RNA–Protein interactions for RNA: ENST00000369996.1

TNFRSF6B-201, Transcript of TNF receptor superfamily member 6b, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF6B, Length 1,124 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF6B-201ENST00000369996 U2AF1L5P0DN76 240 aaPredicted RBP30.16■■■□□ 2.42
TNFRSF6B-201ENST00000369996 U2AF1Q01081 240 aaKnown RBP eCLIP30.16■■■□□ 2.42
TNFRSF6B-201ENST00000369996 NFATC2IPQ8NCF5 419 aa30.16■■■□□ 2.42
TNFRSF6B-201ENST00000369996 LINC00116Q8NCU8 138 aa30.16■■■□□ 2.42
TNFRSF6B-201ENST00000369996 RNMTO43148 476 aaKnown RBP30.14■■■□□ 2.42
TNFRSF6B-201ENST00000369996 C4BP0C0L5 1744 aa30.13■■■□□ 2.41
TNFRSF6B-201ENST00000369996 PTGER2P43116 358 aa30.13■■■□□ 2.41
TNFRSF6B-201ENST00000369996 QSER1Q2KHR3 1735 aa30.13■■■□□ 2.41
TNFRSF6B-201ENST00000369996 ADAMTS7Q9UKP4 1686 aa30.12■■■□□ 2.41
TNFRSF6B-201ENST00000369996 NUDCQ9Y266 331 aa30.12■■■□□ 2.41
TNFRSF6B-201ENST00000369996 MRC1P22897 1456 aa30.12■■■□□ 2.41
TNFRSF6B-201ENST00000369996 COL23A1Q86Y22 540 aaPredicted RBP30.1■■■□□ 2.41
TNFRSF6B-201ENST00000369996 RBM42Q9BTD8 480 aaKnown RBP30.1■■■□□ 2.41
TNFRSF6B-201ENST00000369996 ATP6V1AP38606 617 aa30.09■■■□□ 2.41
TNFRSF6B-201ENST00000369996 SLC52A2Q9HAB3 445 aa30.09■■■□□ 2.41
TNFRSF6B-201ENST00000369996 VIRMAQ69YN4 1812 aaKnown RBP30.08■■■□□ 2.41
TNFRSF6B-201ENST00000369996 MAP3K5Q99683 1374 aa30.08■■■□□ 2.41
TNFRSF6B-201ENST00000369996 SGIP1Q9BQI5 828 aa30.08■■■□□ 2.41
TNFRSF6B-201ENST00000369996 MTFR1LQ9H019 292 aa30.08■■■□□ 2.41
TNFRSF6B-201ENST00000369996 PTCD1O75127 700 aaKnown RBP30.07■■■□□ 2.4
TNFRSF6B-201ENST00000369996 RALBP1Q15311 655 aa30.07■■■□□ 2.4
TNFRSF6B-201ENST00000369996 SLC39A6Q13433 755 aa30.06■■■□□ 2.4
TNFRSF6B-201ENST00000369996 IL17REQ8NFR9 667 aa30.06■■■□□ 2.4
TNFRSF6B-201ENST00000369996 GAS2L2Q8NHY3 880 aa30.05■■■□□ 2.4
TNFRSF6B-201ENST00000369996 PPP1R1BQ9UD71 204 aaPredicted RBP30.05■■■□□ 2.4
TNFRSF6B-201ENST00000369996 MSH5O43196 834 aa30.04■■■□□ 2.4
TNFRSF6B-201ENST00000369996 PHF14O94880 888 aa30.04■■■□□ 2.4
TNFRSF6B-201ENST00000369996 AK7Q96M32 723 aa30.04■■■□□ 2.4
TNFRSF6B-201ENST00000369996 UBR3Q6ZT12 1888 aa30.02■■■□□ 2.4
TNFRSF6B-201ENST00000369996 GNAT3A8MTJ3 354 aa30.02■■■□□ 2.4
TNFRSF6B-201ENST00000369996 FCHSD2O94868 740 aa30.02■■■□□ 2.4
TNFRSF6B-201ENST00000369996 MSL1Q68DK7 614 aa30.02■■■□□ 2.4
TNFRSF6B-201ENST00000369996 MYBBP1AQ9BQG0 1328 aaKnown RBP30■■■□□ 2.39
TNFRSF6B-201ENST00000369996 TJP1Q07157 1748 aa30■■■□□ 2.39
TNFRSF6B-201ENST00000369996 KCPQ6ZWJ8 1503 aa30■■■□□ 2.39
TNFRSF6B-201ENST00000369996 COL5A3P25940 1745 aaPredicted RBP29.99■■■□□ 2.39
TNFRSF6B-201ENST00000369996 GNPATO15228 680 aa29.99■■■□□ 2.39
TNFRSF6B-201ENST00000369996 ZNF831Q5JPB2 1677 aa29.98■■■□□ 2.39
TNFRSF6B-201ENST00000369996 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP29.98■■■□□ 2.39
TNFRSF6B-201ENST00000369996 PRKRIP1Q9H875 184 aaPredicted RBP29.97■■■□□ 2.39
TNFRSF6B-201ENST00000369996 DCTN1Q14203 1278 aa29.96■■■□□ 2.39
TNFRSF6B-201ENST00000369996 MCM10Q7L590 875 aa29.96■■■□□ 2.39
TNFRSF6B-201ENST00000369996 PLEKHF1Q96S99 279 aa29.96■■■□□ 2.39
TNFRSF6B-201ENST00000369996 COL24A1Q17RW2 1714 aa29.96■■■□□ 2.39
TNFRSF6B-201ENST00000369996 CEMIPQ8WUJ3 1361 aa29.95■■■□□ 2.39
TNFRSF6B-201ENST00000369996 ZNF316A6NFI3 1004 aaPredicted RBP29.95■■■□□ 2.39
TNFRSF6B-201ENST00000369996 SLC16A10Q8TF71 515 aa29.95■■■□□ 2.39
TNFRSF6B-201ENST00000369996 SIPA1L3O60292 1781 aaPredicted RBP29.95■■■□□ 2.38
TNFRSF6B-201ENST00000369996 DNAJC10Q8IXB1 793 aa29.94■■■□□ 2.38
TNFRSF6B-201ENST00000369996 ARXQ96QS3 562 aa29.93■■■□□ 2.38
TNFRSF6B-201ENST00000369996 FHDC1Q9C0D6 1143 aaPredicted RBP29.93■■■□□ 2.38
TNFRSF6B-201ENST00000369996 MYH14Q7Z406 1995 aaKnown RBP29.93■■■□□ 2.38
TNFRSF6B-201ENST00000369996 KCNQ3O43525 872 aa29.91■■■□□ 2.38
TNFRSF6B-201ENST00000369996 TEFQ10587 303 aa29.91■■■□□ 2.38
TNFRSF6B-201ENST00000369996 CNTNAP4Q9C0A0 1308 aa29.91■■■□□ 2.38
TNFRSF6B-201ENST00000369996 UBR2Q8IWV8 1755 aa29.9■■■□□ 2.38
TNFRSF6B-201ENST00000369996 CICQ96RK0 1608 aaPredicted RBP29.9■■■□□ 2.38
TNFRSF6B-201ENST00000369996 SSFA2P28290 1259 aa29.9■■■□□ 2.38
TNFRSF6B-201ENST00000369996 CRKLP46109 303 aaKnown RBP29.89■■■□□ 2.38
TNFRSF6B-201ENST00000369996 FLAD1Q8NFF5 587 aa29.88■■■□□ 2.37
TNFRSF6B-201ENST00000369996 RC3H1Q5TC82 1133 aaKnown RBP29.87■■■□□ 2.37
TNFRSF6B-201ENST00000369996 INTS5Q6P9B9 1019 aaKnown RBP29.87■■■□□ 2.37
TNFRSF6B-201ENST00000369996 ZNF496Q96IT1 587 aaPredicted RBP29.87■■■□□ 2.37
TNFRSF6B-201ENST00000369996 THUMPD2Q9BTF0 503 aaKnown RBP29.86■■■□□ 2.37
TNFRSF6B-201ENST00000369996 DLG5Q8TDM6 1919 aa29.85■■■□□ 2.37
TNFRSF6B-201ENST00000369996 POLD1P28340 1107 aa29.85■■■□□ 2.37
TNFRSF6B-201ENST00000369996 CCDC146Q8IYE0 955 aa29.85■■■□□ 2.37
TNFRSF6B-201ENST00000369996 KLHL34Q8N239 644 aa29.85■■■□□ 2.37
TNFRSF6B-201ENST00000369996 SYT17Q9BSW7 474 aa29.85■■■□□ 2.37
TNFRSF6B-201ENST00000369996 RTCBQ9Y3I0 505 aaKnown RBP29.85■■■□□ 2.37
TNFRSF6B-201ENST00000369996 RPS6KA4O75676 772 aa29.84■■■□□ 2.37
TNFRSF6B-201ENST00000369996 CYP19A1P11511 503 aaPredicted RBP29.84■■■□□ 2.37
TNFRSF6B-201ENST00000369996 NFE2L2Q16236 605 aa29.84■■■□□ 2.37
TNFRSF6B-201ENST00000369996 ZNF790Q6PG37 636 aa29.84■■■□□ 2.37
TNFRSF6B-201ENST00000369996 RTF1Q92541 710 aaKnown RBP29.84■■■□□ 2.37
TNFRSF6B-201ENST00000369996 ARHGEF1Q92888 912 aaKnown RBP29.84■■■□□ 2.37
TNFRSF6B-201ENST00000369996 HMGB2P26583 209 aaKnown RBP29.83■■■□□ 2.37
TNFRSF6B-201ENST00000369996 CCDC184Q52MB2 194 aa29.82■■■□□ 2.36
TNFRSF6B-201ENST00000369996 TTC5Q8N0Z6 440 aa29.82■■■□□ 2.36
TNFRSF6B-201ENST00000369996 MAPK8IP3Q9UPT6 1336 aa29.81■■■□□ 2.36
TNFRSF6B-201ENST00000369996 BTBD11A6QL63 1104 aa29.81■■■□□ 2.36
TNFRSF6B-201ENST00000369996 TRAPPC3LQ5T215 181 aa29.81■■■□□ 2.36
TNFRSF6B-201ENST00000369996 MIS18AQ9NYP9 233 aa29.81■■■□□ 2.36
TNFRSF6B-201ENST00000369996 C4AP0C0L4 1744 aa29.81■■■□□ 2.36
TNFRSF6B-201ENST00000369996 CCDC87Q9NVE4 849 aa29.8■■■□□ 2.36
TNFRSF6B-201ENST00000369996 SRP68Q9UHB9 627 aaKnown RBP29.8■■■□□ 2.36
TNFRSF6B-201ENST00000369996 HEG1Q9ULI3 1381 aa29.79■■■□□ 2.36
TNFRSF6B-201ENST00000369996 NLGN2Q8NFZ4 835 aa29.79■■■□□ 2.36
TNFRSF6B-201ENST00000369996 ZBTB1Q9Y2K1 713 aa29.79■■■□□ 2.36
TNFRSF6B-201ENST00000369996 HTATSF1O43719 755 aaKnown RBP29.78■■■□□ 2.36
TNFRSF6B-201ENST00000369996 ADAMTS8Q9UP79 889 aa29.78■■■□□ 2.36
TNFRSF6B-201ENST00000369996 RRP7AQ9Y3A4 280 aaKnown RBP29.78■■■□□ 2.36
TNFRSF6B-201ENST00000369996 PRAMEF22A3QJZ6 481 aa29.77■■■□□ 2.36
TNFRSF6B-201ENST00000369996 NEFMP07197 916 aa29.77■■■□□ 2.36
TNFRSF6B-201ENST00000369996 SOS1Q07889 1333 aaPredicted RBP29.76■■■□□ 2.36
TNFRSF6B-201ENST00000369996 VSIG10Q8N0Z9 540 aa29.76■■■□□ 2.35
TNFRSF6B-201ENST00000369996 WDR43Q15061 677 aaKnown RBP eCLIP29.75■■■□□ 2.35
TNFRSF6B-201ENST00000369996 GYS1P13807 737 aa29.74■■■□□ 2.35
TNFRSF6B-201ENST00000369996 ADRA2BP18089 450 aa29.74■■■□□ 2.35
TNFRSF6B-201ENST00000369996 RFC4P35249 363 aa29.73■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms