RNA–Protein interactions for RNA: ENST00000368258.7

CCT3-203, Transcript of chaperonin containing TCP1 subunit 3, humanhuman

TSL 2

Gene CCT3, Length 1,885 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT3-203ENST00000368258 RIMS2Q9UQ26 1411 aa14.84□□□□□ -0.03
CCT3-203ENST00000368258 MX1P20591 662 aa14.84□□□□□ -0.03
CCT3-203ENST00000368258 CHAF1AQ13111 956 aaPredicted RBP14.84□□□□□ -0.03
CCT3-203ENST00000368258 OTUD7AQ8TE49 926 aaPredicted RBP14.84□□□□□ -0.03
CCT3-203ENST00000368258 ARID3AQ99856 593 aa14.84□□□□□ -0.03
CCT3-203ENST00000368258 USP25Q9UHP3 1055 aa14.84□□□□□ -0.03
CCT3-203ENST00000368258 KDM4AO75164 1064 aa14.83□□□□□ -0.04
CCT3-203ENST00000368258 CBX1P83916 185 aa14.83□□□□□ -0.04
CCT3-203ENST00000368258 CHAMP1Q96JM3 812 aa14.83□□□□□ -0.04
CCT3-203ENST00000368258 ATP7BP35670 1465 aa14.82□□□□□ -0.04
CCT3-203ENST00000368258 KIAA0232Q92628 1395 aa14.82□□□□□ -0.04
CCT3-203ENST00000368258 CHGAP10645 457 aaKnown RBP14.82□□□□□ -0.04
CCT3-203ENST00000368258 HDGFL2Q7Z4V5 671 aaPredicted RBP14.82□□□□□ -0.04
CCT3-203ENST00000368258 SENP3Q9H4L4 574 aaPredicted RBP14.82□□□□□ -0.04
CCT3-203ENST00000368258 PTPRCP08575 1304 aa14.82□□□□□ -0.04
CCT3-203ENST00000368258 HMMRO75330 724 aa14.82□□□□□ -0.04
CCT3-203ENST00000368258 CEBPAP49715 358 aaPredicted RBP14.82□□□□□ -0.04
CCT3-203ENST00000368258 USP48Q86UV5 1035 aa14.82□□□□□ -0.04
CCT3-203ENST00000368258 ESYT1Q9BSJ8 1104 aa14.82□□□□□ -0.04
CCT3-203ENST00000368258 FUCA2Q9BTY2 467 aa14.82□□□□□ -0.04
CCT3-203ENST00000368258 TTC12Q9H892 705 aaPredicted RBP14.82□□□□□ -0.04
CCT3-203ENST00000368258 PPP6R1Q9UPN7 881 aa14.82□□□□□ -0.04
CCT3-203ENST00000368258 SRPK2P78362 688 aaKnown RBP14.81□□□□□ -0.04
CCT3-203ENST00000368258 FGD1P98174 961 aa14.81□□□□□ -0.04
CCT3-203ENST00000368258 C8orf58Q8NAV2 365 aa14.81□□□□□ -0.04
CCT3-203ENST00000368258 MAP2P11137 1827 aaKnown RBP14.81□□□□□ -0.04
CCT3-203ENST00000368258 SALL3Q9BXA9 1300 aa14.81□□□□□ -0.04
CCT3-203ENST00000368258 GADD45BO75293 160 aaPredicted RBP14.8□□□□□ -0.04
CCT3-203ENST00000368258 PDE1AP54750 535 aa14.8□□□□□ -0.04
CCT3-203ENST00000368258 UBE2HP62256 183 aa14.8□□□□□ -0.04
CCT3-203ENST00000368258 GABPB1Q06547 395 aaPredicted RBP14.8□□□□□ -0.04
CCT3-203ENST00000368258 PHACTR3Q96KR7 559 aa14.8□□□□□ -0.04
CCT3-203ENST00000368258 YTHDC2Q9H6S0 1430 aaKnown RBP14.8□□□□□ -0.04
CCT3-203ENST00000368258 GOLGA6L6A8MZA4 724 aa14.8□□□□□ -0.04
CCT3-203ENST00000368258 OGFRQ9NZT2 677 aa14.8□□□□□ -0.04
CCT3-203ENST00000368258 POLKQ9UBT6 870 aa14.8□□□□□ -0.04
CCT3-203ENST00000368258 TSC1Q92574 1164 aa14.79□□□□□ -0.04
CCT3-203ENST00000368258 JARID2Q92833 1246 aaPredicted RBP14.79□□□□□ -0.04
CCT3-203ENST00000368258 ZNF830Q96NB3 372 aaPredicted RBP14.79□□□□□ -0.04
CCT3-203ENST00000368258 MSH6P52701 1360 aa14.79□□□□□ -0.04
CCT3-203ENST00000368258 TCHHQ07283 1943 aa14.79□□□□□ -0.04
CCT3-203ENST00000368258 AATKQ6ZMQ8 1374 aa14.79□□□□□ -0.04
CCT3-203ENST00000368258 RIOK3O14730 519 aaKnown RBP14.78□□□□□ -0.04
CCT3-203ENST00000368258 IL13P35225 146 aa14.78□□□□□ -0.04
CCT3-203ENST00000368258 FOXD4L5Q5VV16 416 aaPredicted RBP14.78□□□□□ -0.04
CCT3-203ENST00000368258 FOXD4L4Q8WXT5 416 aaPredicted RBP14.78□□□□□ -0.04
CCT3-203ENST00000368258 THUMPD2Q9BTF0 503 aaKnown RBP14.78□□□□□ -0.04
CCT3-203ENST00000368258 HCLS1P14317 486 aaPredicted RBP14.77□□□□□ -0.05
CCT3-203ENST00000368258 ATP6V1DQ9Y5K8 247 aa14.77□□□□□ -0.05
CCT3-203ENST00000368258 AOX1Q06278 1338 aa14.77□□□□□ -0.05
CCT3-203ENST00000368258 A0A0U1RQG5 324 aaPredicted RBP14.76□□□□□ -0.05
CCT3-203ENST00000368258 SMARCA5O60264 1052 aaPredicted RBP14.76□□□□□ -0.05
CCT3-203ENST00000368258 SRCIN1Q9C0H9 1055 aa14.76□□□□□ -0.05
CCT3-203ENST00000368258 KCNF1Q9H3M0 494 aa14.76□□□□□ -0.05
CCT3-203ENST00000368258 CFAP65Q6ZU64 1925 aaKnown RBP14.76□□□□□ -0.05
CCT3-203ENST00000368258 PALD1Q9ULE6 856 aa14.76□□□□□ -0.05
CCT3-203ENST00000368258 NRKQ7Z2Y5 1582 aa14.75□□□□□ -0.05
CCT3-203ENST00000368258 ELL2O00472 640 aaPredicted RBP14.75□□□□□ -0.05
CCT3-203ENST00000368258 ZSCAN22P10073 491 aaPredicted RBP14.75□□□□□ -0.05
CCT3-203ENST00000368258 LTBP4Q8N2S1 1624 aa14.75□□□□□ -0.05
CCT3-203ENST00000368258 CHMLP26374 656 aa14.74□□□□□ -0.05
CCT3-203ENST00000368258 FAM193AP78312 1265 aa14.74□□□□□ -0.05
CCT3-203ENST00000368258 C17orf53Q8N3J3 647 aaPredicted RBP14.74□□□□□ -0.05
CCT3-203ENST00000368258 STAP2Q9UGK3 403 aa14.74□□□□□ -0.05
CCT3-203ENST00000368258 PYCARDQ9ULZ3 195 aa14.74□□□□□ -0.05
CCT3-203ENST00000368258 CEP170BQ9Y4F5 1589 aaPredicted RBP14.74□□□□□ -0.05
CCT3-203ENST00000368258 DLC1Q96QB1 1528 aa14.74□□□□□ -0.05
CCT3-203ENST00000368258 ARHGEF10O15013 1369 aa14.74□□□□□ -0.05
CCT3-203ENST00000368258 SMTNL1A8MU46 457 aa14.74□□□□□ -0.05
CCT3-203ENST00000368258 U2AF2P26368 475 aaKnown RBP eCLIP14.74□□□□□ -0.052e-7■■□□□ 13.4
CCT3-203ENST00000368258 N4BP2Q86UW6 1770 aaPredicted RBP14.73□□□□□ -0.05
CCT3-203ENST00000368258 HSPA4P34932 840 aa14.73□□□□□ -0.05
CCT3-203ENST00000368258 NCBP1Q09161 790 aaKnown RBP14.73□□□□□ -0.05
CCT3-203ENST00000368258 ILDR2Q71H61 639 aa14.73□□□□□ -0.05
CCT3-203ENST00000368258 MEIS3Q99687 375 aa14.73□□□□□ -0.05
CCT3-203ENST00000368258 GDPD2Q9HCC8 539 aa14.73□□□□□ -0.05
CCT3-203ENST00000368258 CGNQ9P2M7 1197 aaKnown RBP14.73□□□□□ -0.05
CCT3-203ENST00000368258 CTNNA3Q9UI47 895 aa14.73□□□□□ -0.05
CCT3-203ENST00000368258 EDC4Q6P2E9 1401 aaKnown RBP14.72□□□□□ -0.05
CCT3-203ENST00000368258 HMOX1P09601 288 aa14.72□□□□□ -0.05
CCT3-203ENST00000368258 CCT4P50991 539 aaKnown RBP14.72□□□□□ -0.05
CCT3-203ENST00000368258 CREBRFQ8IUR6 639 aa14.72□□□□□ -0.05
CCT3-203ENST00000368258 DDX41Q9UJV9 622 aaKnown RBP14.72□□□□□ -0.05
CCT3-203ENST00000368258 CNPY2Q9Y2B0 182 aa14.72□□□□□ -0.05
CCT3-203ENST00000368258 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.72□□□□□ -0.05
CCT3-203ENST00000368258 CHL1O00533 1208 aa14.71□□□□□ -0.05
CCT3-203ENST00000368258 F13A1P00488 732 aa14.71□□□□□ -0.05
CCT3-203ENST00000368258 CCDC192P0DO97 292 aa14.71□□□□□ -0.05
CCT3-203ENST00000368258 PDIA4P13667 645 aaKnown RBP14.71□□□□□ -0.05
CCT3-203ENST00000368258 ANO2Q9NQ90 1003 aa14.71□□□□□ -0.05
CCT3-203ENST00000368258 PAXBP1Q9Y5B6 917 aa14.71□□□□□ -0.05
CCT3-203ENST00000368258 MORC2Q9Y6X9 1032 aaPredicted RBP14.71□□□□□ -0.05
CCT3-203ENST00000368258 SPDYE4A6NLX3 237 aa14.7□□□□□ -0.06
CCT3-203ENST00000368258 AP5Z1O43299 807 aa14.7□□□□□ -0.06
CCT3-203ENST00000368258 STX6O43752 255 aa14.7□□□□□ -0.06
CCT3-203ENST00000368258 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.7□□□□□ -0.06
CCT3-203ENST00000368258 ITSN1Q15811 1721 aa14.7□□□□□ -0.06
CCT3-203ENST00000368258 TMEM131LA2VDJ0 1609 aa14.7□□□□□ -0.06
CCT3-203ENST00000368258 FAM177BA6PVY3 158 aa14.69□□□□□ -0.06
CCT3-203ENST00000368258 FAM200AQ8TCP9 573 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms