-204ENST00000372862 LMTK3Q96Q04 1460 aa25.32■■□□□ 1.64
PABPC4-204ENST00000372862 COL18A1P39060 1754 aa25.32■■□□□ 1.64
PABPC4-204ENST00000372862 CRYBG1Q9Y4K1 1723 aa25.31■■□□□ 1.64
PABPC4-204ENST00000372862 EIF2S2P20042 333 aaKnown RBP25.31■■□□□ 1.64
PABPC4-204ENST00000372862 SIPA1L3O60292 1781 aaPredicted RBP25.3■■□□□ 1.64
PABPC4-204ENST00000372862 ABCC6O95255 1503 aa25.3■■□□□ 1.64
PABPC4-204ENST00000372862 RAPGEF4Q8WZA2 1011 aa25.3■■□□□ 1.64
PABPC4-204ENST00000372862 PLEKHM2Q8IWE5 1019 aa25.29■■□□□ 1.64
PABPC4-204ENST00000372862 ADAMTS7Q9UKP4 1686 aa25.29■■□□□ 1.64
PABPC4-204ENST00000372862 STRCQ7RTU9 1775 aa25.29■■□□□ 1.64
PABPC4-204ENST00000372862 KCNQ3O43525 872 aa25.29■■□□□ 1.64
PABPC4-204ENST00000372862 NLRP2Q9NX02 1062 aa25.29■■□□□ 1.64
PABPC4-204ENST00000372862 SPATA31A3Q5VYP0 1347 aa25.29■■□□□ 1.64
PABPC4-204ENST00000372862 PHAXQ9H814 394 aaKnown RBP25.28■■□□□ 1.64
PABPC4-204ENST00000372862 USP35Q9P2H5 1018 aa25.28■■□□□ 1.64
PABPC4-204ENST00000372862 CABLES1Q8TDN4 633 aa25.26■■□□□ 1.63
PABPC4-204ENST00000372862 TATP17735 454 aaPredicted RBP25.26■■□□□ 1.63
PABPC4-204ENST00000372862 CHPF2Q9P2E5 772 aa25.25■■□□□ 1.63
PABPC4-204ENST00000372862 SCN11AQ9UI33 1791 aa25.24■■□□□ 1.63
PABPC4-204ENST00000372862 CSB-PGBD3P0DP91 1061 aa25.24■■□□□ 1.63
PABPC4-204ENST00000372862 SPG7Q9UQ90 795 aa25.24■■□□□ 1.63
PABPC4-204ENST00000372862 EIF5BO60841 1220 aaKnown RBP25.23■■□□□ 1.63
PABPC4-204ENST00000372862 TTC22Q5TAA0 569 aa25.23■■□□□ 1.63
PABPC4-204ENST00000372862 CDC45O75419 566 aa25.23■■□□□ 1.63
PABPC4-204ENST00000372862 C16orf71Q8IYS4 520 aaPredicted RBP25.23■■□□□ 1.63
PABPC4-204ENST00000372862 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.23■■□□□ 1.633e-7■□□□□ 10.5
PABPC4-204ENST00000372862 PLEKHG2Q9H7P9 1386 aa25.23■■□□□ 1.63
PABPC4-204ENST00000372862 APBB1O00213 710 aa25.22■■□□□ 1.63
PABPC4-204ENST00000372862 CPDO75976 1380 aa25.22■■□□□ 1.63
PABPC4-204ENST00000372862 ATP8B2P98198 1209 aa25.22■■□□□ 1.63
PABPC4-204ENST00000372862 TBC1D9Q6ZT07 1266 aa25.22■■□□□ 1.63
PABPC4-204ENST00000372862 BRINP3Q76B58 766 aa25.22■■□□□ 1.63
PABPC4-204ENST00000372862 DBF4Q9UBU7 674 aaPredicted RBP25.22■■□□□ 1.63
PABPC4-204ENST00000372862 GSPT1P15170 499 aaKnown RBP25.22■■□□□ 1.63
PABPC4-204ENST00000372862 RBM25P49756 843 aaKnown RBP25.22■■□□□ 1.63
PABPC4-204ENST00000372862 SRCIN1Q9C0H9 1055 aa25.22■■□□□ 1.63
PABPC4-204ENST00000372862 USP44Q9H0E7 712 aa25.22■■□□□ 1.63
PABPC4-204ENST00000372862 HEG1Q9ULI3 1381 aa25.21■■□□□ 1.63
PABPC4-204ENST00000372862 GIGYF1O75420 1035 aaPredicted RBP25.21■■□□□ 1.63
PABPC4-204ENST00000372862 UBTFL1P0CB47 393 aaPredicted RBP25.21■■□□□ 1.63
PABPC4-204ENST00000372862 BCL11AQ9H165 835 aa25.21■■□□□ 1.63
PABPC4-204ENST00000372862 SMARCA5O60264 1052 aaPredicted RBP25.21■■□□□ 1.63
PABPC4-204ENST00000372862 CHRNA2Q15822 529 aa25.21■■□□□ 1.63
PABPC4-204ENST00000372862 TBC1D2Q9BYX2 928 aa25.21■■□□□ 1.63
PABPC4-204ENST00000372862 LRRFIP2Q9Y608 721 aaKnown RBP25.2■■□□□ 1.62
PABPC4-204ENST00000372862 DNAAF4Q8WXU2 420 aa25.19■■□□□ 1.62
PABPC4-204ENST00000372862 KDM4FA0A1W2PPD8 638 aa25.19■■□□□ 1.62
PABPC4-204ENST00000372862 MEGF6O75095 1541 aa25.18■■□□□ 1.62
PABPC4-204ENST00000372862 PI4KAP2A4QPH2 592 aa25.18■■□□□ 1.62
PABPC4-204ENST00000372862 PHKG2P15735 406 aa25.18■■□□□ 1.62
PABPC4-204ENST00000372862 PI4KAP1Q8N8J0 262 aa25.18■■□□□ 1.62
PABPC4-204ENST00000372862 IFNL2Q8IZJ0 200 aa25.17■■□□□ 1.62
PABPC4-204ENST00000372862 OTUD7AQ8TE49 926 aaPredicted RBP25.17■■□□□ 1.62
PABPC4-204ENST00000372862 PNMA6EA0A0J9YXQ4 647 aa25.16■■□□□ 1.62
PABPC4-204ENST00000372862 EXOC6BQ9Y2D4 811 aa25.16■■□□□ 1.62
PABPC4-204ENST00000372862 PKD1L3Q7Z443 1732 aa25.16■■□□□ 1.62
PABPC4-204ENST00000372862 NFKBIBQ15653 356 aa25.15■■□□□ 1.62
PABPC4-204ENST00000372862 SLC52A2Q9HAB3 445 aa25.15■■□□□ 1.62
PABPC4-204ENST00000372862 SLAIN2Q9P270 581 aa25.15■■□□□ 1.62
PABPC4-204ENST00000372862 KDM6AO15550 1401 aaPredicted RBP25.15■■□□□ 1.62
PABPC4-204ENST00000372862 ANXA1P04083 346 aa25.15■■□□□ 1.62
PABPC4-204ENST00000372862 BEND3Q5T5X7 828 aa25.15■■□□□ 1.62
PABPC4-204ENST00000372862 LRRCC1Q9C099 1032 aa25.15■■□□□ 1.62
PABPC4-204ENST00000372862 OSBPL3Q9H4L5 887 aa25.14■■□□□ 1.61
PABPC4-204ENST00000372862 ZNF335Q9H4Z2 1342 aaPredicted RBP25.14■■□□□ 1.61
PABPC4-204ENST00000372862 ADCY9O60503 1353 aa25.13■■□□□ 1.61
PABPC4-204ENST00000372862 ZNF790Q6PG37 636 aa25.13■■□□□ 1.61
PABPC4-204ENST00000372862 HYPKQ9NX55 129 aa25.13■■□□□ 1.61
PABPC4-204ENST00000372862 SOS2Q07890 1332 aaPredicted RBP25.13■■□□□ 1.61
PABPC4-204ENST00000372862 IBTKQ9P2D0 1353 aaPredicted RBP25.13■■□□□ 1.61
PABPC4-204ENST00000372862 CASC1Q6TDU7 716 aa25.11■■□□□ 1.61
PABPC4-204ENST00000372862 SSH3Q8TE77 659 aa25.11■■□□□ 1.61
PABPC4-204ENST00000372862 HSP90AB1P08238 724 aaKnown RBP25.11■■□□□ 1.61
PABPC4-204ENST00000372862 SDSP20132 328 aa25.11■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms