RNA–Protein interactions for RNA: ENST00000368297.5

LMNA-203, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 1,679 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-203ENST00000368297 C8orf58Q8NAV2 365 aa20.49■□□□□ 0.87
LMNA-203ENST00000368297 SLC52A2Q9HAB3 445 aa20.49■□□□□ 0.87
LMNA-203ENST00000368297 TRPC5Q9UL62 973 aaPredicted RBP20.49■□□□□ 0.87
LMNA-203ENST00000368297 KDM3BQ7LBC6 1761 aa20.49■□□□□ 0.87
LMNA-203ENST00000368297 CABP4P57796 275 aa20.48■□□□□ 0.87
LMNA-203ENST00000368297 TWISTNBQ3B726 338 aaPredicted RBP20.48■□□□□ 0.87
LMNA-203ENST00000368297 ATRNO75882 1429 aa20.48■□□□□ 0.87
LMNA-203ENST00000368297 RRP1P56182 461 aaKnown RBP20.48■□□□□ 0.87
LMNA-203ENST00000368297 TSPYL6Q8N831 410 aa20.48■□□□□ 0.87
LMNA-203ENST00000368297 MRC1P22897 1456 aa20.47■□□□□ 0.87
LMNA-203ENST00000368297 RARSP54136 660 aaKnown RBP20.47■□□□□ 0.87
LMNA-203ENST00000368297 NFATC2IPQ8NCF5 419 aa20.47■□□□□ 0.87
LMNA-203ENST00000368297 GJD4Q96KN9 370 aaPredicted RBP20.47■□□□□ 0.87
LMNA-203ENST00000368297 GLI3P10071 1580 aa20.46■□□□□ 0.87
LMNA-203ENST00000368297 BCAR3O75815 825 aa20.46■□□□□ 0.87
LMNA-203ENST00000368297 IRX6P78412 446 aaPredicted RBP20.46■□□□□ 0.87
LMNA-203ENST00000368297 KRT24Q2M2I5 525 aa20.46■□□□□ 0.87
LMNA-203ENST00000368297 ERVV-2B6SEH9 535 aa20.45■□□□□ 0.86
LMNA-203ENST00000368297 VAMP4O75379 141 aa20.45■□□□□ 0.86
LMNA-203ENST00000368297 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.45■□□□□ 0.86
LMNA-203ENST00000368297 BCL2L13Q9BXK5 485 aa20.45■□□□□ 0.86
LMNA-203ENST00000368297 QTRT2Q9H974 415 aaKnown RBP20.45■□□□□ 0.86
LMNA-203ENST00000368297 TOGARAM1Q9Y4F4 1720 aa20.44■□□□□ 0.86
LMNA-203ENST00000368297 ZNF428Q96B54 188 aa20.44■□□□□ 0.86
LMNA-203ENST00000368297 SMC4Q9NTJ3 1288 aa20.44■□□□□ 0.86
LMNA-203ENST00000368297 KCNQ3O43525 872 aa20.43■□□□□ 0.86
LMNA-203ENST00000368297 THSD7AQ9UPZ6 1657 aa20.42■□□□□ 0.86
LMNA-203ENST00000368297 PLIN1O60240 522 aa20.42■□□□□ 0.86
LMNA-203ENST00000368297 CANXP27824 592 aaKnown RBP20.42■□□□□ 0.86
LMNA-203ENST00000368297 PPP4R2Q9NY27 417 aa20.42■□□□□ 0.86
LMNA-203ENST00000368297 EIF4A1P60842 406 aaKnown RBP20.42■□□□□ 0.86
LMNA-203ENST00000368297 ALDH1L2Q3SY69 923 aa20.42■□□□□ 0.86
LMNA-203ENST00000368297 SSH1Q8WYL5 1049 aa20.42■□□□□ 0.86
LMNA-203ENST00000368297 SLC39A6Q13433 755 aa20.41■□□□□ 0.86
LMNA-203ENST00000368297 TTC5Q8N0Z6 440 aa20.41■□□□□ 0.86
LMNA-203ENST00000368297 MARCH10Q8NA82 808 aaPredicted RBP20.41■□□□□ 0.86
LMNA-203ENST00000368297 TMOD3Q9NYL9 352 aa20.41■□□□□ 0.86
LMNA-203ENST00000368297 ZNF772Q68DY9 489 aaPredicted RBP20.4■□□□□ 0.86
LMNA-203ENST00000368297 FRAT1Q92837 279 aaPredicted RBP20.4■□□□□ 0.86
LMNA-203ENST00000368297 DOT1LQ8TEK3 1739 aa20.4■□□□□ 0.86
LMNA-203ENST00000368297 TCERG1O14776 1098 aaKnown RBP20.39■□□□□ 0.86
LMNA-203ENST00000368297 ZNF790Q6PG37 636 aa20.39■□□□□ 0.86
LMNA-203ENST00000368297 ITGB4P16144 1822 aa20.39■□□□□ 0.85
LMNA-203ENST00000368297 SOS1Q07889 1333 aaPredicted RBP20.38■□□□□ 0.85
LMNA-203ENST00000368297 SYTL4Q96C24 671 aaPredicted RBP20.37■□□□□ 0.85
LMNA-203ENST00000368297 SEPT12Q8IYM1 358 aa20.35■□□□□ 0.85
LMNA-203ENST00000368297 MRPL50Q8N5N7 158 aaKnown RBP20.35■□□□□ 0.85
LMNA-203ENST00000368297 PAPPAQ13219 1627 aa20.35■□□□□ 0.85
LMNA-203ENST00000368297 KIF16BQ96L93 1317 aa20.35■□□□□ 0.85
LMNA-203ENST00000368297 ONECUT3O60422 494 aaPredicted RBP20.35■□□□□ 0.85
LMNA-203ENST00000368297 HOXB7P09629 217 aa20.35■□□□□ 0.85
LMNA-203ENST00000368297 NECTIN2Q92692 538 aa20.35■□□□□ 0.85
LMNA-203ENST00000368297 FMNL2Q96PY5 1086 aa20.35■□□□□ 0.85
LMNA-203ENST00000368297 KAT6BQ8WYB5 2073 aa20.35■□□□□ 0.85
LMNA-203ENST00000368297 PRIM1P49642 420 aaKnown RBP20.34■□□□□ 0.85
LMNA-203ENST00000368297 HDGFL1Q5TGJ6 251 aa20.34■□□□□ 0.85
LMNA-203ENST00000368297 CCDC30Q5VVM6 783 aa20.34■□□□□ 0.85
LMNA-203ENST00000368297 PIGBQ92521 554 aa20.34■□□□□ 0.85
LMNA-203ENST00000368297 ACSBG1Q96GR2 724 aa20.34■□□□□ 0.85
LMNA-203ENST00000368297 STK31Q9BXU1 1019 aa20.34■□□□□ 0.85
LMNA-203ENST00000368297 EIF2S2P20042 333 aaKnown RBP20.33■□□□□ 0.85
LMNA-203ENST00000368297 ZKSCAN2Q63HK3 967 aa20.33■□□□□ 0.85
LMNA-203ENST00000368297 ZNF496Q96IT1 587 aaPredicted RBP20.33■□□□□ 0.85
LMNA-203ENST00000368297 CHMP4AQ9BY43 222 aa20.33■□□□□ 0.85
LMNA-203ENST00000368297 NOB1Q9ULX3 412 aaKnown RBP20.33■□□□□ 0.85
LMNA-203ENST00000368297 GIGYF1O75420 1035 aaPredicted RBP20.32■□□□□ 0.84
LMNA-203ENST00000368297 BCL9O00512 1426 aa20.32■□□□□ 0.84
LMNA-203ENST00000368297 HEG1Q9ULI3 1381 aa20.32■□□□□ 0.84
LMNA-203ENST00000368297 UBR2Q8IWV8 1755 aa20.32■□□□□ 0.84
LMNA-203ENST00000368297 IPO8O15397 1037 aaKnown RBP20.32■□□□□ 0.84
LMNA-203ENST00000368297 RBM6P78332 1123 aaKnown RBP20.32■□□□□ 0.84
LMNA-203ENST00000368297 BRPF1P55201 1214 aaPredicted RBP20.31■□□□□ 0.84
LMNA-203ENST00000368297 C20orf194Q5TEA3 1177 aa20.31■□□□□ 0.84
LMNA-203ENST00000368297 C5P01031 1676 aa20.31■□□□□ 0.84
LMNA-203ENST00000368297 SLC4A2P04920 1241 aa20.3■□□□□ 0.84
LMNA-203ENST00000368297 KCPQ6ZWJ8 1503 aa20.3■□□□□ 0.84
LMNA-203ENST00000368297 PRAMEF22A3QJZ6 481 aa20.29■□□□□ 0.84
LMNA-203ENST00000368297 PTCD1O75127 700 aaKnown RBP20.29■□□□□ 0.84
LMNA-203ENST00000368297 SNRPA1P09661 255 aaKnown RBP20.29■□□□□ 0.84
LMNA-203ENST00000368297 ASAP1Q9ULH1 1129 aa20.29■□□□□ 0.84
LMNA-203ENST00000368297 MS4A1P11836 297 aa20.29■□□□□ 0.84
LMNA-203ENST00000368297 PDE3AQ14432 1141 aa20.29■□□□□ 0.84
LMNA-203ENST00000368297 ATG3Q9NT62 314 aa20.29■□□□□ 0.84
LMNA-203ENST00000368297 FAM182BQ5T319 152 aa20.28■□□□□ 0.84
LMNA-203ENST00000368297 ATF7IPQ6VMQ6 1270 aa20.28■□□□□ 0.84
LMNA-203ENST00000368297 FTSJ3Q8IY81 847 aaKnown RBP20.28■□□□□ 0.84
LMNA-203ENST00000368297 CLUAP1Q96AJ1 413 aa20.28■□□□□ 0.84
LMNA-203ENST00000368297 CRBNQ96SW2 442 aa20.28■□□□□ 0.84
LMNA-203ENST00000368297 TNNQ9UQP3 1299 aa20.28■□□□□ 0.84
LMNA-203ENST00000368297 PANK1Q8TE04 598 aa20.27■□□□□ 0.84
LMNA-203ENST00000368297 LAMB4A4D0S4 1761 aa20.26■□□□□ 0.83
LMNA-203ENST00000368297 DZIP1LQ8IYY4 767 aaKnown RBP20.26■□□□□ 0.83
LMNA-203ENST00000368297 EXOC6Q8TAG9 804 aa20.26■□□□□ 0.83
LMNA-203ENST00000368297 RBM42Q9BTD8 480 aaKnown RBP20.26■□□□□ 0.83
LMNA-203ENST00000368297 BRWD3Q6RI45 1802 aa20.26■□□□□ 0.83
LMNA-203ENST00000368297 CACNA1FO60840 1977 aa20.26■□□□□ 0.83
LMNA-203ENST00000368297 TRIM27P14373 513 aa20.26■□□□□ 0.83
LMNA-203ENST00000368297 RXRBP28702 533 aa20.26■□□□□ 0.83
LMNA-203ENST00000368297 ARHGAP45Q92619 1136 aa20.26■□□□□ 0.83
LMNA-203ENST00000368297 CHPF2Q9P2E5 772 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms