RNA–Protein interactions for RNA: ENST00000367630.8

VTA1-202, Transcript of vesicle trafficking 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTA1, Length 7,028 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-202ENST00000367630 RAPGEF4Q8WZA2 1011 aa8.71□□□□□ -1.01
VTA1-202ENST00000367630 RILPL2Q969X0 211 aa8.71□□□□□ -1.01
VTA1-202ENST00000367630 FAM13BQ9NYF5 915 aa8.71□□□□□ -1.01
VTA1-202ENST00000367630 ALKQ9UM73 1620 aa8.71□□□□□ -1.01
VTA1-202ENST00000367630 KRT85P78386 507 aa8.71□□□□□ -1.02
VTA1-202ENST00000367630 TXLNBQ8N3L3 684 aa8.71□□□□□ -1.02
VTA1-202ENST00000367630 PREX1Q8TCU6 1659 aa8.71□□□□□ -1.02
VTA1-202ENST00000367630 GTPBP4Q9BZE4 634 aaKnown RBP8.71□□□□□ -1.02
VTA1-202ENST00000367630 TUBB4BP68371 445 aa8.7□□□□□ -1.02
VTA1-202ENST00000367630 CBFA2T2O43439 604 aa8.7□□□□□ -1.02
VTA1-202ENST00000367630 SULT6B1Q6IMI4 303 aa8.7□□□□□ -1.02
VTA1-202ENST00000367630 MAP3K5Q99683 1374 aa8.7□□□□□ -1.02
VTA1-202ENST00000367630 ADGRB1O14514 1584 aa8.7□□□□□ -1.02
VTA1-202ENST00000367630 WASF1Q92558 559 aa8.7□□□□□ -1.02
VTA1-202ENST00000367630 EVI5LQ96CN4 794 aa8.7□□□□□ -1.02
VTA1-202ENST00000367630 PYM1Q9BRP8 204 aaKnown RBP8.7□□□□□ -1.02
VTA1-202ENST00000367630 SLC4A2P04920 1241 aa8.7□□□□□ -1.02
VTA1-202ENST00000367630 MLECQ14165 292 aa8.7□□□□□ -1.02
VTA1-202ENST00000367630 ANKRD20A12PQ8NF67 263 aa8.7□□□□□ -1.02
VTA1-202ENST00000367630 ARGLU1Q9NWB6 273 aaPredicted RBP8.7□□□□□ -1.02
VTA1-202ENST00000367630 MYOM1P52179 1685 aa8.7□□□□□ -1.02
VTA1-202ENST00000367630 TRIM29Q14134 588 aa8.7□□□□□ -1.02
VTA1-202ENST00000367630 MCTP1Q6DN14 999 aa8.7□□□□□ -1.02
VTA1-202ENST00000367630 CCDC47Q96A33 483 aaKnown RBP8.7□□□□□ -1.02
VTA1-202ENST00000367630 PRIMPOLQ96LW4 560 aa8.7□□□□□ -1.02
VTA1-202ENST00000367630 HDGFL1Q5TGJ6 251 aa8.7□□□□□ -1.02
VTA1-202ENST00000367630 LARP1Q6PKG0 1096 aaKnown RBP8.7□□□□□ -1.02
VTA1-202ENST00000367630 TSR2Q969E8 191 aaKnown RBP8.7□□□□□ -1.02
VTA1-202ENST00000367630 DDX19AQ9NUU7 478 aaKnown RBP8.7□□□□□ -1.02
VTA1-202ENST00000367630 TULP4Q9NRJ4 1543 aa8.69□□□□□ -1.02
VTA1-202ENST00000367630 TATP17735 454 aaPredicted RBP8.69□□□□□ -1.02
VTA1-202ENST00000367630 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.69□□□□□ -1.02
VTA1-202ENST00000367630 TECPR2O15040 1411 aa8.69□□□□□ -1.02
VTA1-202ENST00000367630 ESPNB1AK53 854 aa8.69□□□□□ -1.02
VTA1-202ENST00000367630 GORABQ5T7V8 394 aa8.69□□□□□ -1.02
VTA1-202ENST00000367630 ACBD3Q9H3P7 528 aa8.69□□□□□ -1.02
VTA1-202ENST00000367630 SPATA31D1Q6ZQQ2 1576 aa8.69□□□□□ -1.02
VTA1-202ENST00000367630 C20orf194Q5TEA3 1177 aa8.69□□□□□ -1.02
VTA1-202ENST00000367630 MBIPQ9NS73 344 aa8.69□□□□□ -1.02
VTA1-202ENST00000367630 TEX13AQ9BXU3 409 aaPredicted RBP8.69□□□□□ -1.02
VTA1-202ENST00000367630 ITSN1Q15811 1721 aa8.69□□□□□ -1.02
VTA1-202ENST00000367630 TMEM2Q9UHN6 1383 aa8.69□□□□□ -1.02
VTA1-202ENST00000367630 MYO1BO43795 1136 aa8.69□□□□□ -1.02
VTA1-202ENST00000367630 XBP1P17861 261 aa8.69□□□□□ -1.02
VTA1-202ENST00000367630 TRDNQ13061 729 aa8.69□□□□□ -1.02
VTA1-202ENST00000367630 DBF4Q9UBU7 674 aaPredicted RBP8.69□□□□□ -1.02
VTA1-202ENST00000367630 U3KPZ7 1027 aaPredicted RBP8.69□□□□□ -1.02
VTA1-202ENST00000367630 ARHGEF28Q8N1W1 1705 aaKnown RBP8.69□□□□□ -1.02
VTA1-202ENST00000367630 NLRP6P59044 892 aa8.68□□□□□ -1.02
VTA1-202ENST00000367630 VAMP4O75379 141 aa8.68□□□□□ -1.02
VTA1-202ENST00000367630 ATP8B2P98198 1209 aa8.68□□□□□ -1.02
VTA1-202ENST00000367630 IGHDP01880 384 aa8.68□□□□□ -1.02
VTA1-202ENST00000367630 HMOX1P09601 288 aa8.68□□□□□ -1.02
VTA1-202ENST00000367630 BECN2A8MW95 431 aa8.68□□□□□ -1.02
VTA1-202ENST00000367630 IL13P35225 146 aa8.68□□□□□ -1.02
VTA1-202ENST00000367630 CSB-PGBD3P0DP91 1061 aa8.68□□□□□ -1.02
VTA1-202ENST00000367630 TAF7LQ5H9L4 462 aa8.68□□□□□ -1.02
VTA1-202ENST00000367630 ZSCAN16Q9H4T2 348 aaPredicted RBP8.68□□□□□ -1.02
VTA1-202ENST00000367630 POLKQ9UBT6 870 aa8.68□□□□□ -1.02
VTA1-202ENST00000367630 AKAP2Q9Y2D5 859 aa8.68□□□□□ -1.02
VTA1-202ENST00000367630 RFX7Q2KHR2 1363 aa8.67□□□□□ -1.02
VTA1-202ENST00000367630 TBC1D9Q6ZT07 1266 aa8.67□□□□□ -1.02
VTA1-202ENST00000367630 OSBPL3Q9H4L5 887 aa8.67□□□□□ -1.02
VTA1-202ENST00000367630 LIMCH1Q9UPQ0 1083 aa8.67□□□□□ -1.02
VTA1-202ENST00000367630 KNDC1Q76NI1 1749 aa8.67□□□□□ -1.02
VTA1-202ENST00000367630 TRHP20396 242 aaPredicted RBP8.67□□□□□ -1.02
VTA1-202ENST00000367630 NT5C2P49902 561 aa8.67□□□□□ -1.02
VTA1-202ENST00000367630 NEK4P51957 841 aa8.67□□□□□ -1.02
VTA1-202ENST00000367630 SAFBQ15424 915 aaKnown RBP eCLIP8.67□□□□□ -1.02
VTA1-202ENST00000367630 CCDC70Q6NSX1 233 aa8.67□□□□□ -1.02
VTA1-202ENST00000367630 PLEKHF1Q96S99 279 aa8.67□□□□□ -1.02
VTA1-202ENST00000367630 SMTNL1A8MU46 457 aa8.67□□□□□ -1.02
VTA1-202ENST00000367630 HSP90AB3PQ58FF7 597 aa8.67□□□□□ -1.02
VTA1-202ENST00000367630 GZF1Q9H116 711 aaPredicted RBP8.67□□□□□ -1.02
VTA1-202ENST00000367630 USP25Q9UHP3 1055 aa8.67□□□□□ -1.02
VTA1-202ENST00000367630 OVOS2A0A0G2JMS6 1433 aa8.67□□□□□ -1.02
VTA1-202ENST00000367630 RAPGEF3O95398 923 aa8.67□□□□□ -1.02
VTA1-202ENST00000367630 SF3A1Q15459 793 aaKnown RBP8.67□□□□□ -1.02
VTA1-202ENST00000367630 ZNF445P59923 1031 aa8.66□□□□□ -1.02
VTA1-202ENST00000367630 VIRMAQ69YN4 1812 aaKnown RBP8.66□□□□□ -1.02
VTA1-202ENST00000367630 BRMS1Q9HCU9 246 aa8.66□□□□□ -1.02
VTA1-202ENST00000367630 USP31Q70CQ4 1352 aa8.66□□□□□ -1.02
VTA1-202ENST00000367630 PTPRUQ92729 1446 aa8.66□□□□□ -1.02
VTA1-202ENST00000367630 CPS1P31327 1500 aa8.66□□□□□ -1.02
VTA1-202ENST00000367630 RGS22Q8NE09 1264 aa8.66□□□□□ -1.02
VTA1-202ENST00000367630 ZBTB7BO15156 539 aaPredicted RBP8.66□□□□□ -1.02
VTA1-202ENST00000367630 SURF6O75683 361 aaKnown RBP8.66□□□□□ -1.02
VTA1-202ENST00000367630 TEX35Q5T0J7 233 aa8.66□□□□□ -1.02
VTA1-202ENST00000367630 CLEC17AQ6ZS10 378 aa8.66□□□□□ -1.02
VTA1-202ENST00000367630 AMOTL1Q8IY63 956 aa8.66□□□□□ -1.02
VTA1-202ENST00000367630 ERBB4Q15303 1308 aa8.66□□□□□ -1.02
VTA1-202ENST00000367630 ATP10DQ9P241 1426 aa8.66□□□□□ -1.02
VTA1-202ENST00000367630 CHL1O00533 1208 aa8.66□□□□□ -1.02
VTA1-202ENST00000367630 UBE2HP62256 183 aa8.66□□□□□ -1.02
VTA1-202ENST00000367630 SART3Q15020 963 aaKnown RBP8.66□□□□□ -1.02
VTA1-202ENST00000367630 TNPO1Q92973 898 aaKnown RBP8.66□□□□□ -1.02
VTA1-202ENST00000367630 PHAXQ9H814 394 aaKnown RBP8.66□□□□□ -1.02
VTA1-202ENST00000367630 FAM193AP78312 1265 aa8.66□□□□□ -1.02
VTA1-202ENST00000367630 AKAP4Q5JQC9 854 aa8.66□□□□□ -1.02
VTA1-202ENST00000367630 LRSAM1Q6UWE0 723 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms