RNA–Protein interactions for RNA: ENST00000372390.8

TSC22D3-205, Transcript of TSC22 domain family member 3, humanhuman

TSL 1 (best) BASIC

Gene TSC22D3, Length 1,812 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC22D3-205ENST00000372390 MYH16Q9H6N6 1097 aa26.94■■□□□ 1.9
TSC22D3-205ENST00000372390 MBIPQ9NS73 344 aa26.94■■□□□ 1.9
TSC22D3-205ENST00000372390 GNAI1P63096 354 aa26.93■■□□□ 1.9
TSC22D3-205ENST00000372390 DOT1LQ8TEK3 1739 aa26.93■■□□□ 1.9
TSC22D3-205ENST00000372390 FAM196AQ6ZSG2 479 aa26.92■■□□□ 1.9
TSC22D3-205ENST00000372390 CHL1O00533 1208 aa26.91■■□□□ 1.9
TSC22D3-205ENST00000372390 FAM182BQ5T319 152 aa26.91■■□□□ 1.9
TSC22D3-205ENST00000372390 TEFQ10587 303 aa26.9■■□□□ 1.9
TSC22D3-205ENST00000372390 TAF7Q15545 349 aaPredicted RBP26.9■■□□□ 1.9
TSC22D3-205ENST00000372390 MRC1P22897 1456 aa26.89■■□□□ 1.9
TSC22D3-205ENST00000372390 KAT6BQ8WYB5 2073 aa26.89■■□□□ 1.89
TSC22D3-205ENST00000372390 ERVV-2B6SEH9 535 aa26.88■■□□□ 1.89
TSC22D3-205ENST00000372390 EXOSC9Q06265 439 aaKnown RBP26.88■■□□□ 1.89
TSC22D3-205ENST00000372390 SLC52A2Q9HAB3 445 aa26.88■■□□□ 1.89
TSC22D3-205ENST00000372390 TSPYL4Q9UJ04 414 aa26.88■■□□□ 1.89
TSC22D3-205ENST00000372390 EP400Q96L91 3159 aa26.87■■□□□ 1.89
TSC22D3-205ENST00000372390 KDM3BQ7LBC6 1761 aa26.87■■□□□ 1.89
TSC22D3-205ENST00000372390 NFATC2IPQ8NCF5 419 aa26.87■■□□□ 1.89
TSC22D3-205ENST00000372390 NHSQ6T4R5 1651 aa26.86■■□□□ 1.89
TSC22D3-205ENST00000372390 ITGB4P16144 1822 aa26.86■■□□□ 1.89
TSC22D3-205ENST00000372390 CABP4P57796 275 aa26.85■■□□□ 1.89
TSC22D3-205ENST00000372390 KRT24Q2M2I5 525 aa26.85■■□□□ 1.89
TSC22D3-205ENST00000372390 SYTL4Q96C24 671 aaPredicted RBP26.85■■□□□ 1.89
TSC22D3-205ENST00000372390 ACSBG1Q96GR2 724 aa26.85■■□□□ 1.89
TSC22D3-205ENST00000372390 KCNQ3O43525 872 aa26.84■■□□□ 1.89
TSC22D3-205ENST00000372390 TMOD3Q9NYL9 352 aa26.84■■□□□ 1.89
TSC22D3-205ENST00000372390 SBF2Q86WG5 1849 aa26.84■■□□□ 1.89
TSC22D3-205ENST00000372390 BTBD11A6QL63 1104 aa26.83■■□□□ 1.89
TSC22D3-205ENST00000372390 PRIM1P49642 420 aaKnown RBP26.82■■□□□ 1.88
TSC22D3-205ENST00000372390 TSPYL6Q8N831 410 aa26.81■■□□□ 1.88
TSC22D3-205ENST00000372390 C8orf58Q8NAV2 365 aa26.81■■□□□ 1.88
TSC22D3-205ENST00000372390 ELL2O00472 640 aaPredicted RBP26.8■■□□□ 1.88
TSC22D3-205ENST00000372390 SLC39A6Q13433 755 aa26.8■■□□□ 1.88
TSC22D3-205ENST00000372390 BABAM1Q9NWV8 329 aa26.79■■□□□ 1.88
TSC22D3-205ENST00000372390 RCAN3Q9UKA8 241 aa26.78■■□□□ 1.88
TSC22D3-205ENST00000372390 KCNQ2O43526 872 aa26.77■■□□□ 1.88
TSC22D3-205ENST00000372390 BCL11BQ9C0K0 894 aaPredicted RBP26.77■■□□□ 1.88
TSC22D3-205ENST00000372390 TRIM37O94972 964 aa26.76■■□□□ 1.88
TSC22D3-205ENST00000372390 PIGBQ92521 554 aa26.76■■□□□ 1.87
TSC22D3-205ENST00000372390 PAPPAQ13219 1627 aa26.76■■□□□ 1.87
TSC22D3-205ENST00000372390 BTAF1O14981 1849 aa26.75■■□□□ 1.87
TSC22D3-205ENST00000372390 EIF4A1P60842 406 aaKnown RBP26.74■■□□□ 1.87
TSC22D3-205ENST00000372390 TWISTNBQ3B726 338 aaPredicted RBP26.74■■□□□ 1.87
TSC22D3-205ENST00000372390 ZNF790Q6PG37 636 aa26.74■■□□□ 1.87
TSC22D3-205ENST00000372390 SUPT16HQ9Y5B9 1047 aaKnown RBP26.74■■□□□ 1.87
TSC22D3-205ENST00000372390 VAMP4O75379 141 aa26.73■■□□□ 1.87
TSC22D3-205ENST00000372390 UBR2Q8IWV8 1755 aa26.71■■□□□ 1.87
TSC22D3-205ENST00000372390 TNS1Q9HBL0 1735 aaKnown RBP26.71■■□□□ 1.87
TSC22D3-205ENST00000372390 PTF1AQ7RTS3 328 aa26.7■■□□□ 1.87
TSC22D3-205ENST00000372390 TTC5Q8N0Z6 440 aa26.7■■□□□ 1.87
TSC22D3-205ENST00000372390 RARSP54136 660 aaKnown RBP26.69■■□□□ 1.86
TSC22D3-205ENST00000372390 BCL2L13Q9BXK5 485 aa26.69■■□□□ 1.86
TSC22D3-205ENST00000372390 ASAP1Q9ULH1 1129 aa26.69■■□□□ 1.86
TSC22D3-205ENST00000372390 BCAR3O75815 825 aa26.69■■□□□ 1.86
TSC22D3-205ENST00000372390 SMARCC1Q92922 1105 aaPredicted RBP26.69■■□□□ 1.86
TSC22D3-205ENST00000372390 ZNF496Q96IT1 587 aaPredicted RBP26.69■■□□□ 1.86
TSC22D3-205ENST00000372390 KCPQ6ZWJ8 1503 aa26.68■■□□□ 1.86
TSC22D3-205ENST00000372390 TCERG1O14776 1098 aaKnown RBP26.68■■□□□ 1.86
TSC22D3-205ENST00000372390 CT47B1P0C2W7 299 aaPredicted RBP26.68■■□□□ 1.86
TSC22D3-205ENST00000372390 C5P01031 1676 aa26.68■■□□□ 1.86
TSC22D3-205ENST00000372390 HEG1Q9ULI3 1381 aa26.68■■□□□ 1.86
TSC22D3-205ENST00000372390 PRAMEF22A3QJZ6 481 aa26.67■■□□□ 1.86
TSC22D3-205ENST00000372390 SF3B2Q13435 895 aaKnown RBP26.67■■□□□ 1.86
TSC22D3-205ENST00000372390 ILDR2Q71H61 639 aa26.67■■□□□ 1.86
TSC22D3-205ENST00000372390 ATG3Q9NT62 314 aa26.67■■□□□ 1.86
TSC22D3-205ENST00000372390 PALLDQ8WX93 1383 aa26.67■■□□□ 1.86
TSC22D3-205ENST00000372390 SSH1Q8WYL5 1049 aa26.66■■□□□ 1.86
TSC22D3-205ENST00000372390 PTCD1O75127 700 aaKnown RBP26.64■■□□□ 1.85
TSC22D3-205ENST00000372390 GIGYF1O75420 1035 aaPredicted RBP26.64■■□□□ 1.85
TSC22D3-205ENST00000372390 APBA3O96018 575 aa26.64■■□□□ 1.85
TSC22D3-205ENST00000372390 CCDC125Q86Z20 511 aa26.64■■□□□ 1.85
TSC22D3-205ENST00000372390 NECTIN2Q92692 538 aa26.64■■□□□ 1.85
TSC22D3-205ENST00000372390 FMNL2Q96PY5 1086 aa26.62■■□□□ 1.85
TSC22D3-205ENST00000372390 SMC4Q9NTJ3 1288 aa26.62■■□□□ 1.85
TSC22D3-205ENST00000372390 RGPD3A6NKT7 1758 aaPredicted RBP26.62■■□□□ 1.85
TSC22D3-205ENST00000372390 RGPD4Q7Z3J3 1758 aa26.62■■□□□ 1.85
TSC22D3-205ENST00000372390 PLIN1O60240 522 aa26.61■■□□□ 1.85
TSC22D3-205ENST00000372390 RNF123Q5XPI4 1314 aa26.61■■□□□ 1.85
TSC22D3-205ENST00000372390 LY75O60449 1722 aa26.6■■□□□ 1.85
TSC22D3-205ENST00000372390 EIF2S2P20042 333 aaKnown RBP26.6■■□□□ 1.85
TSC22D3-205ENST00000372390 RBM42Q9BTD8 480 aaKnown RBP26.6■■□□□ 1.85
TSC22D3-205ENST00000372390 PLSCR1O15162 318 aa26.59■■□□□ 1.85
TSC22D3-205ENST00000372390 BAG6P46379 1132 aa26.59■■□□□ 1.85
TSC22D3-205ENST00000372390 RRP1P56182 461 aaKnown RBP26.59■■□□□ 1.85
TSC22D3-205ENST00000372390 ALDH1L2Q3SY69 923 aa26.58■■□□□ 1.85
TSC22D3-205ENST00000372390 ZNF428Q96B54 188 aa26.58■■□□□ 1.85
TSC22D3-205ENST00000372390 LOC102724428A0A0B4J2F2 783 aa26.58■■□□□ 1.84
TSC22D3-205ENST00000372390 SIK1P57059 783 aa26.58■■□□□ 1.84
TSC22D3-205ENST00000372390 HDGFL1Q5TGJ6 251 aa26.58■■□□□ 1.84
TSC22D3-205ENST00000372390 MRPL50Q8N5N7 158 aaKnown RBP26.58■■□□□ 1.84
TSC22D3-205ENST00000372390 HOXB7P09629 217 aa26.57■■□□□ 1.84
TSC22D3-205ENST00000372390 SNRPA1P09661 255 aaKnown RBP26.57■■□□□ 1.84
TSC22D3-205ENST00000372390 SLC4A9Q96Q91 983 aa26.57■■□□□ 1.84
TSC22D3-205ENST00000372390 SOS1Q07889 1333 aaPredicted RBP26.57■■□□□ 1.84
TSC22D3-205ENST00000372390 LAMB4A4D0S4 1761 aa26.57■■□□□ 1.84
TSC22D3-205ENST00000372390 USP16Q9Y5T5 823 aa26.56■■□□□ 1.84
TSC22D3-205ENST00000372390 ZNF831Q5JPB2 1677 aa26.56■■□□□ 1.84
TSC22D3-205ENST00000372390 IRX6P78412 446 aaPredicted RBP26.55■■□□□ 1.84
TSC22D3-205ENST00000372390 VSIG10Q8N0Z9 540 aa26.55■■□□□ 1.84
TSC22D3-205ENST00000372390 FRAT1Q92837 279 aaPredicted RBP26.55■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms